Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ddx39ab

Gene Name Gene ID Reads Annotation
ddx39ab ENSDARG00000015111 11619 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]










Genes with expression patterns similar to ddx39ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx39ab ENSDARG00000015111 11619 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
2. eif4h ENSDARG00000042252 6742 4.696 0.759 0.725 0.854 - - - 0.863 0.732 0.763 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
3. g3bp1 ENSDARG00000017741 7622 3.849 - 0.731 - - - 0.713 0.851 0.840 0.714 GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
4. whsc1l1 8544 3.844 0.708 - - - - 0.737 0.813 0.712 0.874 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
5. rbm25 rbm25 3629 3.788 - - 0.759 0.718 - 0.717 0.804 - 0.790
6. tox ENSDARG00000032317 9126 3.39 - - - - 0.995 - 0.764 0.829 0.802 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
7. hmgb3a ENSDARG00000056725 15668 3.178 - 0.748 - - - 0.702 0.883 - 0.845 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
8. kif22 ENSDARG00000102624 3694 3.134 - - - 0.718 - 0.715 0.890 - 0.811 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
9. smarca4 smarca4 9726 3.098 0.787 - 0.776 - - 0.749 0.786 - -
10. tmem35 ENSDARG00000052567 5685 3.083 - - - - - 0.717 0.770 0.788 0.808 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
11. hnrnpr ENSDARG00000014569 3423 3.062 - - 0.809 0.710 - 0.722 0.821 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
12. khsrp ENSDARG00000026489 15738 3.044 - - - - - 0.724 0.828 0.790 0.702 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
13. nop58 ENSDARG00000104353 8497 3.044 0.760 0.793 - - - - 0.781 - 0.710 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
14. stmn1a ENSDARG00000004169 21169 3.007 0.735 - 0.700 - - - 0.812 - 0.760 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
15. RSF1_2 RSF1_2 1343 2.908 - - 0.744 - - - 0.738 0.701 0.725
16. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.535 - - - - - - 0.862 0.831 0.842 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
17. hnrpl 6412 2.53 - - - - - 0.869 0.900 - 0.761 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
18. hnrnpub ENSDARG00000004735 16496 2.526 0.727 - - - - - 0.909 - 0.890 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
19. nr2f2 ENSDARG00000040926 5213 2.505 - - - - - 0.865 0.804 0.836 - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
20. zgc:77262 ENSDARG00000044545 5563 2.503 - 0.805 - - - - 0.808 0.890 - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
21. znf865 ENSDARG00000036698 15532 2.468 - - - - - 0.723 0.896 - 0.849 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
22. snrpf ENSDARG00000105037 10241 2.459 0.792 - - - - - 0.901 0.766 - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
23. hdac1 ENSDARG00000015427 19804 2.443 - - - - - 0.724 - 0.821 0.898 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
24. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.443 - - - 0.773 - 0.803 0.867 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
25. lypla2 ENSDARG00000053656 8971 2.425 - - 0.796 - - - 0.877 - 0.752 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
26. myef2 ENSDARG00000059398 6050 2.418 - 0.871 - - - - 0.795 - 0.752 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
27. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 2.418 - - - - - - 0.735 0.883 0.800 small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
28. rbb4 rbb4 15541 2.414 - - - - - 0.730 0.835 - 0.849
29. tgif1 ENSDARG00000059337 4020 2.395 - - - - - - 0.859 0.780 0.756 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
30. cltcb ENSDARG00000090716 5544 2.394 - - - 0.720 - 0.779 0.895 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
31. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 2.393 - - 0.833 - - 0.766 - - 0.794 protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
32. anp32e ENSDARG00000054804 11017 2.391 - 0.724 0.834 - - - 0.833 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
33. tmpob ENSDARG00000022978 8121 2.385 - - - - - - 0.816 0.803 0.766 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
34. SNRPG ENSDARG00000099667 18697 2.382 - 0.719 - - - - 0.857 - 0.806 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
35. eif4a3 ENSDARG00000102978 16162 2.382 - - 0.827 0.716 - - - 0.839 - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
36. znf292b ENSDARG00000043973 3791 2.38 - - - - - 0.711 0.873 0.796 - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
37. pias4a ENSDARG00000007081 4264 2.377 - - - - - 0.730 0.825 - 0.822 protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
38. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.377 - - - - - 0.749 0.821 0.807 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
39. marcksa ENSDARG00000004049 2518 2.374 - - - - - 0.733 0.822 - 0.819 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
40. ppm1g ENSDARG00000075559 6516 2.374 - - - 0.701 - 0.814 - - 0.859 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
41. rbmx ENSDARG00000014244 3445 2.369 - 0.843 - - - - 0.743 - 0.783 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
42. MAP4K4 ENSDARG00000098670 4665 2.365 0.756 - - 0.847 - - - - 0.762 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
43. hnrnpm ENSDARG00000061735 19428 2.364 - - - 0.709 - - - 0.886 0.769 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
44. nrarpb ENSDARG00000018958 6225 2.357 - - - - - - 0.756 0.815 0.786 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
45. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.354 - - 0.791 - - - 0.831 - 0.732 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
46. pou3f3a ENSDARG00000042032 2835 2.349 - - 0.762 - - - 0.806 - 0.781 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
47. lsm7 ENSDARG00000058328 7191 2.348 - - 0.866 - - 0.774 - - 0.708 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
48. lmnb1 ENSDARG00000044299 9817 2.346 - - 0.866 - - 0.755 0.725 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
49. CYTH2 ENSDARG00000028800 2349 2.338 - - - - - - 0.796 0.807 0.735 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
50. zmiz1a ENSDARG00000074502 3920 2.336 0.751 - - - - 0.752 0.833 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
51. rtca ENSDARG00000002215 3558 2.333 - - - - - 0.728 0.799 - 0.806 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
52. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.332 - - - - - 0.729 0.842 - 0.761 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
53. pfdn4 ENSDARG00000061228 8266 2.327 - - 0.785 0.737 - - 0.805 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
54. TNRC6C_2 TNRC6C_2 2444 2.325 - 0.726 - - - - 0.762 0.837 -
55. sumo3a ENSDARG00000028119 13447 2.322 0.708 - - - - - 0.821 - 0.793 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
56. CR936437.1 CR936437.1 6465 2.32 - - - - - - 0.713 0.861 0.746
57. cx43.4 ENSDARG00000007099 16369 2.32 0.735 - 0.810 - - 0.775 - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
58. apex1 ENSDARG00000045843 6345 2.315 0.758 0.713 - - - - 0.844 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
59. zgc:174906 ENSDARG00000075314 2187 2.314 - - - - - 0.724 0.810 0.780 - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
60. uba1 ENSDARG00000037559 11579 2.308 0.702 - - - - 0.721 0.885 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
61. KIF4A KIF4A 3322 2.304 - - - - - 0.821 0.728 - 0.755
62. pacsin1b ENSDARG00000042128 1051 2.302 - - - 0.718 - - 0.747 0.837 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
63. cdc42 ENSDARG00000044573 11795 2.297 - 0.722 0.836 - - - - 0.739 - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
64. smarca5 ENSDARG00000052348 15433 2.293 - - - - - 0.773 0.715 - 0.805 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
65. smarcb1b ENSDARG00000011594 2413 2.286 - - - 0.711 - 0.725 - - 0.850 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
66. CBFA2T3 ENSDARG00000079012 6799 2.284 - - - - - 0.704 0.819 0.761 - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
67. rtf1 ENSDARG00000008947 6596 2.284 - - 0.802 - - 0.726 - - 0.756 RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
68. ilf2 ENSDARG00000014591 14543 2.281 0.714 - - 0.789 - - - - 0.778 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
69. smek1 ENSDARG00000042187 3509 2.279 - 0.779 - - - - 0.759 - 0.741 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
70. cnn3b ENSDARG00000029856 4807 2.279 0.735 - - - - 0.738 0.806 - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
71. ddx19 ENSDARG00000005699 4602 2.272 - - - - - 0.737 0.833 - 0.702 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
72. si:ch73-21k16.6 si:ch73-21k16.6 4896 2.268 0.744 - - - - 0.731 0.793 - -
73. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 2.259 - 0.702 - - - - - 0.813 0.744 immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
74. ncl ENSDARG00000002710 16951 2.256 - 0.714 0.784 - - - - - 0.758 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
75. gpm6bb ENSDARG00000001676 2005 2.255 - - 0.721 - - - - 0.773 0.761 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
76. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 2.252 - - - - - 0.718 0.809 - 0.725 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
77. carm1 ENSDARG00000018698 5599 2.251 - - - 0.753 - 0.766 0.732 - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
78. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 2.251 - 0.790 - - - - 0.722 - 0.739 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
79. creb1a ENSDARG00000053586 5068 2.247 - - - - - 0.740 0.722 - 0.785 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
80. cbx3a ENSDARG00000003860 4922 2.246 - 0.740 - - - - - 0.798 0.708 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
81. caprin1b ENSDARG00000054272 7033 2.243 - - - - - 0.718 0.737 - 0.788 cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
82. dnajc5aa ENSDARG00000042948 2885 2.223 - - 0.737 - - - 0.782 - 0.704 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
83. zranb2 ENSDARG00000044332 6723 2.223 - - 0.758 0.718 - - - - 0.747 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
84. cks1b ENSDARG00000007971 2739 2.208 - - 0.765 - - - 0.717 - 0.726 CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
85. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 2.205 - - 0.736 - - - 0.704 0.765 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
86. xpo1b ENSDARG00000063229 2529 2.2 - - 0.721 - - 0.767 - 0.712 - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
87. nap1l4b ENSDARG00000068868 3285 2.199 - - 0.719 - - 0.714 0.766 - - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
88. phb ENSDARG00000057414 9551 2.198 0.709 - 0.748 - - - 0.741 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
89. nhlh2 ENSDARG00000025495 1860 2.179 - - - - - 0.701 0.726 - 0.752 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
90. puf60b ENSDARG00000001241 13827 2.168 - - - 0.732 - 0.728 - - 0.708 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
91. pcdh1gc5 ENSDARG00000104826 10052 2.166 - - - 0.710 - - 0.756 0.700 - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
92. C8H1orf106 C8H1orf106 2690 2.162 - - - - - 0.708 0.700 - 0.754
93. zgc:101846 15202 2.156 0.701 - - - - - - 0.708 0.747 zgc:101846
94. hmgb3b ENSDARG00000006408 3442 2.132 0.723 0.701 - - - - 0.708 - - high mobility group box 3b [Source:ZFIN;Acc:ZDB-GENE-050417-290]
95. ppm1da ENSDARG00000009273 7713 1.84 - - - - 0.993 0.847 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
96. ddx21 ENSDARG00000063626 6695 1.816 0.820 - - - 0.996 - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
97. strap ENSDARG00000007405 6426 1.763 - 0.771 - - 0.992 - - - - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
98. HNRNPAB HNRNPAB 22267 1.756 - - - - - - 0.917 - 0.839
99. fam60al 2846 1.74 - - - - - - 0.849 - 0.891 family with sequence similarity 60, member A, like
100. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.739 - - 0.858 - - - 0.881 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]

There are 1892 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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