Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ddit3

Gene Name Gene ID Reads Annotation
ddit3 ENSDARG00000059836 334 DNA-damage-inducible transcript 3 [Source:ZFIN;Acc:ZDB-GENE-070410-90]










Genes with expression patterns similar to ddit3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddit3 ENSDARG00000059836 334 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA-damage-inducible transcript 3 [Source:ZFIN;Acc:ZDB-GENE-070410-90]
2. camk2b1 ENSDARG00000011065 79 1.803 - - - - - 0.923 0.880 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
3. adcy8 ENSDARG00000031783 29 1.715 - - - - - 0.924 0.791 - - adenylate cyclase 8 (brain) [Source:ZFIN;Acc:ZDB-GENE-070912-197]
4. crfb12 ENSDARG00000052413 47 1.687 - - - - 0.833 0.854 - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
5. si:dkey-71b5.9 si:dkey-71b5.9 398 1.677 - - - - - 0.846 - 0.831 -
6. sptssb ENSDARG00000091658 42 1.663 - - - - - 0.783 0.880 - - serine palmitoyltransferase, small subunit B [Source:ZFIN;Acc:ZDB-GENE-060421-6887]
7. pde11al ENSDARG00000006151 70 1.657 - - - - - 0.935 0.722 - - phosphodiesterase 11a, like [Source:ZFIN;Acc:ZDB-GENE-031118-106]
8. zgc:172106 ENSDARG00000017984 90 1.652 0.784 - - - - 0.868 - - - zgc:172106 [Source:ZFIN;Acc:ZDB-GENE-080204-42]
9. chico ENSDARG00000019588 77 1.634 - - 0.744 - - 0.890 - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
10. appbp2 ENSDARG00000007566 1961 1.624 - 0.798 - - - 0.826 - - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
11. tnfsf13b ENSDARG00000012945 54 1.61 - - - - - 0.802 0.808 - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
12. SNORD38 SNORD38 171 1.606 0.749 - - - - 0.857 - - -
13. fopnl ENSDARG00000071198 1002 1.601 - - - - - 0.841 0.760 - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
14. fnbp1l ENSDARG00000020131 79 1.576 - - 0.751 - - 0.825 - - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
15. alpi.1 ENSDARG00000015273 1712 1.573 0.766 0.807 - - - - - - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
16. si:ch211-135f11.1 166 1.564 - - 0.794 - - 0.770 - - - si:ch211-135f11.1, transcript variant X3
17. pdcd6ip ENSDARG00000025269 2522 1.555 - 0.843 0.712 - - - - - - programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
18. zgc:171727 ENSDARG00000105781 350 1.552 0.701 - - - - 0.851 - - - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
19. ltc4s ENSDARG00000062598 138 1.548 0.775 - - - - 0.773 - - - leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
20. C12H16orf52 C12H16orf52 193 1.547 0.790 - - - - - 0.757 - -
21. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 1.544 - - - - - - 0.773 0.771 - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
22. ches1 ENSDARG00000043553 96 1.542 0.706 - - - - 0.836 - - - checkpoint suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-040217-1]
23. dnm2a ENSDARG00000069937 32 1.541 - - - - 0.808 - 0.733 - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
24. si:ch211-263m18.4 ENSDARG00000093353 27 1.54 - - 0.759 - - 0.781 - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
25. zgc:110353 ENSDARG00000039443 80 1.534 - - 0.774 - - 0.760 - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
26. svopl ENSDARG00000057983, ENSDARG00000116460 975 1.533 0.810 - - - - 0.723 - - - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
27. mafk ENSDARG00000100947 1460 1.513 - 0.758 - - - - 0.755 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
28. il2rb ENSDARG00000075720 116 1.511 - - - - - 0.800 0.711 - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
29. zgc:174688 zgc:174688 170 1.496 - - 0.786 - - - 0.710 - -
30. METRNL 166 1.495 0.716 - 0.779 - - - - - - meteorin, glial cell differentiation regulator-like
31. gata3 ENSDARG00000016526 1857 1.494 0.769 0.725 - - - - - - - GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
32. znf511 ENSDARG00000000760 446 1.465 - - - - - 0.736 - 0.729 - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
33. HPS6 265 1.454 - - 0.724 - - - 0.730 - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
34. rab9b ENSDARG00000103391 813 1.453 - - - - - 0.717 - 0.736 - RAB9B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-091118-112]
35. cd40 ENSDARG00000054968 90 1.453 - - 0.742 - - - - 0.711 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
36. FP236513.2 FP236513.2 443 0.978 - - - - - 0.978 - - -
37. trpm4 trpm4 501 0.961 - - - - - 0.961 - - -
38. ush1c ENSDARG00000051876, ENSDARG00000112799 25 0.935 - - - - - 0.935 - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
39. nkiras2_1 ENSDARG00000052594 31 0.935 - - - - - 0.935 - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
40. pip5k1cb ENSDARG00000100313 3 0.935 - - - - - 0.935 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
41. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 0.935 - - - - - 0.935 - - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
42. 5S_rRNA_23 5S_rRNA_23 2 0.935 - - - - - 0.935 - - -
43. CR677591.1 CR677591.1 19 0.935 - - - - - 0.935 - - -
44. slc27a6 ENSDARG00000046053 57 0.935 - - - - - 0.935 - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
45. sowahaa ENSDARG00000077861 3 0.935 - - - - - 0.935 - - - sosondowah ankyrin repeat domain family member Aa [Source:ZFIN;Acc:ZDB-GENE-100910-3]
46. ssr1 ENSDARG00000101627 151 0.935 - - - - - 0.935 - - - signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]
47. CABZ01092722.1 CABZ01092722.1 2 0.935 - - - - - 0.935 - - -
48. mxd ENSDARG00000023369 8 0.935 - - - - - 0.935 - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
49. SLC2A4RG SLC2A4RG 47 0.935 - - - - - 0.935 - - -
50. BX005085.3 ENSDARG00000103450 45 0.935 - - - - - 0.935 - - -
51. exoc4 ENSDARG00000004336 32 0.935 - - - - - 0.935 - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
52. pde6c ENSDARG00000100397 49 0.935 - - - - - 0.935 - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
53. prdm2a ENSDARG00000090721 11 0.935 - - - - - 0.935 - - - PR domain containing 2, with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-081104-139]
54. si:ch211-215m21.11 si:ch211-215m21.11 2 0.935 - - - - - 0.935 - - -
55. BX649415.1 BX649415.1 5 0.935 - - - - - 0.935 - - -
56. C11H1orf116 C11H1orf116 9 0.935 - - - - - 0.935 - - -
57. si:dkey-279j5.1 ENSDARG00000101459 17 0.935 - - - - - 0.935 - - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
58. si:rp71-1h20.5 ENSDARG00000098176 3 0.935 - - - - - 0.935 - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
59. si:dkey-197d18.3 si:dkey-197d18.3 7 0.935 - - - - - 0.935 - - -
60. BX571881.1 BX571881.1 2 0.935 - - - - - 0.935 - - -
61. SLC22A7 SLC22A7 3 0.935 - - - - - 0.935 - - -
62. SLC1A7 SLC1A7 3 0.935 - - - - - 0.935 - - -
63. zgc:174696 ENSDARG00000110658 67 0.935 - - - - - 0.935 - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
64. rpn2 ENSDARG00000009724 322 0.935 - - - - - 0.935 - - - ribophorin II [Source:ZFIN;Acc:ZDB-GENE-030131-7928]
65. CR790363.1 ENSDARG00000097364 145 0.935 - - - - - 0.935 - - -
66. si:dkey-94e7.2 ENSDARG00000068474 14 0.935 - - - - - 0.935 - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
67. SDSL ENSDARG00000074698 34 0.935 - - - - - 0.935 - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
68. CABZ01085657.1 CABZ01085657.1 23 0.935 - - - - - 0.935 - - -
69. sybu ENSDARG00000060112 22 0.935 - - - - - 0.935 - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
70. si:dkey-9i23.6 ENSDARG00000094678 58 0.935 - - - - - 0.935 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
71. tmem196b ENSDARG00000090140 20 0.935 - - - - - 0.935 - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
72. PLEKHG3 72 0.935 - - - - - 0.935 - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
73. CT583679.1 CT583679.1 11 0.935 - - - - - 0.935 - - -
74. itln3 ENSDARG00000003523 3 0.935 - - - - - 0.935 - - - intelectin 3 [Source:ZFIN;Acc:ZDB-GENE-090527-4]
75. abhd6b ENSDARG00000070894, ENSDARG00000111140 5 0.935 - - - - - 0.935 - - - abhydrolase domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-070410-104]
76. scospondin ENSDARG00000067859 4 0.935 - - - - - 0.935 - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
77. iffo1a ENSDARG00000062976 5 0.935 - - - - - 0.935 - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
78. neurod6b ENSDARG00000020794 164 0.935 - - - - - 0.935 - - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
79. BX004785.2 ENSDARG00000093487 10 0.935 - - - - - 0.935 - - -
80. trpc2 trpc2 10 0.935 - - - - - 0.935 - - -
81. CABZ01118004.1 ENSDARG00000117218 2 0.935 - - - - - 0.935 - - -
82. si:ch211-212k5.2 si:ch211-212k5.2 152 0.935 - - - - - 0.935 - - -
83. 5_8S_rRNA 5_8S_rRNA 24 0.935 - - - - - 0.935 - - -
84. bend5 ENSDARG00000075624 10 0.935 - - - - - 0.935 - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
85. gabrr2b ENSDARG00000014057 9 0.935 - - - - - 0.935 - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
86. ptprua ENSDARG00000092638 479 0.935 - - - - - 0.935 - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
87. PLEKHS1_2 PLEKHS1_2 21 0.935 - - - - - 0.935 - - -
88. si:dkey-229d11.3 ENSDARG00000093255 41 0.935 - - - - - 0.935 - - - si:dkey-229d11.3 [Source:ZFIN;Acc:ZDB-GENE-091117-40]
89. WAPAL_1 WAPAL_1 205 0.934 - - - - - 0.934 - - -
90. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.934 - - - - - 0.934 - - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
91. NMUR1 NMUR1 30 0.931 - - - - - 0.931 - - -
92. tmem129 ENSDARG00000075346 109 0.93 - - - - - - 0.930 - - transmembrane protein 129, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2796]
93. AP1M1 ENSDARG00000096249 4 0.928 - - - - - 0.928 - - - adaptor related protein complex 1 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-110126-1]
94. CU638740.3 CU638740.3 164 0.928 - - - - - 0.928 - - -
95. zgc:173702_1 ENSDARG00000110229 24 0.928 - - - - - 0.928 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
96. PPP1R15B ENSDARG00000068128, ENSDARG00000114787 112 0.928 - - - - - 0.928 - - - protein phosphatase 1, regulatory subunit 15B [Source:ZFIN;Acc:ZDB-GENE-030829-40]
97. vwa2 ENSDARG00000075441 44 0.928 - - - - - 0.928 - - - von Willebrand factor A domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100302-1]
98. fpgt ENSDARG00000042139 155 0.927 - - - - - 0.927 - - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
99. tnxb 30 0.924 - - - - - 0.924 - - - tenascin XB
100. CABZ01065246.2 CABZ01065246.2 45 0.924 - - - - - 0.924 - - -

There are 1055 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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