Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ddx42

Gene Name Gene ID Reads Annotation
ddx42 ENSDARG00000037928 1659 DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]










Genes with expression patterns similar to ddx42

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx42 ENSDARG00000037928 1659 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
2. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 2.404 - - - - 0.777 - - 0.897 0.730 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
3. crmp1 ENSDARG00000056742 332 2.387 0.704 - - - - 0.712 - 0.971 - collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
4. shda ENSDARG00000094243 929 1.954 - 0.999 - - - - - 0.955 - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
5. snx27b ENSDARG00000016977 2768 1.952 - 0.998 - - - - - 0.954 - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
6. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.941 - 0.993 - - - - - 0.948 - cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
7. rapgef2 ENSDARG00000005482 2586 1.917 - 0.997 - - - - - 0.920 - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
8. wu:fb54a03 wu:fb54a03 1722 1.864 - 0.998 - - 0.866 - - - -
9. phldb1a ENSDARG00000061093 1637 1.855 - 0.997 - - - 0.858 - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
10. ppfibp2b ENSDARG00000029168 961 1.841 - 0.999 - - - 0.842 - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
11. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.832 - 0.994 - - 0.838 - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
12. ube2f ENSDARG00000025754 1946 1.829 - 0.998 - - 0.831 - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
13. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.825 - - - - 0.859 - - 0.966 - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
14. fhdc1 ENSDARG00000074812 934 1.808 - 0.990 - - 0.818 - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
15. sf3b2 ENSDARG00000018049 4675 1.806 - - - - - 0.830 - 0.976 - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
16. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.8 - 0.999 - - - 0.801 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
17. max ENSDARG00000024844 6035 1.784 - 0.976 - - 0.808 - - - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
18. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 1.776 - 0.961 - - 0.815 - - - - MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
19. crabp1b ENSDARG00000035904 2753 1.774 - 0.994 - - - 0.780 - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
20. ubxn6 ENSDARG00000003087, ENSDARG00000113404 431 1.77 - - - - - 0.803 - 0.967 - UBX domain protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5680]
21. necap2 ENSDARG00000046002 4372 1.768 - - - - 0.822 - - 0.946 - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
22. fndc3ba ENSDARG00000078179 2753 1.765 - - - - 0.851 - - 0.914 - fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]
23. phf3 ENSDARG00000034768 1372 1.762 - - - - - 0.792 - 0.970 - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
24. gsk3b ENSDARG00000017803 3438 1.761 - 0.984 - - 0.777 - - - - glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
25. scaf4a ENSDARG00000077093 2408 1.761 - - - - 0.795 - - 0.966 - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
26. asna1 ENSDARG00000018190 5253 1.758 - 0.973 - - - 0.785 - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
27. uros ENSDARG00000027491 1147 1.747 - - - - - 0.805 - 0.942 - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
28. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 1.74 - 0.998 - - - 0.742 - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
29. mid1ip1l ENSDARG00000018145 2789 1.739 - 0.986 - - 0.753 - - - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
30. fgfr2 ENSDARG00000058115 6743 1.736 - 0.984 - - - 0.752 - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
31. psma4 ENSDARG00000045928 5112 1.735 - - - - 0.906 0.829 - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
32. si:ch73-375g18.1 ENSDARG00000075024 2431 1.731 - 0.993 - - - - 0.738 - - si:ch73-375g18.1 [Source:ZFIN;Acc:ZDB-GENE-110408-56]
33. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.728 - 0.997 - - - 0.731 - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
34. prune2 ENSDARG00000059423, ENSDARG00000116519 646 1.727 - 0.999 - - - 0.728 - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
35. zgc:171566 ENSDARG00000105118 340 1.72 - - - - - 0.752 - 0.968 - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
36. rtf1 ENSDARG00000008947 6596 1.719 - - - - 0.892 - - 0.827 - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
37. ghra ENSDARG00000054771, ENSDARG00000112689 2883 1.716 - 0.992 - - 0.724 - - - - growth hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-070509-1]
38. PIK3CA_1 PIK3CA_1 4065 1.71 - - - - 0.805 - - 0.905 -
39. mat2b ENSDARG00000012932 3146 1.703 - 0.984 - - - - 0.719 - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
40. rps27.2_1 ENSDARG00000055475 2786 1.703 - - - - 0.750 - - 0.953 - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
41. st13 ENSDARG00000021973 7787 1.701 - 0.832 - - - - - 0.869 - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
42. ilvbl ENSDARG00000017126 356 1.69 0.724 - - - - - - 0.966 - ilvB (bacterial acetolactate synthase)-like [Source:ZFIN;Acc:ZDB-GENE-040426-1623]
43. CDKN1C CDKN1C 667 1.685 - - - - - 0.716 - 0.969 -
44. tmem5 1630 1.682 - - - - 0.892 0.790 - - - transmembrane protein 5
45. polb ENSDARG00000003749 2049 1.679 - - - - - 0.714 - 0.965 - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
46. si:ch211-163b2.4 ENSDARG00000094890 140 1.677 - - - - - 0.776 0.901 - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
47. ENSDARG00000086878 ENSDARG00000086878 332 1.67 - - - - 0.868 0.802 - - -
48. lbr ENSDARG00000014013 4835 1.668 - - - - - - - 0.965 0.703 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
49. GRIN2B GRIN2B 140 1.664 - - - - 0.876 0.788 - - -
50. nup210 ENSDARG00000063333 995 1.658 - - - - 0.890 0.768 - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
51. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 1.657 - - - - 0.859 - 0.798 - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
52. neo1 neo1 4056 1.65 - - - - - 0.700 - 0.950 -
53. pi4k2b ENSDARG00000013881 1337 1.645 - - - - 0.847 0.798 - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
54. CR626962.1 ENSDARG00000096981 220 1.641 - - - - 0.875 0.766 - - -
55. arfgap2 ENSDARG00000067601 6801 1.638 - - - - - - 0.749 0.889 - ADP-ribosylation factor GTPase activating protein 2 [Source:ZFIN;Acc:ZDB-GENE-051120-177]
56. spg11 ENSDARG00000045968 542 1.635 - - - - - 0.729 - 0.906 - spastic paraplegia 11 [Source:ZFIN;Acc:ZDB-GENE-101017-1]
57. TNPO2 ENSDARG00000042887 2290 1.622 - - - - 0.724 - - 0.898 - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
58. ppp4r2a ENSDARG00000026540 1782 1.621 - - - - - 0.880 0.741 - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
59. si:ch211-208h1.1 si:ch211-208h1.1 262 1.619 - - - - - 0.837 0.782 - -
60. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.618 - - - - - 0.836 - 0.782 - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
61. si:dkey-183n20.2 si:dkey-183n20.2 210 1.617 - - - - 0.856 0.761 - - -
62. fem1b ENSDARG00000062636 474 1.608 - - - - - 0.708 0.900 - - fem-1 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-071009-3]
63. nedd4l ENSDARG00000060006 1669 1.605 0.778 - - - - 0.827 - - - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
64. si:dkey-37o8.1 ENSDARG00000071727 64 1.599 0.728 - - - 0.871 - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
65. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.597 - - - - 0.842 0.755 - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
66. r3hcc1l ENSDARG00000089243 1254 1.595 - - - - 0.859 0.736 - - - R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]
67. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.594 - - - - 0.773 - - 0.821 - glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
68. znf511 ENSDARG00000000760 446 1.593 - - - 0.739 0.854 - - - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
69. sugp1 ENSDARG00000075936 826 1.592 - - - - 0.882 0.710 - - - SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
70. pafah1b1b ENSDARG00000026595 1822 1.591 - - - - 0.883 - 0.708 - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:ZFIN;Acc:ZDB-GENE-040116-3]
71. anxa13l ENSDARG00000013613 631 1.59 - - - - 0.870 0.720 - - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
72. mn1b ENSDARG00000079248 882 1.58 - - - - 0.852 0.728 - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
73. DTX4 ENSDARG00000076302 2642 1.576 - - - - 0.787 0.789 - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
74. ndst3 ENSDARG00000041776 605 1.576 - - - - - 0.753 0.823 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
75. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.576 - - - - 0.809 0.767 - - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
76. utp18 ENSDARG00000102618 1983 1.575 - - - - 0.789 - 0.786 - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
77. DVL3 1098 1.558 - - - - - 0.818 0.740 - - dishevelled segment polarity protein 3
78. knop1 ENSDARG00000077721 2198 1.551 - - - - 0.761 - 0.790 - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
79. atp5e 14858 1.544 - 0.823 - - - 0.721 - - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
80. pknox2 ENSDARG00000055349 784 1.543 - - - - - 0.785 - 0.758 - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
81. LIN9 ENSDARG00000028475 227 1.542 - - - - - 0.762 0.780 - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
82. pycr1 pycr1 1258 1.541 - - - - - 0.789 0.752 - -
83. crp4 714 1.538 - - - - 0.800 0.738 - - - C-reactive protein 4
84. BX004890.2 BX004890.2 84 1.535 0.731 - - - - 0.804 - - -
85. PMFBP1 ENSDARG00000101917 292 1.533 0.766 - - - - 0.767 - - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
86. cyc1 ENSDARG00000038075 16699 1.531 - 0.788 - - - - - 0.743 - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
87. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.531 - - - - 0.771 0.760 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
88. tomm5 ENSDARG00000068265 11813 1.526 - 0.703 - - 0.823 - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
89. her15.2 her15.2 1701 1.523 - - - - 0.760 0.763 - - -
90. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 1.519 0.740 - - - - 0.779 - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
91. srcap ENSDARG00000005236 1740 1.517 0.708 - - - - 0.809 - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
92. MSL1_1 MSL1_1 2365 1.514 - - - - 0.702 0.812 - - -
93. sp1 ENSDARG00000088347 1697 1.513 - - - - 0.774 0.739 - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
94. commd3 ENSDARG00000045402 1601 1.507 - - - - - 0.783 0.724 - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
95. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.504 - - - - - 0.788 0.716 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
96. rpa3 ENSDARG00000002613 2923 1.501 - - - - 0.768 - 0.733 - - replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
97. bmpr2a ENSDARG00000011941 2972 1.5 - - - - 0.760 0.740 - - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
98. SYMPK ENSDARG00000059553 1159 1.5 - - - - - 0.754 0.746 - - symplekin [Source:ZFIN;Acc:ZDB-GENE-060526-361]
99. PEG3_5 PEG3_5 1624 1.49 0.768 - - - - 0.722 - - -
100. tbc1d5 ENSDARG00000036212 2580 1.487 - - - - 0.742 0.745 - - - TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]

There are 2077 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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