Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ddb1

Gene Name Gene ID Reads Annotation
ddb1 ENSDARG00000074431 1054 damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]










Genes with expression patterns similar to ddb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddb1 ENSDARG00000074431 1054 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
2. armc1l ENSDARG00000020887 1219 1.836 - - - 0.851 - - 0.985 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
3. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.826 - - - 0.841 - - 0.985 - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
4. RBBP8NL RBBP8NL 813 1.817 - - - 0.836 - - 0.981 - -
5. nrg2a ENSDARG00000077818 854 1.789 - - - - - - 0.986 0.803 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
6. mob2b ENSDARG00000012005 395 1.777 - - - - - 0.795 0.982 - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
7. ciao1 ENSDARG00000059212 1222 1.774 - 0.797 - - - - 0.977 - - cytosolic iron-sulfur assembly component 1 [Source:ZFIN;Acc:ZDB-GENE-040426-839]
8. srrm2 ENSDARG00000037965 1967 1.767 - - - 0.791 - - 0.976 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
9. btf3l4_1 ENSDARG00000089681 1089 1.755 - 0.776 - - - - 0.979 - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
10. rpz2 ENSDARG00000091215 765 1.739 0.760 - - - - - 0.979 - - rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
11. timm23 timm23 2712 1.737 - - - 0.759 - - 0.978 - -
12. CAPN5 CAPN5 357 1.732 - - - - - - 0.985 0.747 -
13. pcid2 ENSDARG00000013802 1596 1.727 - - - - - - 0.982 0.745 - PCI domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-79]
14. ncapg2 ENSDARG00000060023 993 1.717 - - - 0.736 - - 0.981 - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
15. rac3b ENSDARG00000020795 1523 1.71 - - - 0.722 - - 0.988 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
16. klc2 3058 1.709 - - - 0.733 - - 0.976 - - kinesin light chain 2
17. sgcg_1 ENSDARG00000038107 1998 1.705 - - - - - 0.757 0.948 - - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
18. ik ENSDARG00000004161 3132 1.7 - - - 0.720 - - 0.980 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
19. cbx2 ENSDARG00000044938 1576 1.697 - 0.733 - - - - 0.964 - - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
20. cdkn2aipnl ENSDARG00000053395 5107 1.697 - 0.755 - - - - 0.942 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
21. TAF2 ENSDARG00000102307 1401 1.694 - - - 0.725 - - 0.969 - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
22. Mar-07 Mar-07 2926 1.694 - 0.717 - - - - 0.977 - -
23. CACHD1 ENSDARG00000061590 1287 1.693 - - - 0.713 - - 0.980 - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
24. mrpl12 ENSDARG00000038768 5539 1.691 - 0.746 - - - - 0.945 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
25. FBXO31 ENSDARG00000062195 753 1.689 0.704 - - - - - 0.985 - - F-box protein 31 [Source:ZFIN;Acc:ZDB-GENE-070628-4]
26. pes ENSDARG00000018902 3286 1.689 - 0.709 - - - - 0.980 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
27. fbxo30a ENSDARG00000058561 867 1.687 - 0.712 - - - - 0.975 - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
28. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.679 - - - - - - 0.969 - 0.710 SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
29. wdr82 ENSDARG00000014083 3159 1.672 - 0.708 - - - - 0.964 - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
30. fam213aa 1986 1.661 - 0.753 - - - - 0.908 - - family with sequence similarity 213, member Aa
31. cadm1a ENSDARG00000031075 2484 1.66 - - - 0.726 - - 0.934 - - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
32. rpf2 ENSDARG00000043960 2719 1.651 - 0.752 - - - - - 0.899 - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
33. purba ENSDARG00000068822 2537 1.646 - - - 0.710 - - 0.936 - - purine-rich element binding protein Ba [Source:ZFIN;Acc:ZDB-GENE-060531-100]
34. ANK1_1 ANK1_1 507 1.643 - - - 0.748 - - - 0.895 -
35. ndufa6 ENSDARG00000038028 2653 1.636 - 0.716 - - - - 0.920 - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
36. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.62 - - - - - - 0.917 0.703 - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
37. cnih cnih 8292 1.617 - - - - - 0.789 0.828 - -
38. EML4_1 EML4_1 8736 1.614 - 0.796 - - - - 0.818 - -
39. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.613 - 0.758 - 0.855 - - - - - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
40. zgc:110655 zgc:110655 4237 1.609 - - - - - 0.762 0.847 - -
41. dnajc18 ENSDARG00000056005 8084 1.606 - - - 0.756 - - - 0.850 - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
42. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.588 - - - 0.792 - - - 0.796 - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
43. si:ch73-387e10.3 si:ch73-387e10.3 517 1.579 - - - 0.788 - - - 0.791 -
44. WDR89 ENSDARG00000077265 322 1.567 - 0.771 - 0.796 - - - - - WD repeat domain 89 [Source:ZFIN;Acc:ZDB-GENE-090319-3]
45. endog ENSDARG00000058865 679 1.564 - - - - - 0.827 - 0.737 - endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
46. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.562 - 0.757 - - - - - 0.805 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
47. camk2d1 ENSDARG00000043010 669 1.555 - - - 0.751 - - - 0.804 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
48. BX539313.3 ENSDARG00000098016 638 1.545 - 0.773 - 0.772 - - - - -
49. rprd2b ENSDARG00000074676 809 1.541 - - - 0.800 - - - 0.741 - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
50. CAMK2G CAMK2G 3537 1.541 - 0.829 - - - 0.712 - - -
51. ccnh ENSDARG00000007657 745 1.54 - - - 0.777 - 0.763 - - - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
52. otud5a ENSDARG00000059006 2073 1.536 - - - 0.814 - - - 0.722 - OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
53. ITCH ITCH 1226 1.526 - 0.761 - 0.765 - - - - -
54. exd2 ENSDARG00000016117 342 1.524 - 0.742 - 0.782 - - - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
55. cxxc1 cxxc1 914 1.511 0.739 - - 0.772 - - - - -
56. ndufaf4 ENSDARG00000077859 552 1.506 - - - 0.749 - - - 0.757 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
57. znf865 ENSDARG00000036698 15532 1.506 - 0.795 - - - 0.711 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
58. tuba8l3 ENSDARG00000070155 7525 1.505 - - - - - 0.720 0.785 - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
59. chd4b ENSDARG00000025789 14299 1.503 - 0.735 - - - - 0.768 - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
60. RBM26 ENSDARG00000104130 1012 1.503 - - - 0.759 - - - 0.744 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
61. egr2a ENSDARG00000044098 1101 1.501 0.702 - - 0.799 - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
62. ryk ENSDARG00000007231 1611 1.501 - 0.782 - - - 0.719 - - - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
63. kmt2bb ENSDARG00000060697 5230 1.495 - - - 0.782 - 0.713 - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
64. CABZ01003826.1 CABZ01003826.1 486 1.491 - 0.707 - - - - - 0.784 -
65. chrna1 ENSDARG00000009021 2931 1.481 - 0.776 - - - 0.705 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
66. syne1a ENSDARG00000009499, ENSDARG00000116204 601 1.481 - - - - - 0.725 - 0.756 - spectrin repeat containing, nuclear envelope 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4172]
67. C8H5orf51 C8H5orf51 1199 1.475 - 0.755 - - - 0.720 - - -
68. lin7a ENSDARG00000013414 1589 1.471 - 0.754 - - - 0.717 - - - lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
69. fam172a ENSDARG00000052697 422 1.47 - - - 0.725 - - - 0.745 - family with sequence similarity 172, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1396]
70. prkcbp1l ENSDARG00000011932 2714 1.455 - 0.724 - 0.731 - - - - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
71. grsf1 ENSDARG00000053021 2752 1.438 - 0.717 - - - 0.721 - - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
72. mrps9 ENSDARG00000061505 1636 1.437 - 0.729 - - - 0.708 - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
73. ITGB1BP2 ENSDARG00000030176 2472 1.42 - 0.706 - - - 0.714 - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
74. alg3 ENSDARG00000053155 1843 1.418 - 0.715 - - - 0.703 - - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
75. rnf44 ENSDARG00000068582 1612 1.415 - 0.702 - - - - - 0.713 - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
76. pnkd ENSDARG00000071032 447 1.41 - - - 0.705 - - - 0.705 - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
77. hfe2 4113 1.408 - 0.704 - - - 0.704 - - - hemochromatosis type 2
78. COL13A1 1565 0.992 - - - - - - 0.992 - - collagen, type XIII, alpha 1, transcript variant X1
79. srm ENSDARG00000055760 6572 0.992 - - - - - - 0.992 - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
80. supt4h1 ENSDARG00000113969 1024 0.989 - - - - - - 0.989 - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
81. ccdc102a ENSDARG00000003872 791 0.989 - - - - - - 0.989 - - coiled-coil domain containing 102A [Source:ZFIN;Acc:ZDB-GENE-030131-4044]
82. pex14 ENSDARG00000028322 1087 0.988 - - - - - - 0.988 - - peroxisomal biogenesis factor 14 [Source:ZFIN;Acc:ZDB-GENE-060130-169]
83. uba5 ENSDARG00000063588 1260 0.988 - - - - - - 0.988 - - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
84. zdhhc3 zdhhc3 152 0.988 - - - - - - 0.988 - -
85. CU638740.1 CU638740.1 398 0.988 - - - - - - 0.988 - -
86. slc35b3 ENSDARG00000045437 370 0.987 - - - - - - 0.987 - - solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 [Source:ZFIN;Acc:ZDB-GENE-060312-46]
87. gbas gbas 735 0.987 - - - - - - 0.987 - -
88. ZNF337_10 ZNF337_10 183 0.987 - - - - - - 0.987 - -
89. nup107 ENSDARG00000016010 1043 0.987 - - - - - - 0.987 - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
90. cul1b ENSDARG00000007691 719 0.987 - - - - - - 0.987 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
91. PDZD8 ENSDARG00000088699 844 0.987 - - - - - - 0.987 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
92. ERRFI1 ERRFI1 664 0.987 - - - - - - 0.987 - -
93. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 0.986 - - - - - - 0.986 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
94. prdm5 ENSDARG00000006288 472 0.986 - - - - - - 0.986 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
95. yy1b ENSDARG00000027978 2669 0.986 - - - - - - 0.986 - - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
96. dhodh ENSDARG00000051889 401 0.986 - - - - - - 0.986 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
97. PRR5 PRR5 630 0.986 - - - - - - 0.986 - -
98. CABZ01068263.1 CABZ01068263.1 712 0.986 - - - - - - 0.986 - -
99. timm10b ENSDARG00000043898 1233 0.986 - - - - - - 0.986 - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
100. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.985 - - - - - - 0.985 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]

There are 1537 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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