Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for dbx1a

Gene Name Gene ID Reads Annotation
dbx1a ENSDARG00000086393 3161 developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]










Genes with expression patterns similar to dbx1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dbx1a ENSDARG00000086393 3161 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
2. dbx2 2971 4.359 0.763 0.915 0.962 - - 0.774 0.945 - - developing brain homeobox 2
3. nova2 ENSDARG00000017673 7685 4.16 0.741 0.828 0.851 - - 0.907 0.833 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
4. plp1a ENSDARG00000103732 3544 4.123 0.732 - 0.954 0.776 - 0.825 0.836 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
5. scrt2 ENSDARG00000056175 4331 3.626 - 0.837 - - - 0.852 0.957 - 0.980 scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
6. pax6a ENSDARG00000103379 3061 3.598 0.767 0.949 - - - 0.908 0.974 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
7. neurog1 ENSDARG00000056130 3924 3.532 0.773 0.961 - - - 0.921 0.877 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
8. tuba1c ENSDARG00000055216 8384 3.443 0.729 - 0.950 - - 0.836 0.928 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
9. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 3.431 0.728 - - - - 0.931 0.895 0.877 - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
10. grin1a ENSDARG00000027828 1327 3.427 0.730 - - - - 0.847 0.880 - 0.970 glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
11. nadl1.1 1200 3.384 0.746 0.865 - - - 0.904 0.869 - - neural adhesion molecule L1.1, transcript variant X1
12. nes ENSDARG00000088805 2710 3.38 0.821 0.916 - - - 0.846 0.797 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
13. CU928222.1 ENSDARG00000097436 1662 3.368 0.832 0.941 - - - 0.807 0.788 - -
14. slc35g2b ENSDARG00000045447 378 3.361 0.826 0.953 - - - 0.773 0.809 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
15. ROBO3_1 ROBO3_1 468 3.348 0.772 0.930 - - - 0.719 0.927 - -
16. tox ENSDARG00000032317 9126 3.347 0.780 - 0.908 - - 0.788 0.871 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
17. her2 ENSDARG00000038205 3219 3.323 0.780 - - - - 0.826 0.871 0.846 - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
18. CABZ01029738.1 CABZ01029738.1 327 3.32 0.905 0.936 - - - 0.728 0.751 - -
19. nhlh2 ENSDARG00000025495 1860 3.314 0.784 0.926 - - - 0.789 0.815 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
20. nova1 ENSDARG00000020178 4129 3.284 - 0.700 0.808 - - 0.819 0.957 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
21. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 3.263 - - 0.933 0.705 - 0.796 0.829 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
22. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 3.232 0.880 0.746 - 0.717 - 0.889 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
23. nrarpb ENSDARG00000018958 6225 3.224 0.794 0.778 - - - 0.806 0.846 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
24. fyna ENSDARG00000011370 1679 3.208 0.794 0.703 - - - 0.885 0.826 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
25. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 3.176 0.711 0.917 - - 0.828 - 0.720 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
26. st8sia2 ENSDARG00000018788 2183 3.142 0.863 - - 0.739 - 0.749 0.791 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
27. sncb ENSDARG00000104945 8197 3.117 0.766 0.754 - - - 0.857 - 0.740 - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
28. pou3f2a ENSDARG00000070220 817 3.097 - - - 0.713 - 0.849 0.783 0.752 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
29. syt11a ENSDARG00000057913 1145 2.95 0.703 0.724 - - - 0.717 0.806 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
30. prdm12b ENSDARG00000007430 914 2.773 0.900 - - - - 0.894 0.979 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
31. cadm3 ENSDARG00000057013 1545 2.726 - 0.947 - - - 0.796 0.983 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
32. itm2ca ENSDARG00000043448 1265 2.711 - 0.949 - - - 0.858 0.904 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
33. pax6b ENSDARG00000045936 349 2.699 0.903 - - - - 0.862 0.934 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
34. slc18a3a ENSDARG00000006356 1285 2.689 - 0.867 - - - 0.937 0.885 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
35. mb21d2a mb21d2a 421 2.681 - 0.932 - - - 0.792 0.957 - -
36. gfap ENSDARG00000025301 5584 2.677 0.853 - - - - 0.895 0.929 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
37. MAP1A MAP1A 847 2.677 - 0.908 - - - 0.819 0.950 - -
38. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.674 0.878 - - - - 0.865 0.931 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
39. cdh7 582 2.667 - 0.863 - - - 0.899 0.905 - - cadherin 7, type 2, transcript variant X1
40. sox19b ENSDARG00000040266 532 2.662 - 0.927 - - - 0.909 0.826 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
41. mir10d-1 mir10d-1 860 2.617 - 0.943 - - - 0.780 0.894 - -
42. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.608 0.822 - - - - 0.821 0.965 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
43. stxbp1a ENSDARG00000001994 5154 2.607 - 0.918 - - - 0.790 0.899 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
44. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.605 0.873 - - - - 0.862 0.870 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
45. nell2b ENSDARG00000062797 854 2.601 0.737 - - - - 0.924 0.940 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
46. fam49a ENSDARG00000006672 939 2.601 - - - - - 0.867 0.762 - 0.972 family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
47. CR848045.1 CR848045.1 459 2.6 - 0.822 - - - 0.870 0.908 - -
48. gsx1 ENSDARG00000035735 1243 2.597 - - - - - 0.810 0.924 0.863 - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
49. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.595 - 0.781 - - - 0.925 0.889 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
50. SV2B SV2B 208 2.594 - 0.808 - - - 0.807 0.979 - -
51. id4 ENSDARG00000045131 2916 2.594 - - - - - 0.821 0.810 - 0.963 inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
52. stx1b ENSDARG00000000503 2724 2.585 - 0.769 - - - 0.857 0.959 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
53. chga ENSDARG00000008829 1086 2.569 0.876 - - - - 0.776 0.917 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
54. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.567 - - - - 0.716 0.897 0.954 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
55. amph ENSDARG00000007663 599 2.566 - 0.808 - - - 0.810 0.948 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
56. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.566 - 0.770 - - - 0.895 0.901 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
57. chat chat 463 2.565 0.764 - - - - 0.933 0.868 - -
58. FAM171A2 FAM171A2 707 2.558 0.711 0.892 - - - - 0.955 - -
59. pcdh1gc5 ENSDARG00000104826 10052 2.557 - 0.893 - - - 0.820 0.844 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
60. myt1b ENSDARG00000102879 5411 2.556 - 0.856 - - - 0.871 0.829 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
61. stmn2a ENSDARG00000033234 2272 2.552 - 0.879 - - - 0.739 0.934 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
62. tmie ENSDARG00000069423 305 2.545 0.802 - - - - 0.882 0.861 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
63. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.544 - 0.881 - - - 0.848 0.815 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
64. slc1a2b ENSDARG00000102453 3136 2.54 - 0.860 - - - 0.754 0.926 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
65. npm1b ENSDARG00000037675 5448 2.537 - - 0.880 - 0.906 0.751 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
66. SLC5A7 SLC5A7 453 2.534 - 0.879 - - - 0.725 0.930 - -
67. slc17a6b ENSDARG00000041150 823 2.532 0.862 - - - - 0.795 0.875 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
68. lhx1a ENSDARG00000014018 958 2.531 - 0.818 - - - 0.746 0.967 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
69. snap25a ENSDARG00000020609 4537 2.53 - 0.797 - - - 0.805 0.928 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
70. calca ENSDARG00000056590 150 2.526 - 0.880 - - - 0.759 0.887 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
71. sox21b ENSDARG00000008540 1460 2.524 - 0.821 - 0.823 - - 0.880 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
72. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.523 - 0.757 - - - 0.893 0.873 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
73. rap2ip rap2ip 681 2.517 - 0.815 - - - 0.895 0.807 - -
74. kcnc3a ENSDARG00000055855 1821 2.515 0.723 - - - - 0.836 0.956 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
75. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.513 0.710 0.953 - - - - 0.850 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
76. sv2bb ENSDARG00000060711 196 2.51 - 0.863 - - - 0.731 0.916 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
77. pou3f3a ENSDARG00000042032 2835 2.51 - - - 0.810 - 0.844 0.856 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
78. syt12 ENSDARG00000101776 215 2.509 0.816 - - - - 0.857 0.836 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
79. atp6v0cb ENSDARG00000036577 3472 2.507 0.714 - - - - 0.914 0.879 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
80. TUBB8P7_2 TUBB8P7_2 565 2.504 0.759 - - - - 0.777 0.968 - -
81. SLC35F4 ENSDARG00000103124 55 2.503 0.736 - - - - 0.839 0.928 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
82. irx5b ENSDARG00000074070 459 2.498 0.944 - - - - 0.769 0.785 - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
83. pkib ENSDARG00000053110 527 2.498 0.810 - 0.938 - - - 0.750 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
84. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.496 0.843 - - - - 0.794 0.859 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
85. jag1a ENSDARG00000030289 1275 2.493 0.707 - - - - 0.897 0.889 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
86. si:dkey-169l5.3 si:dkey-169l5.3 239 2.491 0.898 - - - - 0.742 0.851 - -
87. SPOCK1 ENSDARG00000074644 794 2.487 0.816 - - - - 0.801 0.870 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
88. RNF145 RNF145 1364 2.485 - - - - - 0.782 0.730 - 0.973
89. BX957337.1 BX957337.1 1685 2.482 - 0.771 - - - 0.774 0.937 - -
90. scn8aa ENSDARG00000005775 792 2.477 - 0.766 - - - 0.795 0.916 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
91. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.475 0.889 - - 0.718 - - 0.868 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
92. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 2.475 - 0.945 - - - 0.767 0.763 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
93. CBFA2T3 ENSDARG00000079012 6799 2.474 - - - - - 0.746 0.775 - 0.953 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
94. dla ENSDARG00000010791 9281 2.472 0.718 0.888 - - - - 0.866 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
95. si:ch73-21g5.7 ENSDARG00000093156 9412 2.468 0.735 0.861 - - - - 0.872 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
96. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.45 - - 0.964 - - 0.755 0.731 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
97. skor1b ENSDARG00000062448, ENSDARG00000112341 282 2.444 0.707 - - - - 0.763 0.974 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
98. cplx2l ENSDARG00000018997 3975 2.444 0.712 0.784 - - - - 0.948 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
99. elavl4 ENSDARG00000045639 998 2.444 - 0.782 - - - 0.734 0.928 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
100. CR548630.1 CR548630.1 3301 2.442 - - 0.955 - 0.700 0.787 - - -

There are 2032 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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