Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ddx19

Gene Name Gene ID Reads Annotation
ddx19 ENSDARG00000005699 4602 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]










Genes with expression patterns similar to ddx19

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx19 ENSDARG00000005699 4602 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
2. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 3.227 - - - - 0.979 0.725 - 0.811 0.712 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
3. NRD1 NRD1 3486 2.651 - 0.993 - - 0.872 - - 0.786 -
4. safb ENSDARG00000020467 5608 2.579 - - - - 0.861 - - 0.893 0.825 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
5. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.552 0.885 - - - 0.893 - 0.774 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
6. arid1aa ENSDARG00000101710 3644 2.542 - - - - 0.986 0.791 - - 0.765 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
7. sumo3a ENSDARG00000028119 13447 2.531 - 0.986 - - - 0.801 - - 0.744 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
8. sf3a1 ENSDARG00000041887 6702 2.522 - 0.897 - - - - - 0.833 0.792 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
9. pbx2 ENSDARG00000019717 6892 2.48 0.763 0.992 - - - - 0.725 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
10. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 2.463 - 0.959 - - - - - 0.796 0.708 cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
11. kifc1 ENSDARG00000001558 6658 2.459 - - - - 0.962 0.797 0.700 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
12. mcm2 ENSDARG00000102798 8148 2.451 - 0.994 - - - - - 0.711 0.746 minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
13. hnrnpub ENSDARG00000004735 16496 2.442 - 0.904 - - - - 0.787 - 0.751 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
14. tcf7l1b ENSDARG00000007369 2785 2.382 - - - - - 0.792 0.817 - 0.773 transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
15. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.376 - 0.924 - - - 0.706 0.746 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
16. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.375 - - - - - 0.750 0.807 0.818 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
17. cdk6 ENSDARG00000070228 1778 2.374 - - - - 0.896 0.765 - - 0.713 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
18. RNF38 ENSDARG00000062055 3901 2.355 - - - - 0.895 0.725 0.735 - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
19. ptenb ENSDARG00000056623 5783 2.34 - - - - 0.771 0.820 - 0.749 - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
20. srrm1 ENSDARG00000001244 4972 2.323 - - 0.701 - 0.913 - 0.709 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
21. ACVR2B 6615 2.296 - - - - 0.778 0.765 - 0.753 - activin A receptor, type IIB
22. msl2a ENSDARG00000038909 1357 2.29 - - - - - 0.791 0.738 - 0.761 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
23. puf60a ENSDARG00000032175 5618 2.286 - - 0.766 - - - 0.771 - 0.749 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
24. ddx39ab ENSDARG00000015111 11619 2.272 - - - - - 0.737 0.833 - 0.702 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
25. h2afy2_1 ENSDARG00000087897 9887 2.271 - - - - 0.803 0.719 - 0.749 - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
26. ubap2 ubap2 4167 2.269 - - 0.707 - - - 0.830 - 0.732
27. actr1 ENSDARG00000011611 3879 2.269 - - - - - 0.750 0.805 0.714 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
28. rtca ENSDARG00000002215 3558 2.261 - - 0.749 - - 0.718 - - 0.794 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
29. h2afva ENSDARG00000068820 16427 2.257 - - - 0.704 0.831 0.722 - - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
30. plcg1 ENSDARG00000038442 5324 2.256 - - - - 0.762 - 0.725 0.769 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
31. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.252 - - 0.749 - - 0.720 - - 0.783 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
32. ilf2 ENSDARG00000014591 14543 2.232 - - 0.745 - 0.759 - - - 0.728 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
33. nxf1 ENSDARG00000055076 3251 2.23 - - - - - 0.722 0.756 - 0.752 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
34. hdac1 ENSDARG00000015427 19804 2.223 - - 0.705 - - 0.801 - - 0.717 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
35. top2a ENSDARG00000024488 4273 2.222 - - - - - 0.757 0.716 - 0.749 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
36. u2af2b ENSDARG00000011740 6946 2.213 - - 0.706 0.700 - - 0.807 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
37. ncapd2 ENSDARG00000005058 2819 2.186 - - 0.720 - - - 0.756 - 0.710 non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
38. MAP4K4 ENSDARG00000098670 4665 2.185 - - 0.712 - - 0.732 - - 0.741 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
39. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 2.158 - - 0.709 - - 0.740 - - 0.709 nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
40. PRRG1 ENSDARG00000043283 2779 2.147 - - - - - 0.701 0.709 0.737 - proline rich Gla (G-carboxyglutamic acid) 1 [Source:ZFIN;Acc:ZDB-GENE-041010-20]
41. rbms3 ENSDARG00000044574 2514 2.145 - - - - - 0.721 0.722 - 0.702 RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
42. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.128 - - - - - 0.705 0.716 - 0.707 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
43. pmm2 ENSDARG00000037654 1783 1.878 - 0.990 - - 0.888 - - - - phosphomannomutase 2 [Source:ZFIN;Acc:ZDB-GENE-030722-6]
44. gars ENSDARG00000059070 17015 1.84 - - - - 0.980 - 0.860 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
45. nr4a1 ENSDARG00000000796, ENSDARG00000109473 1072 1.824 - 0.990 - - - - 0.834 - - nuclear receptor subfamily 4, group A, member 1 [Source:ZFIN;Acc:ZDB-GENE-040704-11]
46. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.804 - 0.987 - - - - - 0.817 - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
47. khsrp ENSDARG00000026489 15738 1.804 - 0.984 - - - 0.820 - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
48. cand1 ENSDARG00000017841 8164 1.793 - - - - 0.884 0.909 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
49. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.792 - 0.947 - - - - 0.845 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
50. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.789 - 0.987 - - - - 0.802 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
51. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 1.779 - 0.994 - - - - 0.785 - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
52. api5 ENSDARG00000033597 6655 1.779 - - - - 0.988 0.791 - - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
53. CCDC106 CCDC106 1908 1.771 - - - - 0.899 - - 0.872 -
54. e2f7 ENSDARG00000008986 1439 1.771 - - - - 0.896 - - 0.875 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
55. ddx27 ENSDARG00000091831 1471 1.752 - 0.993 - - - - - 0.759 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
56. BX324201.1 BX324201.1 3302 1.746 - 0.994 - - - - 0.752 - -
57. swi5 ENSDARG00000078492 1299 1.74 0.750 0.990 - - - - - - - SWI5 homologous recombination repair protein [Source:ZFIN;Acc:ZDB-GENE-091204-368]
58. ATXN7 ENSDARG00000074804 1137 1.738 - - - - 0.985 - - 0.753 - ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]
59. desi2 ENSDARG00000004460 1593 1.734 - - - - 0.894 - 0.840 - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
60. tubb5 ENSDARG00000037997 18691 1.734 - 0.994 - - 0.740 - - - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
61. tuba8l3 ENSDARG00000070155 7525 1.733 - 0.996 - - - 0.737 - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
62. ebag9 ENSDARG00000040021 2217 1.733 0.749 0.984 - - - - - - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
63. ppm1la ENSDARG00000063218 2142 1.727 - - - - 0.899 - 0.828 - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
64. notch1b ENSDARG00000052094 7874 1.725 - 0.991 - - - - - 0.734 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
65. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.722 - - - - 0.911 - 0.811 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
66. hadhab ENSDARG00000060594 3664 1.718 - 0.994 - - - - 0.724 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
67. clstn1 ENSDARG00000031720 5286 1.714 - - - - 0.931 - 0.783 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
68. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.709 - 0.989 - - - 0.720 - - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
69. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.707 - 0.992 - - - - 0.715 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
70. PSIP1 PSIP1 5252 1.706 - - - - 0.853 - 0.853 - -
71. calm1b ENSDARG00000034187 13158 1.702 - 0.976 - - 0.726 - - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
72. lsm6 ENSDARG00000036995 4377 1.696 - - - - - - 0.927 0.769 - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
73. MAPRE2 ENSDARG00000099943 3041 1.69 - - - - 0.890 - 0.800 - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
74. znf865 ENSDARG00000036698 15532 1.685 - - - - - 0.810 0.875 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
75. elavl1 11672 1.682 - - 0.776 - - 0.906 - - - ELAV like RNA binding protein 1, transcript variant X3
76. tcea1 ENSDARG00000003531 2912 1.681 - - - - - 0.884 - 0.797 - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
77. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.672 - - - - 0.817 - 0.855 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
78. FP016176.1 FP016176.1 7030 1.67 - - - - 0.969 0.701 - - -
79. ZNF609 ZNF609 2176 1.668 - - - - 0.935 - 0.733 - -
80. sf3a3 ENSDARG00000100114 4511 1.668 - - - - - - 0.820 0.848 - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
81. zgc:55733 ENSDARG00000103845 1550 1.665 - - - - - - 0.822 0.843 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
82. hsf2 ENSDARG00000053097 1188 1.664 - - - - 0.896 - - 0.768 - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
83. C1H4orf27 C1H4orf27 1961 1.658 - - - - - - 0.807 0.851 -
84. prmt1 ENSDARG00000010246 11311 1.655 - - - - - 0.757 - 0.898 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
85. pik3r1 ENSDARG00000038524 3615 1.653 - - - - 0.898 - - 0.755 - phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-1280]
86. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.645 - - - - - 0.760 0.885 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
87. ftsjd2 ftsjd2 2694 1.639 - - - - 0.901 - 0.738 - -
88. nucks1a ENSDARG00000078473 28285 1.639 - - 0.802 - - 0.837 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
89. hif1an ENSDARG00000031915 2098 1.638 - - - - - - 0.834 0.804 - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
90. prpf40a ENSDARG00000058467 6565 1.636 - 0.807 - - - - - - 0.829 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
91. apex1 ENSDARG00000045843 6345 1.632 - - - - - - 0.833 0.799 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
92. chd2 ENSDARG00000060687 3832 1.632 - - - - 0.895 0.737 - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
93. TIMM21 ENSDARG00000071594 722 1.632 - - - - 0.898 - 0.734 - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
94. USMG5 USMG5 10356 1.631 - - - - 0.816 - 0.815 - -
95. larsb ENSDARG00000019280 3924 1.63 - 0.848 - - - - 0.782 - - leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
96. lppr3a lppr3a 1294 1.623 - - - - 0.896 - - - 0.727
97. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.622 - - 0.793 - - 0.829 - - - proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
98. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.622 - - - - 0.898 - 0.724 - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
99. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.621 - - - - 0.897 - 0.724 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
100. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.614 - - - - - - 0.810 - 0.804 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]

There are 1981 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA