Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ddx18

Gene Name Gene ID Reads Annotation
ddx18 ENSDARG00000030789 3631 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-030131-9685]










Genes with expression patterns similar to ddx18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx18 ENSDARG00000030789 3631 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-030131-9685]
2. KIAA0355 3250 1.601 - 0.813 - - - 0.788 - - - KIAA0355 ortholog, transcript variant X1
3. uck2b ENSDARG00000022213 1542 1.601 0.737 0.864 - - - - - - - uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
4. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.595 - 0.861 - - - - 0.734 - - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
5. ncl ENSDARG00000002710 16951 1.592 - 0.741 - - - - - - 0.851 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
6. plcg1 ENSDARG00000038442 5324 1.571 - 0.856 - - - - - 0.715 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
7. slc25a14 ENSDARG00000026680, ENSDARG00000113197 2387 1.567 - 0.836 - - - - 0.731 - - solute carrier family 25 (mitochondrial carrier, brain), member 14 [Source:ZFIN;Acc:ZDB-GENE-040426-749]
8. rbb4l ENSDARG00000015208 5542 1.567 - 0.836 0.731 - - - - - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
9. CNOT4_1 CNOT4_1 697 1.539 0.727 - - - - - 0.812 - -
10. glrx5 ENSDARG00000043665 2687 1.534 - - - - - - 0.739 0.795 - glutaredoxin 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1957]
11. nop58 ENSDARG00000104353 8497 1.528 - - - - - - 0.800 - 0.728 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
12. tmem33 ENSDARG00000041332 2883 1.525 - 0.716 - - - - 0.809 - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
13. znf503 ENSDARG00000018492 5974 1.522 0.765 - - - - - 0.757 - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
14. pfdn6 ENSDARG00000037108 2083 1.514 - 0.794 - - - 0.720 - - - prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]
15. ahsa1 ahsa1 2012 1.48 - 0.743 - - - 0.737 - - -
16. snrpd3l ENSDARG00000076283 7655 1.479 - - 0.765 - - - - - 0.714 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
17. gorasp2 ENSDARG00000015126 3923 1.458 0.755 0.703 - - - - - - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
18. brd1b ENSDARG00000051798 1712 1.458 - 0.752 - - - - - - 0.706 bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
19. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.454 - - 0.724 - - - - - 0.730 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
20. ilf2 ENSDARG00000014591 14543 1.45 - - 0.740 - - - - - 0.710 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
21. crkl ENSDARG00000028699 2966 1.449 - 0.726 - - - - - 0.723 - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
22. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.448 - - - - - - 0.722 - 0.726 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
23. SENP1 SENP1 1122 1.439 - - - - - - - 0.719 0.720
24. creb1a ENSDARG00000053586 5068 1.433 - - - - 0.709 - - - 0.724 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
25. gpia ENSDARG00000012987 4624 1.432 - - - - - - 0.710 0.722 - glucose-6-phosphate isomerase a [Source:ZFIN;Acc:ZDB-GENE-020513-2]
26. rb1 ENSDARG00000006782 1445 1.422 - 0.711 - - - - - 0.711 - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
27. ppih ENSDARG00000041530 2085 1.418 - - 0.713 0.705 - - - - - peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
28. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.408 - 0.703 - 0.705 - - - - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
29. eprs ENSDARG00000060494 4729 0.913 - 0.913 - - - - - - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
30. immt ENSDARG00000102874 3435 0.907 - 0.907 - - - - - - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
31. ALDH1L2 ENSDARG00000070230 2550 0.902 - 0.902 - - - - - - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
32. mrpl15 ENSDARG00000101306 2796 0.891 - 0.891 - - - - - - - mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
33. larp1b ENSDARG00000061169 9939 0.889 - 0.889 - - - - - - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
34. ppp3r1b ENSDARG00000069360 2814 0.888 - 0.888 - - - - - - - protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b [Source:ZFIN;Acc:ZDB-GENE-040912-18]
35. fryl ENSDARG00000040001 3256 0.888 - 0.888 - - - - - - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
36. baxa ENSDARG00000020623, ENSDARG00000089129 2611 0.887 - 0.887 - - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
37. psat1 ENSDARG00000016733 8084 0.883 - 0.883 - - - - - - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
38. LLPH ENSDARG00000055360 1456 0.876 - 0.876 - - - - - - - LLP homolog, long-term synaptic facilitation factor [Source:ZFIN;Acc:ZDB-GENE-051030-30]
39. psmg2 ENSDARG00000035987 1938 0.874 - - - - - - - 0.874 - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
40. cdon ENSDARG00000061328 1441 0.866 - - - - - - - 0.866 - cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-021115-4]
41. cept1b ENSDARG00000021177 675 0.863 - - - - - - - 0.863 - choline/ethanolamine phosphotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-071004-33]
42. ssbp1 ENSDARG00000039350 809 0.859 - - - - - - - 0.859 - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
43. TMEM150A TMEM150A 975 0.859 - - - - - - - 0.859 -
44. mrps25 ENSDARG00000041306 3654 0.857 - 0.857 - - - - - - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
45. nfatc2ip ENSDARG00000011360 603 0.855 - - - - - - - 0.855 - nuclear factor of activated T cells 2 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-9520]
46. ftsjd2 ftsjd2 2694 0.851 - 0.851 - - - - - - -
47. bub1bb ENSDARG00000074927 1667 0.847 - - - - - - - 0.847 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
48. CU463857.1 CU463857.1 5541 0.847 - 0.847 - - - - - - -
49. dvl2 ENSDARG00000056184 1525 0.846 - - - - - - - 0.846 - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
50. tsc1b ENSDARG00000057918 738 0.842 - 0.842 - - - - - - - TSC complex subunit 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3404]
51. PPP1R9B PPP1R9B 855 0.842 - - - - - - - 0.842 -
52. CR388231.3 ENSDARG00000105601 2404 0.841 - - - - - - - 0.841 -
53. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 0.84 - - - - - - - 0.840 - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
54. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 0.838 - 0.838 - - - - - - - survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
55. aldh7a1 ENSDARG00000018426 4637 0.837 - 0.837 - - - - - - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
56. plxnb1a ENSDARG00000075821 1702 0.837 - 0.837 - - - - - - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
57. clic4 ENSDARG00000022995 6064 0.831 - 0.831 - - - - - - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
58. slc35d1a ENSDARG00000011973 670 0.83 - - - - - - - 0.830 - solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1a [Source:ZFIN;Acc:ZDB-GENE-040826-5]
59. FAM171A2 FAM171A2 707 0.829 - - - - - - - 0.829 -
60. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 0.828 0.828 - - - - - - - - max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
61. nol9 ENSDARG00000077751 2471 0.827 - 0.827 - - - - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
62. zgc:110626 ENSDARG00000053159 1124 0.827 - - - - - - - 0.827 - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
63. zgc:66475 ENSDARG00000099519 1348 0.826 - - - - - - - 0.826 - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
64. synpo2lb ENSDARG00000078696 2361 0.826 - 0.826 - - - - - - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
65. RSL1D1 ENSDARG00000055868, ENSDARG00000115696 3825 0.825 - 0.825 - - - - - - - ribosomal L1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130603-67]
66. zic1 ENSDARG00000015567 2520 0.825 - - - - - - - 0.825 - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
67. ppp3ca ENSDARG00000004988 615 0.825 - - - - - - - 0.825 - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
68. fbl ENSDARG00000053912 5891 0.824 0.824 - - - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
69. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 0.824 - 0.824 - - - - - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
70. snrpa1 ENSDARG00000024651 3306 0.824 - - - - - - - 0.824 - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
71. ppp2r1b ppp2r1b 3469 0.823 - 0.823 - - - - - - -
72. pcnp ENSDARG00000037713 2754 0.822 - 0.822 - - - - - - - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
73. FHOD3 FHOD3 422 0.822 - 0.822 - - - - - - -
74. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 0.821 - - - - - - - 0.821 - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
75. vbp1 ENSDARG00000030241 10619 0.821 - 0.821 - - - - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
76. TMEM14A ENSDARG00000095157 611 0.821 - - - - - - - 0.821 - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
77. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 0.82 - - - - - - - 0.820 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
78. mrps31 ENSDARG00000057855, ENSDARG00000110763 1981 0.819 - 0.819 - - - - - - - mitochondrial ribosomal protein S31 [Source:ZFIN;Acc:ZDB-GENE-030131-3715]
79. MRPL18 ENSDARG00000060199, ENSDARG00000110565, ENSDARG00000112114 1364 0.817 - 0.817 - - - - - - - mitochondrial ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-061013-632]
80. thrap3b ENSDARG00000098228 4396 0.817 - 0.817 - - - - - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
81. snrpd1 ENSDARG00000011648 8615 0.816 - - 0.816 - - - - - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
82. gspt1l ENSDARG00000098627 8381 0.816 - 0.816 - - - - - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
83. ddx56 ENSDARG00000020913 1070 0.815 - 0.815 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
84. EIF2B5 ENSDARG00000074995 1277 0.815 - - - - - - 0.815 - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
85. psma8 ENSDARG00000010965 8321 0.814 - 0.814 - - - - - - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
86. CABZ01080590.2 CABZ01080590.2 2038 0.814 - 0.814 - - - - - - -
87. ncl1 2835 0.813 - - - - - 0.813 - - - nicalin, transcript variant X3
88. rnd3a ENSDARG00000076799 4705 0.813 - - - - - - - 0.813 - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
89. pdzd4 175 0.813 - - - - - - - 0.813 - PDZ domain containing 4, transcript variant X2
90. C19H18orf21_1 C19H18orf21_1 1657 0.812 - 0.812 - - - - - - -
91. gnb4b ENSDARG00000115383 7457 0.812 - 0.812 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
92. cdc42ep3 ENSDARG00000052783 1485 0.812 - 0.812 - - - - - - - CDC42 effector protein (Rho GTPase binding) 3 [Source:ZFIN;Acc:ZDB-GENE-040912-89]
93. tmem30aa ENSDARG00000030236 2842 0.811 - - - - - - - 0.811 - transmembrane protein 30Aa [Source:ZFIN;Acc:ZDB-GENE-040704-26]
94. brd3b ENSDARG00000100129 6387 0.811 - 0.811 - - - - - - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
95. lsm6 ENSDARG00000036995 4377 0.811 - 0.811 - - - - - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
96. ZNF576 ZNF576 1447 0.809 - - - - - - - 0.809 -
97. CABZ01034082.1 ENSDARG00000099583 2237 0.808 - - - - - - 0.808 - -
98. msi2b ENSDARG00000032614 3095 0.808 - - - - - - 0.808 - - musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]
99. bmpr1ba ENSDARG00000104100 828 0.807 - 0.807 - - - - - - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
100. robo3 ENSDARG00000005645 2818 0.807 - 0.807 - - - - - - - roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]

There are 750 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA