Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for dclre1b

Gene Name Gene ID Reads Annotation
dclre1b ENSDARG00000068833 359 DNA cross-link repair 1B [Source:ZFIN;Acc:ZDB-GENE-061013-328]










Genes with expression patterns similar to dclre1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dclre1b ENSDARG00000068833 359 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA cross-link repair 1B [Source:ZFIN;Acc:ZDB-GENE-061013-328]
2. DIDO1 ENSDARG00000057940 312 1.656 - 0.890 - - - 0.766 - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
3. RFWD3 ENSDARG00000087752 167 1.613 0.895 0.718 - - - - - - - ring finger and WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-120529-1]
4. wu:fe05a04 ENSDARG00000087530 843 1.607 0.724 0.883 - - - - - - - wu:fe05a04 [Source:ZFIN;Acc:ZDB-GENE-030131-4873]
5. SLC5A6 SLC5A6 179 1.544 0.768 - - - - 0.776 - - -
6. slc17a9a ENSDARG00000042954 36 1.543 0.763 - - - - - 0.780 - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
7. acta2 ENSDARG00000045180 96 1.506 0.753 - - - - 0.753 - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
8. wu:fd55e03 wu:fd55e03 41 1.497 - - - - - 0.754 0.743 - -
9. syt16 ENSDARG00000030761 322 1.493 - - - - - 0.747 0.746 - - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
10. PLEKHG3 72 1.493 0.769 - - - - 0.724 - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
11. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.49 - 0.766 - - - - 0.724 - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
12. FHOD1 ENSDARG00000051768 43 1.478 - 0.773 - - - 0.705 - - - formin homology 2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110623-4]
13. tubg1 ENSDARG00000015610 2433 1.468 0.743 - - - - - 0.725 - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
14. crfb12 ENSDARG00000052413 47 1.456 0.753 - - - - 0.703 - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
15. si:ch211-212k5.2 si:ch211-212k5.2 152 1.449 - - - - - 0.724 0.725 - -
16. bloc1s4 ENSDARG00000007597 365 1.435 - 0.733 - - - - 0.702 - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [Source:ZFIN;Acc:ZDB-GENE-040801-215]
17. SDSL ENSDARG00000074698 34 1.433 0.709 - - - - 0.724 - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
18. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 1.43 - 0.719 - - - - 0.711 - - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
19. rabl2 ENSDARG00000063321, ENSDARG00000109811, ENSDARG00000112447 301 1.425 0.717 - - - - - 0.708 - - RAB, member of RAS oncogene family-like 2 [Source:ZFIN;Acc:ZDB-GENE-060503-464]
20. socs2 ENSDARG00000045557 340 1.423 0.708 0.715 - - - - - - - suppressor of cytokine signaling 2 [Source:ZFIN;Acc:ZDB-GENE-041210-171]
21. FAM53C FAM53C 769 1.403 - 0.702 - - - - - 0.701 -
22. porcnl_1 ENSDARG00000052455 683 0.921 - 0.921 - - - - - - - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
23. stard3nl ENSDARG00000045421 316 0.905 - 0.905 - - - - - - - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
24. DYRK3 ENSDARG00000070600, ENSDARG00000115625 127 0.898 - 0.898 - - - - - - - dual specificity tyrosine phosphorylation regulated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-080219-31]
25. fam131bb ENSDARG00000070575 1054 0.898 0.898 - - - - - - - - family with sequence similarity 131, member Bb [Source:ZFIN;Acc:ZDB-GENE-100922-12]
26. rab11fip1a ENSDARG00000046124 69 0.893 - 0.893 - - - - - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
27. si:ch1073-143l10.2 ENSDARG00000094899 32 0.892 0.892 - - - - - - - - si:ch1073-143l10.2 [Source:ZFIN;Acc:ZDB-GENE-030131-863]
28. AL928712.1 AL928712.1 101 0.889 - 0.889 - - - - - - -
29. CABZ01065246.2 CABZ01065246.2 45 0.886 0.886 - - - - - - - -
30. arhgap25 ENSDARG00000061784 112 0.882 - 0.882 - - - - - - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
31. THEM4 ENSDARG00000061621 364 0.878 - 0.878 - - - - - - - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
32. SACS_1 SACS_1 234 0.874 0.874 - - - - - - - -
33. nostrin ENSDARG00000077866 85 0.874 - 0.874 - - - - - - - nitric oxide synthase trafficking [Source:ZFIN;Acc:ZDB-GENE-070522-2]
34. naif1 ENSDARG00000062753 176 0.873 - 0.873 - - - - - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
35. acer1 ENSDARG00000010347 101 0.868 0.868 - - - - - - - - alkaline ceramidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-70]
36. eno1b ENSDARG00000013750 63 0.868 - 0.868 - - - - - - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
37. tbc1d22a ENSDARG00000045510 363 0.867 - 0.867 - - - - - - - TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
38. cnp ENSDARG00000070822 649 0.867 - 0.867 - - - - - - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
39. otud4 ENSDARG00000077810 120 0.865 - 0.865 - - - - - - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
40. ptk6a ENSDARG00000017947 682 0.864 0.864 - - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
41. CR388231.1 ENSDARG00000098710 153 0.864 - 0.864 - - - - - - -
42. vdrb ENSDARG00000070721, ENSDARG00000114864 559 0.861 - - - - - - 0.861 - - vitamin D receptor b [Source:ZFIN;Acc:ZDB-GENE-080403-10]
43. C20H6orf58_1 C20H6orf58_1 216 0.861 - - - - - 0.861 - - -
44. acyp1 ENSDARG00000060126 2161 0.858 0.858 - - - - - - - - acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
45. SPAG9 ENSDARG00000078142 629 0.855 - - - - - 0.855 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
46. trpc4apb ENSDARG00000020647 670 0.855 0.855 - - - - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
47. PDGFB_1 PDGFB_1 139 0.855 - 0.855 - - - - - - -
48. cnep1r1 ENSDARG00000036064 1440 0.852 - 0.852 - - - - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
49. CABZ01073795.1 ENSDARG00000010729 52 0.852 - 0.852 - - - - - - - interferon-induced protein 44 [Source:NCBI gene;Acc:795887]
50. znf516 ENSDARG00000070809 65 0.852 - 0.852 - - - - - - - zinc finger protein 516 [Source:ZFIN;Acc:ZDB-GENE-060503-194]
51. CU638738.1 CU638738.1 131 0.852 - 0.852 - - - - - - -
52. mrpl20 ENSDARG00000090462 791 0.851 - - - - - - 0.851 - - mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
53. znf106b ENSDARG00000091947 108 0.85 - 0.850 - - - - - - - zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
54. mctp2a ENSDARG00000001414 307 0.85 - 0.850 - - - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
55. nmd3 ENSDARG00000015676 303 0.85 - 0.850 - - - - - - - NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
56. CNTLN ENSDARG00000033345 128 0.849 - 0.849 - - - - - - - centlein, centrosomal protein [Source:ZFIN;Acc:ZDB-GENE-090313-409]
57. TESK1_1 TESK1_1 276 0.847 - 0.847 - - - - - - -
58. xkr8.3 ENSDARG00000039996 457 0.847 - 0.847 - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-041010-107]
59. tmem64 ENSDARG00000061723, ENSDARG00000113304 62 0.847 0.847 - - - - - - - - transmembrane protein 64 [Source:ZFIN;Acc:ZDB-GENE-060503-182]
60. adam15 ENSDARG00000089213 359 0.846 - - - - - - 0.846 - - ADAM metallopeptidase domain 15 [Source:ZFIN;Acc:ZDB-GENE-070809-4]
61. nsmce4a ENSDARG00000024311 125 0.846 - - - - - - 0.846 - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
62. lrtomt lrtomt 39 0.845 - 0.845 - - - - - - -
63. pycrl pycrl 80 0.845 - 0.845 - - - - - - -
64. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 0.845 - - - - - 0.845 - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
65. PEA15 ENSDARG00000079771 80 0.845 - 0.845 - - - - - - - proliferation and apoptosis adaptor protein 15 [Source:ZFIN;Acc:ZDB-GENE-170119-2]
66. ANKS3 ENSDARG00000038557 235 0.845 - 0.845 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080204-51]
67. zak ENSDARG00000006978, ENSDARG00000044615 80 0.844 - 0.844 - - - - - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
68. ano10b ENSDARG00000018159 535 0.844 0.844 - - - - - - - - anoctamin 10b [Source:ZFIN;Acc:ZDB-GENE-061013-169]
69. zgc:194275 ENSDARG00000074014 130 0.842 - 0.842 - - - - - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
70. mob2a ENSDARG00000023214, ENSDARG00000111189 1740 0.841 - - - - - 0.841 - - - MOB kinase activator 2a [Source:ZFIN;Acc:ZDB-GENE-040718-56]
71. rnaseh2a ENSDARG00000018891 1979 0.839 - - - - - - 0.839 - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
72. egln2 ENSDARG00000062562 2500 0.839 0.839 - - - - - - - - egl-9 family hypoxia-inducible factor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-757]
73. BX005423.3 BX005423.3 33 0.837 - 0.837 - - - - - - -
74. ino80e ENSDARG00000022939, ENSDARG00000101892 216 0.837 - 0.837 - - - - - - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
75. FAM83H FAM83H 190 0.837 - 0.837 - - - - - - -
76. lcp2a ENSDARG00000055955 23 0.837 - 0.837 - - - - - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
77. gtf3c4 ENSDARG00000069538 130 0.835 - 0.835 - - - - - - - general transcription factor IIIC, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-041008-147]
78. snx27b ENSDARG00000016977 2768 0.835 - - - - - - 0.835 - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
79. irg1l ENSDARG00000062788 503 0.835 0.835 - - - - - - - - immunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
80. F2RL2 ENSDARG00000090524 211 0.833 - - - - - 0.833 - - - coagulation factor II (thrombin) receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-110127-4]
81. si:dkey-1f1.3 si:dkey-1f1.3 96 0.832 - 0.832 - - - - - - -
82. DRD5 DRD5 142 0.832 - 0.832 - - - - - - -
83. si:dkey-178a21.3 si:dkey-178a21.3 23 0.831 - 0.831 - - - - - - -
84. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 0.831 - 0.831 - - - - - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
85. SLITRK5 SLITRK5 122 0.831 - 0.831 - - - - - - -
86. mfsd6l ENSDARG00000014761 60 0.831 - 0.831 - - - - - - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
87. plbd1 ENSDARG00000063313 2842 0.831 - - - - - 0.831 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
88. BACH1 BACH1 1021 0.831 - 0.831 - - - - - - -
89. GRM5_1 GRM5_1 18 0.831 - 0.831 - - - - - - -
90. timeless ENSDARG00000078497 1114 0.831 - 0.831 - - - - - - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
91. si:ch211-241n15.1 si:ch211-241n15.1 632 0.83 - 0.830 - - - - - - -
92. fam89b ENSDARG00000069106 294 0.83 - - - - - - 0.830 - - family with sequence similarity 89, member B [Source:ZFIN;Acc:ZDB-GENE-091204-269]
93. zgc:123295 ENSDARG00000056324 361 0.83 0.830 - - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
94. mrpl48 ENSDARG00000035167 1008 0.83 - - - - - - 0.830 - - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
95. tbc1d15 ENSDARG00000057218 224 0.829 - 0.829 - - - - - - - TBC1 domain family, member 15 [Source:ZFIN;Acc:ZDB-GENE-041111-251]
96. alpl ENSDARG00000015546 334 0.829 - - - - - - 0.829 - - alkaline phosphatase, liver/bone/kidney [Source:ZFIN;Acc:ZDB-GENE-040420-1]
97. nsun4 ENSDARG00000021324 482 0.829 - 0.829 - - - - - - - NOL1/NOP2/Sun domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-041212-77]
98. csrp2bp 2642 0.829 - - - - - 0.829 - - - csrp2 binding protein
99. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.828 - - - - - - 0.828 - - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
100. rnf216 ENSDARG00000087893 518 0.827 - 0.827 - - - - - - - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]

There are 828 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA