Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ddb2

Gene Name Gene ID Reads Annotation
ddb2 ENSDARG00000041140, ENSDARG00000114723 827 damage-specific DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-169]










Genes with expression patterns similar to ddb2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddb2 ENSDARG00000041140, ENSDARG00000114723 827 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 damage-specific DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-169]
2. ENSDARG00000086878 ENSDARG00000086878 332 1.756 - - - 0.877 - 0.879 - - -
3. tbrg4 ENSDARG00000074807 674 1.753 - 0.877 - 0.876 - - - - - transforming growth factor beta regulator 4 [Source:ZFIN;Acc:ZDB-GENE-091020-8]
4. ripk2 ENSDARG00000104290 71 1.674 0.824 - - - - 0.850 - - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
5. anapc13 ENSDARG00000078435 996 1.669 - - - 0.788 - 0.881 - - - anaphase promoting complex subunit 13 [Source:ZFIN;Acc:ZDB-GENE-091204-298]
6. gak ENSDARG00000090654 695 1.652 - - 0.775 - - 0.877 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
7. zgc:174697 zgc:174697 128 1.646 - - - - - 0.862 0.784 - -
8. si:dkey-117n7.5 ENSDARG00000089640 452 1.636 - 0.812 - - - - 0.824 - - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
9. atoh1b ENSDARG00000099564 494 1.628 - - 0.767 - - 0.861 - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
10. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.626 - 0.712 0.914 - - - - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
11. CT955963.1 ENSDARG00000100370 23 1.619 - - - - - 0.900 0.719 - -
12. gnav1 ENSDARG00000043006 305 1.59 - 0.758 - - - 0.832 - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
13. usb1 ENSDARG00000003841 524 1.578 - 0.705 - - - 0.873 - - - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
14. sirt1 ENSDARG00000068064 1393 1.576 - - - 0.807 - 0.769 - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
15. vps72 1164 1.565 - - - 0.750 - 0.815 - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
16. fam131a ENSDARG00000077022 445 1.564 - 0.799 - - - 0.765 - - - family with sequence similarity 131, member A [Source:ZFIN;Acc:ZDB-GENE-080204-112]
17. C1H10orf12 C1H10orf12 1663 1.559 - 0.753 - - - 0.806 - - -
18. NUDT8 ENSDARG00000007722 329 1.558 - - 0.780 - - 0.778 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
19. fem1b ENSDARG00000062636 474 1.558 - - - 0.754 - 0.804 - - - fem-1 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-071009-3]
20. ctrl ENSDARG00000068680 18 1.557 - - - - - 0.844 0.713 - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
21. nin ENSDARG00000060298 1558 1.556 - - 0.768 - - 0.788 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
22. TCAIM ENSDARG00000079881 424 1.555 - - 0.782 - - 0.773 - - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
23. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 1.545 - 0.746 - - - 0.799 - - - zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
24. WDFY3 ENSDARG00000078890 2092 1.543 - - 0.742 - - 0.801 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
25. ghrb ENSDARG00000007671 1082 1.542 - 0.770 0.772 - - - - - - growth hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-071119-4]
26. CR387996.2 CR387996.2 1272 1.534 - 0.766 0.768 - - - - - -
27. asnsd1 830 1.533 - 0.778 - - - 0.755 - - - asparagine synthetase domain containing 1, transcript variant X1
28. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.525 - - 0.775 - - 0.750 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
29. tubgcp2 ENSDARG00000013079 1520 1.517 - - 0.767 - - 0.750 - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
30. spg7 ENSDARG00000068187 451 1.51 - 0.760 - - - - 0.750 - - spastic paraplegia 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5391]
31. ARHGAP23 ARHGAP23 3946 1.505 - - 0.772 - - 0.733 - - -
32. ercc2 ENSDARG00000021985 678 1.49 - - 0.782 - - 0.708 - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
33. tnikb ENSDARG00000009031 1836 1.47 - 0.704 0.766 - - - - - - TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
34. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.467 - - 0.701 - - 0.766 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
35. CT583658.1 CT583658.1 561 1.466 - - - - - 0.733 0.733 - -
36. ap2m1b ENSDARG00000033899 317 1.464 - 0.743 - - - 0.721 - - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
37. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 1.462 - 0.701 0.761 - - - - - - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
38. SNX19 SNX19 350 1.461 - 0.716 - - - 0.745 - - -
39. phgdh ENSDARG00000001873 8325 1.452 - 0.728 - - - 0.724 - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
40. MXD4 ENSDARG00000054031 1165 1.444 - 0.732 - 0.712 - - - - - MAX dimerization protein 4 [Source:ZFIN;Acc:ZDB-GENE-050208-44]
41. arl14 ENSDARG00000063223 211 1.412 - - - - - 0.706 0.706 - - ADP-ribosylation factor-like 14 [Source:ZFIN;Acc:ZDB-GENE-070705-288]
42. NRD1 NRD1 3486 0.987 - - 0.987 - - - - - -
43. si:dkey-10f21.16 si:dkey-10f21.16 252 0.985 - - - - - 0.985 - - -
44. KIF21A_1 KIF21A_1 237 0.973 - - - - - 0.973 - - -
45. FIBCD1 ENSDARG00000074640 56 0.957 - - - - - 0.957 - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
46. si:dkey-256h2.1 ENSDARG00000021849 38 0.955 - - - - - 0.955 - - - si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
47. ODF3L2 40 0.952 - - - - - 0.952 - - - outer dense fiber of sperm tails 3-like 2
48. FOXK2 ENSDARG00000030583 5500 0.95 - - 0.950 - - - - - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
49. mcm9 ENSDARG00000013528 212 0.948 - - - - - 0.948 - - - minichromosome maintenance 9 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-041014-310]
50. wdr11 ENSDARG00000075245 743 0.948 - - 0.948 - - - - - - WD repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-081107-28]
51. si:ch211-163b2.4 ENSDARG00000094890 140 0.947 - - - - - 0.947 - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
52. dnm3 dnm3 45 0.943 - - - - - 0.943 - - -
53. b3galt2 ENSDARG00000102061, ENSDARG00000114032 216 0.943 - - - - - 0.943 - - - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2078]
54. pak4 ENSDARG00000018110 1962 0.942 - - 0.942 - - - - - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
55. chd1l ENSDARG00000015471 1142 0.939 - - 0.939 - - - - - - chromodomain helicase DNA binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-892]
56. gusb ENSDARG00000063126 867 0.939 - - 0.939 - - - - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
57. COLGALT1 ENSDARG00000073974 5069 0.938 - - 0.938 - - - - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
58. gtf2a1 ENSDARG00000011000 2026 0.937 - - 0.937 - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
59. BX649494.1 BX649494.1 195 0.937 - - - - - 0.937 - - -
60. zgc:162160 ENSDARG00000060259 117 0.937 - - - - - 0.937 - - - zgc:162160 [Source:ZFIN;Acc:ZDB-GENE-070424-22]
61. enc1 ENSDARG00000035398 1657 0.937 - - 0.937 - - - - - - ectodermal-neural cortex 1 [Source:ZFIN;Acc:ZDB-GENE-060531-140]
62. fkbp3 ENSDARG00000098059 5428 0.937 - - 0.937 - - - - - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
63. mipep ENSDARG00000055344 63 0.936 - - - - - 0.936 - - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
64. si:ch211-215p11.4 si:ch211-215p11.4 67 0.935 - - - - - 0.935 - - -
65. prpf38b ENSDARG00000053101 1785 0.932 - - 0.932 - - - - - - pre-mRNA processing factor 38B [Source:ZFIN;Acc:ZDB-GENE-040426-2878]
66. RAC1_2 RAC1_2 51 0.932 - - - - - 0.932 - - -
67. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 0.932 - - - - - 0.932 - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
68. SLC36A4 ENSDARG00000039661 175 0.931 - - - - - 0.931 - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
69. noc3l ENSDARG00000002487 230 0.931 - - - - - 0.931 - - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
70. si:dkey-163m14.10 si:dkey-163m14.10 33 0.93 - - - - - 0.930 - - -
71. itfg2 ENSDARG00000002174 114 0.929 - - - - - 0.929 - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
72. dnal1 ENSDARG00000034042 339 0.928 - - - - - 0.928 - - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
73. CR855306.1 ENSDARG00000099475 102 0.928 - - - - - 0.928 - - -
74. dbpa ENSDARG00000063014 107 0.928 - - - - - 0.928 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
75. zgc:66484 ENSDARG00000030478 167 0.927 - - - - - 0.927 - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
76. FAM126B 588 0.925 - - - - - 0.925 - - - family with sequence similarity 126 member B
77. fam49ba ENSDARG00000020929 1980 0.924 - - 0.924 - - - - - - family with sequence similarity 49, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9537]
78. si:dkey-14o1.14 si:dkey-14o1.14 142 0.924 - - - - - 0.924 - - -
79. CU463790.1 CU463790.1 60 0.923 - - - - - 0.923 - - -
80. ubp1 ENSDARG00000018000 1047 0.923 - - - - - 0.923 - - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
81. si:dkey-51d8.11 8 0.921 - - - - - 0.921 - - - si:dkey-51d8.11, transcript variant X6
82. BX004890.2 BX004890.2 84 0.921 - - - - - 0.921 - - -
83. si:rp71-68n21.11 si:rp71-68n21.11 146 0.92 - - - - - 0.920 - - -
84. pycr1 pycr1 1258 0.92 - - - - - 0.920 - - -
85. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 0.919 - - - - - 0.919 - - - stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
86. ARMCX3 ARMCX3 328 0.919 - - - 0.919 - - - - -
87. AVL9 ENSDARG00000055538 329 0.918 - - - - - 0.918 - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
88. KCTD14 ENSDARG00000110240 122 0.918 - - - - - 0.918 - - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
89. fstl3 ENSDARG00000025670 41 0.917 - - - - - 0.917 - - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
90. MAN2A2 ENSDARG00000063101 922 0.913 - - - - - 0.913 - - - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
91. rnd1 rnd1 1086 0.912 - - - - - 0.912 - - -
92. PARM1 ENSDARG00000114063 58 0.911 - - - - - 0.911 - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
93. lrrfip1b ENSDARG00000095170 293 0.911 - - - - - 0.911 - - - leucine rich repeat (in FLII) interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-050208-324]
94. C8H1orf194 C8H1orf194 111 0.91 - - - - - 0.910 - - -
95. MON2 ENSDARG00000099798 2359 0.91 - - - - - 0.910 - - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
96. SEC24A ENSDARG00000104375 2614 0.91 - - 0.910 - - - - - - SEC24 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-120926-1]
97. gpr155b ENSDARG00000071086 54 0.909 - - - - - 0.909 - - - G protein-coupled receptor 155b [Source:ZFIN;Acc:ZDB-GENE-110815-2]
98. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 0.909 - - - - - 0.909 - - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
99. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 0.908 - - 0.908 - - - - - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
100. dnaja1l dnaja1l 1536 0.908 - - - - - 0.908 - - -

There are 1298 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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