Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for dbr1

Gene Name Gene ID Reads Annotation
dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]










Genes with expression patterns similar to dbr1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
2. tmem50a ENSDARG00000015757 3244 2.766 - - 0.969 - 0.979 0.818 - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
3. eng1b eng1b 2544 2.691 - - 0.945 - 0.986 - - - 0.760
4. lin54 ENSDARG00000063194 2583 1.952 - - 0.969 - 0.983 - - - - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
5. lima1 lima1 4760 1.926 - - 0.950 - 0.976 - - - -
6. DLC1 ENSDARG00000079317 2149 1.923 - - 0.966 - 0.957 - - - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
7. TUBB8P7_1 TUBB8P7_1 2722 1.919 - - 0.940 - 0.979 - - - -
8. arhgap24 ENSDARG00000100973 1105 1.896 - - 0.965 - - - - - 0.931 Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
9. axin2 ENSDARG00000100149 4223 1.891 - - 0.963 - 0.928 - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
10. hexim1 ENSDARG00000036482 4317 1.871 - - 0.937 - 0.934 - - - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
11. ephb4a ENSDARG00000100725 1749 1.86 - - - - 0.975 - - - 0.885 eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
12. ube4b ENSDARG00000037017 8012 1.848 - - 0.976 - 0.872 - - - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
13. FBXO33 ENSDARG00000075400 1164 1.846 - - - - 0.990 - - - 0.856 F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
14. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.842 - - 0.947 - - 0.895 - - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
15. sort1b ENSDARG00000056252 2652 1.823 - - 0.941 - - - - - 0.882 sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
16. casc5 1487 1.815 - - - - 0.988 0.827 - - - cancer susceptibility candidate 5, transcript variant X3
17. acadvl ENSDARG00000016687 5329 1.811 - - 0.925 - 0.886 - - - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
18. rpl7l1 ENSDARG00000042864 3256 1.804 - - 0.931 - 0.873 - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
19. csnk1g2a ENSDARG00000005458 2917 1.803 - - - - 0.970 0.833 - - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
20. C6H2orf40 C6H2orf40 4224 1.797 - - 0.951 - - 0.846 - - -
21. c1galt1c1 ENSDARG00000036335 1623 1.796 - - 0.962 - - 0.834 - - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
22. mdh1a mdh1a 11035 1.794 - - 0.927 - 0.867 - - - -
23. cyp7c1 cyp7c1 1214 1.787 - - 0.961 - - 0.826 - - -
24. ctdspl2b ENSDARG00000060586 1682 1.784 - - - - 0.982 - - 0.802 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
25. hsbp1a ENSDARG00000069425 1086 1.772 - - 0.968 - - 0.804 - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
26. safb ENSDARG00000020467 5608 1.77 - - 0.957 - - 0.813 - - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
27. atl3 ENSDARG00000004270 2806 1.769 - - - - 0.975 0.794 - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
28. psmb6 ENSDARG00000002240 8015 1.768 - - - - 0.976 0.792 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
29. si:ch211-150o23.2 ENSDARG00000092746 788 1.767 - - - - 0.990 0.777 - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
30. ptpn1 ENSDARG00000007923 3647 1.764 - - 0.974 - - - - - 0.790 protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
31. TMEM30B ENSDARG00000054122 1519 1.748 - - 0.952 - - 0.796 - - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
32. fbl ENSDARG00000053912 5891 1.74 - - 0.955 - - 0.785 - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
33. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.726 - - 0.966 - - 0.760 - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
34. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 1.725 - - - - - 0.900 - - 0.825 si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
35. ENSDARG00000086666 ENSDARG00000086666 2159 1.711 - - 0.838 - - - - - 0.873
36. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.709 - - - - - 0.867 - - 0.842 ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
37. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.703 - - - - - 0.833 - - 0.870 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
38. smim8 ENSDARG00000071040 622 1.7 - - - - - 0.849 - - 0.851 small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
39. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.699 - - - - 0.964 - 0.735 - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
40. nr2f1a ENSDARG00000052695 5037 1.695 - - 0.861 - 0.834 - - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
41. CU633999.1 ENSDARG00000098197 2880 1.692 - - - - 0.983 0.709 - - -
42. slc6a19b ENSDARG00000056719 140 1.69 - - - - - 0.841 - - 0.849 solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
43. h2afx ENSDARG00000029406 2116 1.689 - - - - 0.939 - 0.750 - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
44. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 1.684 - - 0.966 - - 0.718 - - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
45. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.681 - - - - - 0.889 - - 0.792 v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
46. prkcda ENSDARG00000009208 1508 1.68 - - 0.957 - - 0.723 - - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
47. slc12a9 ENSDARG00000060366 293 1.679 - - - - - 0.834 - - 0.845 solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
48. alox12 ENSDARG00000069463 5787 1.675 - - 0.864 - - 0.811 - - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
49. cldnb ENSDARG00000009544 6036 1.671 - - - - - 0.804 - - 0.867 claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
50. eif3m ENSDARG00000013931 8117 1.671 - - 0.847 - 0.824 - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
51. stk10 ENSDARG00000101894 1587 1.665 - - - - - 0.846 - - 0.819 serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
52. apol1 ENSDARG00000007425, ENSDARG00000110882 1161 1.662 - - 0.951 - - 0.711 - - - apolipoprotein L, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3217]
53. stxbp2 ENSDARG00000007603 1646 1.66 - - - - - 0.783 - - 0.877 syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
54. plcd1b ENSDARG00000034080 4074 1.658 - - 0.822 - - - - - 0.836 phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
55. lgals1l1 ENSDARG00000088711 4515 1.648 - - 0.890 - - 0.758 - - - lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
56. cbfa2t2 ENSDARG00000074337 4323 1.644 - - - - 0.906 0.738 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
57. snrpa1 ENSDARG00000024651 3306 1.643 - - - - - - 0.736 - 0.907 small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
58. TSPY2 TSPY2 1371 1.623 - - - - - 0.892 0.731 - -
59. ppm1bb ENSDARG00000011496 10196 1.623 - - - - 0.796 - - - 0.827 protein phosphatase, Mg2+/Mn2+ dependent, 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-185]
60. lrba ENSDARG00000031108 2136 1.622 - - - - - 0.738 - - 0.884 LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
61. rbm8a ENSDARG00000016516 8789 1.622 - - - - 0.776 - - - 0.846 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
62. pbx2 ENSDARG00000019717 6892 1.618 - - 0.859 - - 0.759 - - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
63. tns1 tns1 5891 1.612 - - - - 0.863 0.749 - - -
64. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 1.612 - - - - - 0.786 - - 0.826 cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
65. pde4ba ENSDARG00000032868, ENSDARG00000110575 1024 1.61 - - - - - 0.706 - - 0.904 phosphodiesterase 4B, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-030131-9570]
66. U6 U6 931 1.603 - 0.746 - - - - - - 0.857
67. PEG3_5 PEG3_5 1624 1.6 - - - - - - 0.755 - 0.845
68. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.597 - - - - 0.879 - - - 0.718 myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
69. tuft1b ENSDARG00000071010 909 1.596 - - - - - 0.786 - - 0.810 tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
70. hibch ENSDARG00000054867 885 1.594 - 0.785 - - - 0.809 - - - 3-hydroxyisobutyryl-CoA hydrolase [Source:ZFIN;Acc:ZDB-GENE-050327-29]
71. ttk ENSDARG00000041361 3911 1.593 - - 0.881 - - 0.712 - - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
72. zgc:194839 ENSDARG00000078550 4003 1.592 - - - - - 0.703 - - 0.889 zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
73. CACUL1 ENSDARG00000021885 691 1.592 - - - - - 0.742 - - 0.850 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
74. selj 884 1.579 - 0.733 - - - 0.846 - - - selenoprotein J
75. mpc2 ENSDARG00000024478 16959 1.578 - - 0.724 - 0.854 - - - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
76. CUL3 CUL3 1133 1.566 - - - - - 0.859 0.707 - -
77. bc2 5213 1.56 - - - - - 0.827 - - 0.733 putative breast adenocarcinoma marker
78. nphp3 ENSDARG00000078261 110 1.559 - - - - - 0.836 0.723 - - nephronophthisis 3 [Source:ZFIN;Acc:ZDB-GENE-091204-117]
79. meis2b ENSDARG00000077840 5166 1.559 - - - - 0.836 0.723 - - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
80. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 1.559 - - - - - 0.840 0.719 - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
81. g6pd ENSDARG00000071065, ENSDARG00000111009 1618 1.559 - - - - - 0.726 - - 0.833 glucose-6-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070508-4]
82. itgbl1 ENSDARG00000040985 705 1.555 - - - - - 0.765 - - 0.790 integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
83. eif5 ENSDARG00000003681 7986 1.555 - - 0.823 - - 0.732 - - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
84. pias2 ENSDARG00000092979, ENSDARG00000115060 2317 1.552 - 0.745 - - - 0.807 - - - protein inhibitor of activated STAT, 2 [Source:ZFIN;Acc:ZDB-GENE-060424-1]
85. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.549 - 0.748 - - - 0.801 - - - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
86. si:dkeyp-118b1.2 ENSDARG00000079131 705 1.545 - - 0.738 - - - 0.807 - - si:dkeyp-118b1.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7685]
87. sppl2 ENSDARG00000030448 1040 1.54 - - - - - - 0.701 - 0.839 signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
88. rbm17 ENSDARG00000031346 2079 1.518 - 0.739 - - - 0.779 - - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
89. eif4ebp2 ENSDARG00000031819 13168 1.499 - - - - 0.773 - - - 0.726 eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
90. mrpl48 ENSDARG00000035167 1008 1.495 - - - - - 0.793 0.702 - - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
91. ddx39ab ENSDARG00000015111 11619 1.469 - 0.737 0.732 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
92. fam89a ENSDARG00000079979 4375 1.464 - 0.702 - - - - - - 0.762 family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
93. TEAD3 TEAD3 8614 1.45 - - 0.740 - - 0.710 - - -
94. ZNF281 ZNF281 1946 1.441 - - - - - 0.721 - - 0.720
95. ppp6r3 ENSDARG00000013379 2912 1.429 - 0.707 - - 0.722 - - - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
96. larp7 ENSDARG00000017315 1194 0.995 - - - - 0.995 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
97. med13b ENSDARG00000003910 1143 0.994 - - - - 0.994 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
98. si:dkey-20j1.4 si:dkey-20j1.4 406 0.994 - - - - 0.994 - - - -
99. cuedc2 ENSDARG00000039365 484 0.994 - - - - 0.994 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
100. pfkpb ENSDARG00000012801 223 0.993 - - - - 0.993 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]

There are 1503 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA