Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ddx39aa

Gene Name Gene ID Reads Annotation
ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]










Genes with expression patterns similar to ddx39aa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
2. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 3.458 - - 0.813 - 0.969 - 0.837 - 0.839 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
3. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 3.217 0.762 - - - 0.929 - 0.779 - 0.747 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
4. khsrp ENSDARG00000026489 15738 2.58 - - - 0.843 - - 0.920 - 0.817 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
5. KDM6B KDM6B 10265 2.558 - - - - 0.907 - 0.844 - 0.807
6. prelid1a ENSDARG00000098671 4745 2.553 - 0.762 - 0.957 - - - 0.834 - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
7. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 2.534 - - - - 0.933 - - 0.790 0.811 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
8. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 2.494 - - 0.720 0.932 - - - - 0.842 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
9. MKI67 ENSDARG00000091150 11038 2.484 0.719 - - - - - 0.896 - 0.869 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
10. stmn1a ENSDARG00000004169 21169 2.395 0.730 0.786 - - - - 0.879 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
11. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 2.325 - - - - - - 0.723 0.877 0.725 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
12. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.308 - - - - 0.764 - 0.810 - 0.734 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
13. snrpd3l ENSDARG00000076283 7655 2.304 - - 0.767 - - - - 0.823 0.714 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
14. rnps1 ENSDARG00000116743 9994 2.3 - - 0.722 - - - 0.767 0.811 - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
15. rpa3 ENSDARG00000002613 2923 2.277 - 0.717 0.756 - - 0.804 - - - replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
16. znf292b ENSDARG00000043973 3791 2.231 - - - - 0.786 - 0.716 - 0.729 zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
17. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 2.23 0.779 - 0.709 - - - 0.742 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
18. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.223 0.801 - - - 0.715 - - - 0.707 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
19. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 2.209 - 0.705 0.780 - - - - 0.724 - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
20. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.143 - - 0.706 - - - 0.728 - 0.709 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
21. arf6b ENSDARG00000052928 4585 1.885 - - - 0.967 0.918 - - - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
22. nup155 ENSDARG00000001777 3417 1.829 - - - 0.976 - - 0.853 - - nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
23. anapc16 ENSDARG00000013822 5857 1.784 - - - 0.947 - - - 0.837 - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
24. arih2 ENSDARG00000012848 7087 1.78 - - - 0.969 - - 0.811 - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
25. stmn1b ENSDARG00000033655 9491 1.767 - - - - 0.910 - - - 0.857 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
26. cuedc1b ENSDARG00000054748 1638 1.751 - - - - 0.922 - - 0.829 - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
27. ankhd1 ENSDARG00000077860 5510 1.747 - - - 0.976 - - 0.771 - - ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
28. bcar1 ENSDARG00000056525 6563 1.745 - - - 0.963 - - - 0.782 - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
29. ost4 ENSDARG00000096118 7679 1.743 - 0.774 - 0.969 - - - - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
30. SSBP4 ENSDARG00000056483 5156 1.735 - - - - - - 0.839 0.896 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
31. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.731 - - - - 0.939 0.792 - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
32. slc1a5 ENSDARG00000099186 7580 1.725 - - - 0.971 - - - 0.754 - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
33. mrgbp ENSDARG00000028894, ENSDARG00000110790 1316 1.711 - - - - 0.928 - 0.783 - - MRG/MORF4L binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1698]
34. ndrg2 ENSDARG00000011170 11442 1.711 - - - 0.956 - - - 0.755 - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
35. CABZ01055343.2 CABZ01055343.2 10312 1.711 - - 0.763 - 0.948 - - - -
36. ube2a ENSDARG00000098466 12765 1.706 - - - - 0.847 - - 0.859 - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
37. tra2a ENSDARG00000007863 4449 1.704 - - - - 0.950 - - - 0.754 transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
38. srsf6b ENSDARG00000016783 9926 1.702 - - - - - - 0.861 - 0.841 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
39. RANBP3 RANBP3 2513 1.699 - - - - 0.951 - - - 0.748
40. meis1 meis1 6937 1.695 0.718 - - 0.977 - - - - -
41. efnb3b ENSDARG00000042277 5823 1.692 - - - - 0.893 - - 0.799 - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
42. TNRC6A ENSDARG00000079688 14433 1.689 - - - 0.944 - - 0.745 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
43. chd4b ENSDARG00000025789 14299 1.684 0.761 - - - 0.923 - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
44. znf207a ENSDARG00000015538 2630 1.681 - - - - 0.907 - - - 0.774 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
45. ckap5 ENSDARG00000102674 5068 1.68 - - 0.724 - 0.956 - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
46. man1b1 man1b1 3294 1.674 - - - 0.965 - 0.709 - - -
47. sumo3a ENSDARG00000028119 13447 1.674 - - - - - - 0.848 - 0.826 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
48. nmt1a ENSDARG00000052966 5918 1.672 - - - - 0.935 - - 0.737 - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
49. hnrnpk ENSDARG00000018914 8841 1.671 - - - - 0.952 - 0.719 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
50. HNRNPAB HNRNPAB 22267 1.67 - - - - - - 0.803 - 0.867
51. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.67 - - - - 0.943 - 0.727 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
52. pik3cb ENSDARG00000075253 2075 1.666 - - - - 0.929 0.737 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
53. IM:7163548 IM:7163548 6540 1.664 - - - - 0.940 - 0.724 - -
54. pebp1 ENSDARG00000042069 6651 1.663 - - - - - - - 0.888 0.775 phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
55. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.662 - - - - - - 0.820 - 0.842 protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
56. CDCA4 ENSDARG00000042319 7918 1.662 - - 0.714 - 0.948 - - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
57. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.66 - - - - 0.949 - 0.711 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
58. mta2 ENSDARG00000013031 2932 1.653 - - - - - - 0.797 - 0.856 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
59. C10H5orf28 C10H5orf28 339 1.65 - - - - - 0.842 0.808 - -
60. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.645 - - - - 0.935 - - - 0.710 SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
61. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.644 - - - - - - - 0.922 0.722 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
62. serpinh1a ENSDARG00000075954 6488 1.641 - - - - 0.865 - - 0.776 - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
63. MAP4K4 ENSDARG00000098670 4665 1.638 - - - - 0.928 - - - 0.710 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
64. C6H2orf40 C6H2orf40 4224 1.636 - 0.723 - - 0.913 - - - -
65. rnaseka ENSDARG00000069461 10304 1.627 - - - - 0.826 - - 0.801 - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
66. cbx5 ENSDARG00000061187 24026 1.625 - - - - 0.917 - 0.708 - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
67. tubb4b ENSDARG00000002344 30333 1.623 - - 0.728 0.895 - - - - - tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
68. hnrpl 6412 1.621 - - - - - - 0.813 - 0.808 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
69. gpm6ab ENSDARG00000004621 5825 1.619 - - - - 0.917 - - - 0.702 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
70. smarcd1 ENSDARG00000019004 6028 1.614 - - - - - - 0.838 - 0.776 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
71. cahz ENSDARG00000011166 5771 1.613 - - - 0.912 - - - 0.701 - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
72. CR936437.1 CR936437.1 6465 1.604 - - - - - - 0.770 - 0.834
73. gatad2ab ENSDARG00000006192 2461 1.603 - - - - - - - 0.837 0.766 GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
74. ilf2 ENSDARG00000014591 14543 1.6 - - 0.781 - - - - - 0.819 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
75. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.599 0.818 - - - - - 0.781 - - phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
76. bzw1a ENSDARG00000010481 28451 1.598 0.711 - - - - - - - 0.887 basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
77. msi1 ENSDARG00000010710 2634 1.59 - - 0.745 - - - - - 0.845 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
78. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 1.588 - - - - - - - 0.746 0.842 nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
79. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.585 0.753 - - - - - - - 0.832 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
80. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.585 - - - - - - 0.731 0.854 - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
81. pbx4 ENSDARG00000052150 35676 1.581 - 0.804 - - - - 0.777 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
82. tmsb ENSDARG00000054911 6411 1.58 - - - - - - - 0.770 0.810 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
83. map2k6 ENSDARG00000099184 8741 1.579 - 0.736 - - - - - 0.843 - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
84. atf7ip ENSDARG00000069619 5495 1.578 - - - - - 0.746 0.832 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
85. rbb4 rbb4 15541 1.575 - - 0.792 - - - - - 0.783
86. hoxb10a ENSDARG00000011579 2135 1.572 - - - - - - 0.823 0.749 - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
87. nr2f6b ENSDARG00000003165 5855 1.57 - - - - - - 0.798 0.772 - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
88. usp1 ENSDARG00000056414 1816 1.567 - - - - - - 0.721 0.846 - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
89. gins1 ENSDARG00000007624 1421 1.565 - - 0.718 - - - - 0.847 - GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
90. atp6v1h ENSDARG00000006370 7028 1.558 - - - - - - 0.722 0.836 - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
91. safb ENSDARG00000020467 5608 1.555 - 0.848 - - - - - - 0.707 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
92. st6gal2 st6gal2 1570 1.554 0.727 - - - - - - 0.827 -
93. rrm1 ENSDARG00000014017 7296 1.55 - - - - - - 0.736 - 0.814 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
94. hmgb3a ENSDARG00000056725 15668 1.55 - 0.731 - - - - - - 0.819 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
95. rabep1 ENSDARG00000059600, ENSDARG00000110933 1003 1.544 - - - - - 0.765 0.779 - - rabaptin, RAB GTPase binding effector protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-165]
96. zgc:171971 ENSDARG00000042054 388 1.542 - - - - - 0.759 - 0.783 - zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
97. AGAP3 ENSDARG00000087822 4128 1.541 - - - - - - 0.796 - 0.745 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-110927-1]
98. CABZ01111990.1 CABZ01111990.1 4374 1.54 - - 0.738 - - - - - 0.802
99. SERBP1 SERBP1 9276 1.54 - - - - 0.763 - 0.777 - -
100. slbp ENSDARG00000100558 3405 1.536 - - 0.730 - - - - - 0.806 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]

There are 1204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA