Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ddx41_1

Gene Name Gene ID Reads Annotation
ddx41_1 2 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41










Genes with expression patterns similar to ddx41_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx41_1 2 2 - - - 1.000 - - - - 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
2. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - - 1.000 - - - - -
3. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - 1.000 - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
4. gabrr1 ENSDARG00000043902 1 1 - - - 1.000 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
5. TMEM55B TMEM55B 76 1 - - - 1.000 - - - - -
6. ubald1a ENSDARG00000002362 181 1 - - - 1.000 - - - - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
7. clrn1 ENSDARG00000102890 5 1 - - - 1.000 - - - - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
8. U1_3 U1_3 1 1 - - - 1.000 - - - - -
9. csf3r ENSDARG00000045959 4 1 - - - - - - - - 1.000 colony stimulating factor 3 receptor (granulocyte) [Source:ZFIN;Acc:ZDB-GENE-080104-4]
10. dhh ENSDARG00000037062 3 1 - - - 1.000 - - - - - desert hedgehog [Source:ZFIN;Acc:ZDB-GENE-990714-5]
11. cdkn1bb_1 ENSDARG00000054271 5 1 - - - 1.000 - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
12. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - - 1.000 - - - - -
13. si:ch211-147m20.1 si:ch211-147m20.1 6 1 - - - 1.000 - - - - -
14. AL928852.1 AL928852.1 23 1 - - - 1.000 - - - - -
15. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - 1.000 - - - - -
16. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - 1.000 - - - - -
17. C2 C2 5 1 - - - 1.000 - - - - -
18. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1 - - - 1.000 - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
19. rfx3 ENSDARG00000014550 2 1 - - - 1.000 - - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
20. si:dkey-4c15.11 si:dkey-4c15.11 1 1 - - - - - - - - 1.000
21. hcn3 ENSDARG00000027192 6 0.981 - - - 0.981 - - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 3 [Source:ZFIN;Acc:ZDB-GENE-060503-193]
22. BX323793.3 BX323793.3 7 0.976 - - - 0.976 - - - - -
23. MCOLN2 ENSDARG00000098918 12 0.968 - - - 0.968 - - - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
24. ccdc147 ccdc147 39 0.959 - - - 0.959 - - - - -
25. si:dkey-276l13.5 si:dkey-276l13.5 3 0.941 - - - 0.941 - - - - -
26. U12 U12 14 0.941 - - - 0.941 - - - - -
27. GSTK1 ENSDARG00000056510 14 0.939 - - - 0.939 - - - - - glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298]
28. HIST1H4L ENSDARG00000101249, ENSDARG00000105318, ENSDARG00000105352, ENSDARG00000105353, ENSDARG00000105376, ENSDARG00000105382, ENSDARG00000105409, ENSDARG00000105482, ENSDARG00000110035, ENSDARG00000110152, ENSDARG00000110812, ENSDARG00000111165, ENSDARG00000111247, ENSDARG00000111494, ENSDARG00000111501, ENSDARG00000111619, ENSDARG00000111753, ENSDARG00000112491, ENSDARG00000112528, ENSDARG00000112954, ENSDARG00000114534, ENSDARG00000115054, ENSDARG00000115281, ENSDARG00000115799, ENSDARG00000116781 3 0.929 - - - 0.929 - - - - - histone 1, H4, like [Source:ZFIN;Acc:ZDB-GENE-070927-10]
29. ghdc ENSDARG00000055569 83 0.925 - - - - - - - - 0.925 GH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-165]
30. si:ch211-202m22.1 ENSDARG00000094491 24 0.921 - - - 0.921 - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
31. si:dkey-284e7.2 si:dkey-284e7.2 14 0.918 - - - 0.918 - - - - -
32. galca ENSDARG00000037064 12 0.891 - - - 0.891 - - - - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
33. BX470154.1 ENSDARG00000097801 2 0.891 - - - 0.891 - - - - -
34. neu3.5 ENSDARG00000096368 5 0.889 - - - 0.889 - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
35. C23H1orf192 C23H1orf192 60 0.878 - - - 0.878 - - - - -
36. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 0.876 - - - 0.876 - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
37. INHBE INHBE 95 0.87 - - - 0.870 - - - - -
38. MDH1B ENSDARG00000018008 29 0.869 - - - 0.869 - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
39. cfhl5 ENSDARG00000105052 25 0.868 - - - 0.868 - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
40. BX470224.1 ENSDARG00000092793 22 0.854 - - - 0.854 - - - - -
41. si:dkey-229d2.7 ENSDARG00000092460 15 0.849 - - - 0.849 - - - - - si:dkey-229d2.7 [Source:ZFIN;Acc:ZDB-GENE-060526-265]
42. gdpd5a ENSDARG00000077284 3 0.837 - - - 0.837 - - - - - glycerophosphodiester phosphodiesterase domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-091204-253]
43. CABZ01081747.2 CABZ01081747.2 9 0.834 - - - 0.834 - - - - -
44. si:dkey-72l17.6 ENSDARG00000102008 42 0.83 - - - - - - - - 0.830 si:dkey-72l17.6 [Source:ZFIN;Acc:ZDB-GENE-110913-49]
45. zgc:123068 ENSDARG00000017489 15 0.827 - - - 0.827 - - - - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
46. FETUB ENSDARG00000053973 4 0.818 - - - 0.818 - - - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
47. clic5b_1 ENSDARG00000070584 149 0.816 - - - 0.816 - - - - - chloride intracellular channel 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2542]
48. plcg2 ENSDARG00000068763 102 0.81 - - - 0.810 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
49. CR848814.2 CR848814.2 19 0.81 - - - 0.810 - - - - -
50. si:dkey-43b14.9 si:dkey-43b14.9 1 0.805 - - - - - - - - 0.805
51. GOLT1A ENSDARG00000088933 14 0.805 - - - - - - - - 0.805 golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
52. zgc:174259 ENSDARG00000091136, ENSDARG00000115432 3 0.805 - - - - - - - - 0.805 zgc:174259 [Source:ZFIN;Acc:ZDB-GENE-080213-10]
53. noxa1 ENSDARG00000056047, ENSDARG00000110918, ENSDARG00000112288 7 0.805 - - - - - - - - 0.805 NADPH oxidase activator 1 [Source:ZFIN;Acc:ZDB-GENE-050913-32]
54. si:ch211-196f5.2 ENSDARG00000041492 29 0.805 - - - 0.805 - - - - - si:ch211-196f5.2 [Source:ZFIN;Acc:ZDB-GENE-041014-306]
55. cyp3a65 ENSDARG00000103295 7 0.805 - - - - - - - - 0.805 cytochrome P450, family 3, subfamily A, polypeptide 65 [Source:ZFIN;Acc:ZDB-GENE-050604-1]
56. KCNJ2 KCNJ2 1 0.805 - - - - - - - - 0.805
57. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 0.805 - - - - - - - - 0.805 dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
58. si:dkey-236e20.3 ENSDARG00000071495, ENSDARG00000109868 1 0.805 - - - - - - - - 0.805 si:dkey-236e20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-722]
59. CR774199.1 CR774199.1 1 0.805 - - - - - - - - 0.805
60. CU695006.1 CU695006.1 4 0.805 - - - - - - - - 0.805
61. rgs9a ENSDARG00000037925 3 0.805 - - - - - - - - 0.805 regulator of G protein signaling 9a [Source:ZFIN;Acc:ZDB-GENE-060929-92]
62. casp8l1 2 0.805 - - - - - - - - 0.805 caspase 8, apoptosis-related cysteine peptidase, like 1, transcript variant X1
63. znf330 ENSDARG00000020494 3 0.805 - - - - - - - - 0.805 zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]
64. akap1a ENSDARG00000089802 5 0.805 - - - - - - - - 0.805 A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
65. si:dkey-233e3.2 3 0.805 - - - - - - - - 0.805 si:dkey-233e3.2, transcript variant X1
66. chrnb2a ENSDARG00000008674, ENSDARG00000115778 1 0.805 - - - - - - - - 0.805 cholinergic receptor, nicotinic, beta 2a [Source:ZFIN;Acc:ZDB-GENE-090312-169]
67. cacng3a ENSDARG00000058460 2 0.805 - - - - - - - - 0.805 calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
68. slc25a1a ENSDARG00000057110 6 0.805 - - - - - - - - 0.805 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1172]
69. U1_19 U1_19 1 0.805 - - - - - - - - 0.805
70. DHPS ENSDARG00000003270 85 0.805 - - - - - - - - 0.805 deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
71. CABZ01015475.1 ENSDARG00000104841 6 0.805 - - - - - - - - 0.805 jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
72. CABZ01049025.1 CABZ01049025.1 1 0.805 - - - - - - - - 0.805
73. ftr08 ENSDARG00000077412 1 0.805 - - - - - - - - 0.805 finTRIM family, member 8 [Source:ZFIN;Acc:ZDB-GENE-070912-230]
74. si:ch211-152p23.2 ENSDARG00000094519 4 0.805 - - - - - - - - 0.805 si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
75. gpr12 ENSDARG00000062934 7 0.805 - - - - - - - - 0.805 G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
76. si:dkey-16i5.8 ENSDARG00000096722 1 0.805 - - - - - - - - 0.805 si:dkey-16i5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1207]
77. frmd4bb ENSDARG00000076496 18 0.805 - - - - - - - - 0.805 FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
78. rundc3b ENSDARG00000009961 10 0.805 - - - - - - - - 0.805 RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
79. phc2b ENSDARG00000013224 3 0.805 - - - - - - - - 0.805 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
80. NAGK ENSDARG00000099116 6 0.805 - - - - - - - - 0.805 N-acetylglucosamine kinase [Source:ZFIN;Acc:ZDB-GENE-070928-19]
81. si:ch211-106h4.4 ENSDARG00000093629 9 0.805 - - - - - - - - 0.805 si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]
82. MYRFL ENSDARG00000101645 15 0.805 - - - - - - - - 0.805 myelin regulatory factor like [Source:ZFIN;Acc:ZDB-GENE-180312-1]
83. tlr1 ENSDARG00000100649 2 0.805 - - - - - - - - 0.805 toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]
84. NOD1 ENSDARG00000036308 1 0.805 - - - - - - - - 0.805 nucleotide-binding oligomerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-9]
85. CDHR5 CDHR5 2 0.805 - - - - - - - - 0.805
86. ECM1_1 ECM1_1 4 0.805 - - - - - - - - 0.805
87. si:dkeyp-33e11.1 6 0.805 - - - - - - - - 0.805 si:dkeyp-33e11.1, transcript variant X3
88. syt15 ENSDARG00000079926 8 0.805 - - - - - - - - 0.805 synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
89. si:dkey-46g23.3 si:dkey-46g23.3 16 0.805 - - - - - - - - 0.805
90. CU469313.1 CU469313.1 1 0.805 - - - - - - - - 0.805
91. si:ch211-208k15.1 ENSDARG00000088650 11 0.792 - - - 0.792 - - - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
92. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 0.786 - - - 0.786 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
93. CU693480.1 CU693480.1 51 0.784 - - - - - - - - 0.784
94. rccd1_1 ENSDARG00000071074 24 0.782 - - - 0.782 - - - - - RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
95. si:ch211-213a13.11 si:ch211-213a13.11 9 0.773 - - - - - - - - 0.773
96. si:dkey-14i17.2 si:dkey-14i17.2 10 0.772 - - - 0.772 - - - - -
97. wu:fb63a08 38 0.77 - - - - - - - - 0.770 wu:fb63a08
98. ITGA2 ITGA2 40 0.767 - - - 0.767 - - - - -
99. TNRC6C TNRC6C 5 0.757 - - - - - - - - 0.757
100. nphs2 ENSDARG00000042850 31 0.757 - - - 0.757 - - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]

There are 19 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA