Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ddx43

Gene Name Gene ID Reads Annotation
ddx43 ENSDARG00000022614 48 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]










Genes with expression patterns similar to ddx43

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx43 ENSDARG00000022614 48 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]
2. zgc:174700_1 zgc:174700_1 60 3.516 0.977 0.735 0.873 - - 0.931 - - -
3. cdc14aa ENSDARG00000013858 18 1.969 0.977 - 0.992 - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
4. CABZ01080492.1 CABZ01080492.1 495 1.948 0.977 - - - - 0.971 - - -
5. fermt3a fermt3a 56 1.945 0.977 - - - - 0.968 - - -
6. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1.942 0.977 - 0.965 - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
7. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1.863 0.977 - - - - 0.886 - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
8. EHD4 ENSDARG00000054302 46 1.849 0.977 - - - - 0.872 - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
9. wfikkn2b ENSDARG00000059139 45 1.843 - - 0.987 - - 0.856 - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
10. TEKT4 ENSDARG00000028899 47 1.84 - 0.853 0.987 - - - - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
11. mir199-2 mir199-2 38 1.789 - - - - - 0.857 0.932 - -
12. RFFL ENSDARG00000042833 73 1.766 0.871 - 0.895 - - - - - - ring finger and FYVE-like domain containing E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2274]
13. clic2 ENSDARG00000010625, ENSDARG00000110125, ENSDARG00000115320 273 1.748 0.977 - - - - 0.771 - - - chloride intracellular channel 2 [Source:ZFIN;Acc:ZDB-GENE-040718-299]
14. axdnd1 ENSDARG00000062355 30 1.746 - - 0.840 - - - 0.906 - - axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
15. slc10a4 ENSDARG00000009131 51 1.742 0.977 0.765 - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
16. TMEM260 ENSDARG00000076362 63 1.711 0.977 0.734 - - - - - - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
17. efcab2 ENSDARG00000074323 88 1.71 - - 0.818 - - - 0.892 - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
18. si:dkey-199f5.6 ENSDARG00000094400 51 1.71 - - - - - 0.973 0.737 - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
19. DHDH DHDH 15 1.706 - 0.735 - - - 0.971 - - -
20. ptgdsa ENSDARG00000069439, ENSDARG00000109669 289 1.705 - - 0.889 - - 0.816 - - - prostaglandin D2 synthase a [Source:ZFIN;Acc:ZDB-GENE-081022-118]
21. slc6a6a ENSDARG00000012534 183 1.704 - - 0.852 - - - 0.852 - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
22. zgc:174700 zgc:174700 35 1.672 - - 0.824 - - - 0.848 - -
23. si:ch1073-357b18.3 si:ch1073-357b18.3 87 1.654 - 0.754 - - - 0.900 - - -
24. glrx2 ENSDARG00000100944, ENSDARG00000110094 151 1.601 - - - - - 0.874 0.727 - - glutaredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040718-101]
25. GLIS2 GLIS2 141 1.592 - - 0.830 - - 0.762 - - -
26. CT955984.1 ENSDARG00000113577 1482 1.563 - 0.810 - - - - 0.753 - -
27. znf653 ENSDARG00000093469 149 1.551 - - 0.802 - - 0.749 - - - zinc finger protein 653 [Source:ZFIN;Acc:ZDB-GENE-071116-3]
28. kctd1 ENSDARG00000074056 652 1.544 - - 0.785 - - - 0.759 - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
29. PCDH12 ENSDARG00000076594 381 1.481 - - - - - 0.743 0.738 - - protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
30. thg1l ENSDARG00000038360 401 1.475 - 0.729 - - - 0.746 - - - tRNA-histidine guanylyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041114-170]
31. dnal1 ENSDARG00000034042 339 1.459 - - 0.737 - - - 0.722 - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
32. bag5 ENSDARG00000017316 195 1.449 0.711 - 0.738 - - - - - - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
33. rnf24 ENSDARG00000036965 226 1.442 - - - - - 0.721 0.721 - - ring finger protein 24 [Source:ZFIN;Acc:ZDB-GENE-041114-40]
34. si:dkey-148f10.4 ENSDARG00000094627, ENSDARG00000109786 236 1.411 - - 0.701 - - - 0.710 - - si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292]
35. BX640547.1_1 ENSDARG00000092775 76 1 - - - - - 1.000 - - - uncharacterized LOC110439536 [Source:NCBI gene;Acc:110439536]
36. radil ENSDARG00000079779 14 1 - - 1.000 - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
37. ENSDARG00000089996 ENSDARG00000089996 17 0.999 - - 0.999 - - - - - -
38. si:ch1073-312b22.1 si:ch1073-312b22.1 6 0.999 - - 0.999 - - - - - -
39. si:dkey-285e18.5 ENSDARG00000093665 5 0.999 - - 0.999 - - - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
40. Metazoa_SRP_13 Metazoa_SRP_13 7 0.999 - - 0.999 - - - - - -
41. CCL19_1 CCL19_1 40 0.998 0.998 - - - - - - - -
42. tecrl2a ENSDARG00000089485 12 0.998 - - 0.998 - - - - - - trans-2,3-enoyl-CoA reductase-like 2a [Source:ZFIN;Acc:ZDB-GENE-131121-138]
43. si:ch211-188c16.1 ENSDARG00000077288 16 0.998 - - 0.998 - - - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
44. si:ch211-283e2.7 19 0.995 - - 0.995 - - - - - - si:ch211-283e2.7, transcript variant X2
45. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 0.994 - - 0.994 - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
46. fut7 ENSDARG00000044775 25 0.993 - - 0.993 - - - - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
47. dlx1a ENSDARG00000013125 142 0.993 - - - - - 0.993 - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
48. si:dkey-17e16.18 47 0.992 - - 0.992 - - - - - - si:dkey-17e16.18
49. ppp1r3da ENSDARG00000077513 109 0.991 - - 0.991 - - - - - - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
50. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 0.984 - - 0.984 - - - - - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
51. si:ch211-213a13.11 si:ch211-213a13.11 9 0.984 - - - - - 0.984 - - -
52. si:dkeyp-104f11.9 ENSDARG00000096715 81 0.981 - - - - - 0.981 - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
53. ttc12 ENSDARG00000056896 97 0.981 - - 0.981 - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
54. mycbpap ENSDARG00000069194 32 0.98 - - 0.980 - - - - - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
55. cpeb1a ENSDARG00000045932 81 0.98 0.980 - - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
56. c1qa ENSDARG00000044613, ENSDARG00000109639 35 0.98 0.980 - - - - - - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
57. npffr2.1 npffr2.1 60 0.978 - - 0.978 - - - - - -
58. tbx6 ENSDARG00000011785 132 0.978 - - 0.978 - - - - - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
59. TMEM221 TMEM221 62 0.977 0.977 - - - - - - - -
60. cyb561 ENSDARG00000038176 55 0.977 0.977 - - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
61. si:dkey-85n7.8 ENSDARG00000095793 31 0.977 0.977 - - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
62. plekha7a ENSDARG00000060813 179 0.977 0.977 - - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
63. calhm1 ENSDARG00000077021 2 0.977 0.977 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
64. flnb ENSDARG00000092281 10 0.977 0.977 - - - - - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
65. CU984579.1 ENSDARG00000116863 15 0.977 0.977 - - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
66. smpd3 ENSDARG00000098226 1 0.977 0.977 - - - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
67. mettl21a ENSDARG00000012051 86 0.977 0.977 - - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
68. CABZ01085054.1 CABZ01085054.1 20 0.977 0.977 - - - - - - - -
69. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 0.977 0.977 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
70. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 0.977 0.977 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
71. 5S_rRNA_10 5S_rRNA_10 2 0.977 0.977 - - - - - - - -
72. ETS1 ENSDARG00000024431 6 0.977 0.977 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
73. ZBTB40 ENSDARG00000091762 57 0.977 0.977 - - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
74. FP236168.1 FP236168.1 150 0.977 0.977 - - - - - - - -
75. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 0.977 0.977 - - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
76. GLB1L2 ENSDARG00000034941 74 0.977 0.977 - - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
77. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 0.977 0.977 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
78. dcun1d5 ENSDARG00000100363 3 0.977 0.977 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
79. si:ch211-122i22.6 si:ch211-122i22.6 1 0.977 0.977 - - - - - - - -
80. si:dkey-47k16.3 si:dkey-47k16.3 17 0.977 0.977 - - - - - - - -
81. CABZ01006254.1 CABZ01006254.1 95 0.977 0.977 - - - - - - - -
82. vipr1b ENSDARG00000059058 62 0.977 0.977 - - - - - - - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
83. KAZN_1 KAZN_1 13 0.977 0.977 - - - - - - - -
84. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 0.977 0.977 - - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
85. Metazoa_SRP_2 Metazoa_SRP_2 2 0.977 0.977 - - - - - - - -
86. gaa ENSDARG00000090714 19 0.977 0.977 - - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
87. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 0.977 0.977 - - - - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
88. BX323064.1 ENSDARG00000099914 11 0.977 0.977 - - - - - - - -
89. si:dkey-117k10.8 si:dkey-117k10.8 17 0.977 0.977 - - - - - - - -
90. AL807829.1 AL807829.1 2 0.977 0.977 - - - - - - - -
91. crtac1a ENSDARG00000059826 22 0.977 0.977 - - - - - - - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
92. itga2.2 ENSDARG00000062974 27 0.977 0.977 - - - - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
93. ifit2 ifit2 11 0.977 0.977 - - - - - - - -
94. BX119963.1 ENSDARG00000096135 28 0.977 0.977 - - - - - - - -
95. ZBED1_5 ZBED1_5 1 0.977 0.977 - - - - - - - -
96. si:dkey-199m13.6 si:dkey-199m13.6 53 0.977 0.977 - - - - - - - -
97. si:ch73-299h12.1 ENSDARG00000102321 233 0.977 0.977 - - - - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
98. SNORA81_1 SNORA81_1 8 0.977 0.977 - - - - - - - -
99. GRIN3B GRIN3B 16 0.977 0.977 - - - - - - - -
100. cyp19a1b ENSDARG00000098360 8 0.977 0.977 - - - - - - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]

There are 1113 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA