Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ddx11

Gene Name Gene ID Reads Annotation
ddx11 ENSDARG00000011072 325 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:ZFIN;Acc:ZDB-GENE-041114-191]










Genes with expression patterns similar to ddx11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx11 ENSDARG00000011072 325 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:ZFIN;Acc:ZDB-GENE-041114-191]
2. cyp2k16 ENSDARG00000102981 560 1.802 - - - - - - 0.893 0.909 - cytochrome P450, family 2, subfamily K, polypeptide16 [Source:ZFIN;Acc:ZDB-GENE-041010-37]
3. prom1a ENSDARG00000039966 227 1.744 0.820 - - - - - - 0.924 - prominin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1577]
4. atp1b2b ENSDARG00000034424, ENSDARG00000113354 56 1.733 - - - - - - 0.848 0.885 - ATPase Na+/K+ transporting subunit beta 2b [Source:ZFIN;Acc:ZDB-GENE-010718-1]
5. secisbp2 ENSDARG00000073892 79 1.723 - - - - - - 0.813 0.910 - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
6. fam175a fam175a 224 1.665 - 0.792 - - - - - 0.873 -
7. TBC1D17 ENSDARG00000005927 163 1.635 - - - - - - 0.739 0.896 - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
8. ankmy2a ENSDARG00000005948 141 1.615 - 0.863 - - - - 0.752 - - ankyrin repeat and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6321]
9. klhl22 ENSDARG00000088807 324 1.604 - - 0.756 - - - - 0.848 - kelch-like family member 22 [Source:ZFIN;Acc:ZDB-GENE-081104-154]
10. exd2 ENSDARG00000016117 342 1.581 - 0.709 - - - - - 0.872 - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
11. unc93a ENSDARG00000041554 427 1.573 - - - - - - 0.709 0.864 - unc-93 homolog A [Source:ZFIN;Acc:ZDB-GENE-041014-304]
12. pax3a ENSDARG00000010192 626 1.548 - 0.726 - - - - - 0.822 - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
13. phospho2 ENSDARG00000102202 612 1.547 - - - - - 0.737 0.810 - - phosphatase, orphan 2 [Source:ZFIN;Acc:ZDB-GENE-080204-104]
14. GLIPR1 GLIPR1 37 1.545 - - 0.763 - - - - - 0.782
15. si:ch211-255g12.7 si:ch211-255g12.7 44 1.543 - 0.786 - - - - 0.757 - -
16. zgc:174563 zgc:174563 198 1.519 - 0.796 - 0.723 - - - - -
17. olig3 ENSDARG00000074253 84 1.507 - - 0.724 - - - - - 0.783 oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]
18. chm ENSDARG00000003845 498 1.498 - 0.714 - - - - - - 0.784 choroideremia (Rab escort protein 1) [Source:ZFIN;Acc:ZDB-GENE-030318-2]
19. SMG9 ENSDARG00000076627 525 1.494 - 0.782 - - - - - 0.712 - smg9 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9385]
20. trpt1 ENSDARG00000037628 1081 1.491 - - - - - 0.731 - 0.760 - tRNA phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050227-16]
21. zgc:113030 ENSDARG00000069869 53 1.486 - - - - - - 0.720 - 0.766 zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
22. ccdc82 ENSDARG00000014966 563 1.464 - 0.763 - - - - - 0.701 - coiled-coil domain containing 82 [Source:ZFIN;Acc:ZDB-GENE-030131-5749]
23. mthfd1a ENSDARG00000018266 286 0.936 - - - - - - 0.936 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1a, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:ZFIN;Acc:ZDB-GENE-041001-127]
24. angptl1 angptl1 82 0.935 - - - - - - - 0.935 -
25. tfb1m ENSDARG00000040727 142 0.935 - - - - - - - 0.935 - transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]
26. FP236810.2 ENSDARG00000113218 140 0.935 - - - - - - - 0.935 - UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
27. Mar-03 Mar-03 44 0.934 - - - - - - - 0.934 -
28. si:dkey-270b7.1 si:dkey-270b7.1 83 0.933 - - - - - - - 0.933 -
29. spata17 ENSDARG00000054414 64 0.932 - - - - - - - 0.932 - spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]
30. si:ch211-232m19.4 19 0.931 - - - - - - - 0.931 - si:ch211-232m19.4
31. NINJ1 ENSDARG00000103663 43 0.931 - - - - - - - 0.931 - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
32. si:dkey-117k10.8 si:dkey-117k10.8 17 0.931 - - - - - - - 0.931 -
33. oprd1b ENSDARG00000037159 21 0.931 - - - - - - - 0.931 - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
34. LRRC73 ENSDARG00000063411 52 0.931 - - - - - - - 0.931 - leucine rich repeat containing 73 [Source:ZFIN;Acc:ZDB-GENE-111118-2]
35. si:ch1073-357b18.3 si:ch1073-357b18.3 87 0.931 - - - - - - - 0.931 -
36. CR392354.1 CR392354.1 20 0.93 - - - - - - - 0.930 -
37. epha6 ENSDARG00000022971 52 0.93 - - - - - - - 0.930 - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
38. si:ch211-196c10.13 ENSDARG00000096756 28 0.93 - - - - - - - 0.930 - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
39. kl ENSDARG00000079862 13 0.93 - - - - - - - 0.930 - klotho [Source:ZFIN;Acc:ZDB-GENE-110221-1]
40. rca2.2 ENSDARG00000095512 13 0.93 - - - - - - - 0.930 - regulator of complement activation group 2 gene 2 [Source:ZFIN;Acc:ZDB-GENE-060503-646]
41. BX927314.1 BX927314.1 47 0.93 - - - - - - - 0.930 -
42. crfb16 ENSDARG00000075181 40 0.93 - - - - - - - 0.930 - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
43. si:ch73-6k14.2 ENSDARG00000096031 16 0.93 - - - - - - - 0.930 - si:ch73-6k14.2 [Source:ZFIN;Acc:ZDB-GENE-110914-243]
44. si:ch211-71k14.1 ENSDARG00000087061 48 0.93 - - - - - - - 0.930 - si:ch211-71k14.1 [Source:ZFIN;Acc:ZDB-GENE-110411-283]
45. crybb2 ENSDARG00000053512 15 0.93 - - - - - - - 0.930 - crystallin, beta B2 [Source:ZFIN;Acc:ZDB-GENE-060130-1]
46. CT027623.1 ENSDARG00000094538 13 0.93 - - - - - - - 0.930 - si:dkey-65l23.1 [Source:NCBI gene;Acc:101885466]
47. CELA1_1 CELA1_1 104 0.929 - - - - - - - 0.929 -
48. CR391962.1 CR391962.1 31 0.929 - - - - - - - 0.929 -
49. GALNT9 ENSDARG00000006832 120 0.929 - - - - - - - 0.929 - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
50. ABCC3 ENSDARG00000096662 15 0.929 - - - - - - - 0.929 - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
51. si:dkey-220o21.5 si:dkey-220o21.5 24 0.928 - - - - - - - 0.928 -
52. si:zfos-979f1.2 ENSDARG00000011652 24 0.928 - - - - - - - 0.928 - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
53. cpa2 ENSDARG00000010146 28 0.928 - - - - - - - 0.928 - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
54. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 0.927 - - - - - - - 0.927 - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
55. pdia2 ENSDARG00000018263 74 0.927 - - - - - - - 0.927 - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
56. RAPGEF4 ENSDARG00000079872 82 0.927 - - - - - - - 0.927 - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
57. desi1a ENSDARG00000033140 92 0.927 - - - - - - - 0.927 - desumoylating isopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1657]
58. ENSDARG00000086653 ENSDARG00000086653 14 0.927 - - - - - - - 0.927 -
59. CU694372.1 ENSDARG00000097988 105 0.925 - - - - - - - 0.925 -
60. CT583723.1 ENSDARG00000102759 14 0.925 - - - - - - - 0.925 - transmembrane protein 132C [Source:NCBI gene;Acc:100332191]
61. grpr ENSDARG00000056620 66 0.925 - - - - - - - 0.925 - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
62. CABZ01068473.1 CABZ01068473.1 67 0.925 - - - - - - - 0.925 -
63. im:6903943 im:6903943 26 0.924 - - - - - - - 0.924 -
64. si:ch211-64c10.1 si:ch211-64c10.1 21 0.924 - - - - - - - 0.924 -
65. NCKAP1L ENSDARG00000075748 129 0.923 - - - - - - - 0.923 - NCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]
66. il2rb ENSDARG00000075720 116 0.922 - - - - - - - 0.922 - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
67. zgc:173577 ENSDARG00000098923 71 0.922 - - - - - - - 0.922 - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
68. mgat5 ENSDARG00000071506 324 0.922 - - - - - - - 0.922 - alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-060616-238]
69. tnk2a ENSDARG00000090646 133 0.922 - - - - - - - 0.922 - tyrosine kinase, non-receptor, 2a [Source:ZFIN;Acc:ZDB-GENE-091118-85]
70. guca1d ENSDARG00000044629, ENSDARG00000115722 22 0.922 - - - - - - - 0.922 - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
71. ADAM12 ENSDARG00000116062 35 0.922 - - - - - - - 0.922 - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
72. si:ch211-198k9.10 si:ch211-198k9.10 47 0.922 - - - - - - - 0.922 -
73. zgc:92630 ENSDARG00000004141, ENSDARG00000113420 147 0.921 - - - - - - - 0.921 - zgc:92630 [Source:ZFIN;Acc:ZDB-GENE-040718-449]
74. BAI1_1 BAI1_1 57 0.921 - - - - - - - 0.921 -
75. si:ch211-191j22.8 ENSDARG00000057039 20 0.92 - - - - - - - 0.920 - si:ch211-191j22.8 [Source:ZFIN;Acc:ZDB-GENE-091204-10]
76. b3galtlb b3galtlb 27 0.92 - - - - - - - 0.920 -
77. dab2ipb ENSDARG00000075110, ENSDARG00000117186 414 0.92 - - - - - - - 0.920 - DAB2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-030131-2449]
78. zgc:175008 zgc:175008 55 0.92 - - - - - - - 0.920 -
79. csrnp1a ENSDARG00000031426 225 0.92 - - - - - - - 0.920 - cysteine-serine-rich nuclear protein 1a [Source:ZFIN;Acc:ZDB-GENE-070912-475]
80. si:ch73-257c13.2 ENSDARG00000074305 197 0.918 - - - - - - - 0.918 - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
81. KCNAB1 KCNAB1 918 0.918 - - - - - - - 0.918 -
82. zgc:173617 zgc:173617 114 0.918 - - - - - - - 0.918 -
83. zgc:165515 ENSDARG00000116300 182 0.917 - - - - - - - 0.917 - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
84. ZC3H12A_1 ZC3H12A_1 558 0.917 - - - - - - - 0.917 -
85. kcnj1a.3 ENSDARG00000086248 398 0.917 - - - - - - - 0.917 - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050420-256]
86. HMGXB4_1 HMGXB4_1 1122 0.917 - - - - - - - 0.917 -
87. fam184a ENSDARG00000014081 93 0.917 - - - - - - - 0.917 - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
88. ftsjd1 ftsjd1 137 0.916 - - - - - - - 0.916 -
89. ATP6AP1L ATP6AP1L 164 0.916 - - - - - - - 0.916 -
90. VPRBP VPRBP 727 0.916 - - - - - - - 0.916 -
91. rgs7bpa ENSDARG00000060601 138 0.915 - - - - - - - 0.915 - regulator of G protein signaling 7 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060929-380]
92. kcnk13a ENSDARG00000008212 136 0.915 - - - - - - - 0.915 - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
93. CCSER2 CCSER2 272 0.915 - - - - - - - 0.915 -
94. CACNA1H CACNA1H 34 0.915 - - - - - - - 0.915 -
95. BEGAIN BEGAIN 39 0.912 - - - - - - - 0.912 -
96. hpx ENSDARG00000012609 93 0.912 - - - - - - - 0.912 - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
97. yipf1 ENSDARG00000014474 542 0.911 - - - - - - - 0.911 - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
98. si:dkey-175g6.2 ENSDARG00000086665 39 0.911 - - - - - - - 0.911 - si:dkey-175g6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8061]
99. si:ch211-215p11.4 si:ch211-215p11.4 67 0.911 - - - - - - - 0.911 -
100. poc1b ENSDARG00000021110, ENSDARG00000116944 254 0.91 - - - - - - - 0.910 - POC1 centriolar protein B [Source:ZFIN;Acc:ZDB-GENE-031118-54]

There are 964 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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