Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cxcr4a

Gene Name Gene ID Reads Annotation
cxcr4a ENSDARG00000057633 1829 chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]










Genes with expression patterns similar to cxcr4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cxcr4a ENSDARG00000057633 1829 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
2. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 2.448 - 0.725 - 0.751 - - - - 0.972 hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
3. mllt3 ENSDARG00000006754 985 2.443 - - - - 0.712 0.790 - 0.941 - MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]
4. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 2.405 - 0.758 - 0.780 - - - - 0.867 distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
5. im:7150988 ENSDARG00000109310 28520 2.354 - - 0.817 - 0.749 - - - 0.788 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
6. golgb1 ENSDARG00000061951 2023 2.336 - - - - - 0.795 0.715 - 0.826 golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
7. kazald2 ENSDARG00000078518 3062 2.301 - 0.806 - 0.759 0.736 - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
8. prc1a ENSDARG00000100918 1746 1.805 - - - - - - - 0.931 0.874 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
9. RNF5 ENSDARG00000075606 1730 1.792 - - - - - - - 0.924 0.868 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
10. sppl2 ENSDARG00000030448 1040 1.774 - - - - - - - 0.919 0.855 signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
11. PVRL4 1691 1.771 - - - - - 0.851 - - 0.920 poliovirus receptor-related 4
12. timp2a ENSDARG00000061226, ENSDARG00000114336 1756 1.747 - - 0.912 - - - - - 0.835 TIMP metallopeptidase inhibitor 2a [Source:ZFIN;Acc:ZDB-GENE-030612-1]
13. dlg5a ENSDARG00000074059 1834 1.74 - - - - - - - 0.879 0.861 discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
14. ogn 5002 1.707 - - - - 0.793 - - - 0.914 osteoglycin
15. nedd8 ENSDARG00000007989 3896 1.705 - - 0.896 - - - - - 0.809 neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
16. vcana ENSDARG00000103515 611 1.701 - 0.765 - - - - - - 0.936 versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
17. srsf9 ENSDARG00000008097 2405 1.699 - - - - - 0.847 - 0.852 - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
18. agpat3 ENSDARG00000036549 1093 1.695 - - - - - 0.759 - 0.936 - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
19. xylt1 ENSDARG00000061248 2357 1.674 - - - - - - - 0.885 0.789 xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
20. shc1 ENSDARG00000075437 3278 1.672 - 0.811 - - - - - 0.861 - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
21. mvp ENSDARG00000021242 6875 1.669 - - - - - - - 0.793 0.876 major vault protein [Source:ZFIN;Acc:ZDB-GENE-030826-33]
22. tacc1 ENSDARG00000073753 1127 1.667 - - - - - - 0.788 - 0.879 transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
23. mmp9 ENSDARG00000042816 298 1.662 - - - - - 0.790 - - 0.872 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
24. C20H1orf198 C20H1orf198 246 1.642 - 0.705 - - - - - 0.937 -
25. dusp11 ENSDARG00000038156 2490 1.636 - - - - - - 0.718 0.918 - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
26. hbegfa ENSDARG00000075121 1865 1.634 - - - - - 0.770 - - 0.864 heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
27. CASKIN2_1 CASKIN2_1 2299 1.63 - - - 0.700 - - - 0.930 -
28. trim35-28 ENSDARG00000021021 1380 1.629 - - - - - - 0.725 - 0.904 tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
29. sp9 ENSDARG00000099374 2266 1.627 - 0.891 - - 0.736 - - - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
30. id3 ENSDARG00000054823 3484 1.627 - - - - - - - 0.786 0.841 inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
31. daam1a ENSDARG00000015059 1460 1.627 - - - - - 0.705 - - 0.922 dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
32. optn ENSDARG00000002663, ENSDARG00000111364 1440 1.624 - - - - - - 0.723 0.901 - optineurin [Source:ZFIN;Acc:ZDB-GENE-030131-8103]
33. MON1B_1 MON1B_1 697 1.622 0.754 - - - - - - - 0.868
34. pi15a ENSDARG00000045378 2361 1.621 - - - 0.739 - - - 0.882 - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
35. gna12a ENSDARG00000025826 1769 1.615 - - - - - 0.773 - - 0.842 guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
36. coro2a ENSDARG00000005210 1479 1.608 - 0.757 - - - - - - 0.851 coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
37. sec31b ENSDARG00000002916 1792 1.606 - - - - - - - 0.718 0.888 SEC31 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-060418-2]
38. pdlim2 ENSDARG00000069956 317 1.605 0.822 - - - - 0.783 - - - PDZ and LIM domain 2 (mystique) [Source:ZFIN;Acc:ZDB-GENE-070308-4]
39. msxa msxa 263 1.603 - - - 0.728 - - - - 0.875
40. aldh3b1 ENSDARG00000013839 796 1.602 0.709 - - - - - - 0.893 - aldehyde dehydrogenase 3 family, member B1 [Source:ZFIN;Acc:ZDB-GENE-021120-3]
41. stom ENSDARG00000003835, ENSDARG00000109478, ENSDARG00000109779 5514 1.59 - 0.710 - - - - - 0.880 - stomatin [Source:ZFIN;Acc:ZDB-GENE-980526-486]
42. CABZ01088509.1 CABZ01088509.1 1213 1.564 0.706 - - - - - - - 0.858
43. schip1 ENSDARG00000035175 3838 1.559 - - - - - - - 0.832 0.727 schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
44. ntd5 ENSDARG00000040944 4988 1.541 - - - 0.728 0.813 - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
45. si:dkey-193c22.2 ENSDARG00000076735 2791 1.53 - 0.809 - - 0.721 - - - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
46. rpe65b ENSDARG00000094752, ENSDARG00000113621 463 1.529 0.726 0.803 - - - - - - - retinal pigment epithelium-specific protein 65b [Source:ZFIN;Acc:ZDB-GENE-050410-16]
47. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 1.524 - - - - - 0.728 0.796 - - wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
48. sphk2 ENSDARG00000069893 1518 1.512 - 0.718 - - - 0.794 - - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
49. cdh1 ENSDARG00000102750 8654 1.491 - - - - - 0.769 - - 0.722 cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
50. EPHB3 2215 1.49 - 0.743 - - - 0.747 - - - EPH receptor B3
51. sh3gl1a ENSDARG00000067958 1105 1.471 - - - 0.724 - - 0.747 - - SH3-domain GRB2-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4524]
52. col14a1a ENSDARG00000005762 4778 1.465 - 0.718 - 0.747 - - - - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
53. soga1 ENSDARG00000063075 1066 1.463 - 0.753 - - - 0.710 - - - suppressor of glucose, autophagy associated 1 [Source:ZFIN;Acc:ZDB-GENE-090313-188]
54. si:ch211-217k17.9 ENSDARG00000093494 3452 1.447 - - - - 0.728 - - - 0.719 si:ch211-217k17.9 [Source:ZFIN;Acc:ZDB-GENE-061207-21]
55. wdr45 ENSDARG00000090219 829 1.444 - 0.720 0.724 - - - - - - WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
56. rbp2a ENSDARG00000070038, ENSDARG00000115141 1688 1.436 - 0.714 - - - - 0.722 - - retinol binding protein 2a, cellular [Source:ZFIN;Acc:ZDB-GENE-020320-2]
57. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.424 - 0.719 0.705 - - - - - - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
58. chp2 ENSDARG00000025788, ENSDARG00000113942 460 0.971 - - - - - - - 0.971 - calcineurin-like EF-hand protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5810]
59. frem1a ENSDARG00000069473 1847 0.968 - - - - - - - - 0.968 Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
60. CITED1 ENSDARG00000077769 692 0.963 - - - - - - - 0.963 - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5596]
61. dnm1l ENSDARG00000015006 1729 0.962 - - - - - - - 0.962 - dynamin 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-1556]
62. fgf24 ENSDARG00000037677 242 0.958 - - - - - - - - 0.958 fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
63. tmem181 ENSDARG00000045910 2288 0.956 - - - - - - - - 0.956 transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
64. tnfaip8l2b ENSDARG00000046148 1133 0.955 - - - - - - - - 0.955 tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
65. unc119b ENSDARG00000044362 1528 0.954 - - - - - - - 0.954 - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
66. arhgap24 ENSDARG00000100973 1105 0.952 - - - - - - - - 0.952 Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
67. CEP152 ENSDARG00000075725 391 0.952 0.952 - - - - - - - - centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
68. asap2b ENSDARG00000019564 1660 0.947 - - - - - - - - 0.947 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
69. psd3l ENSDARG00000104820 1201 0.946 - - - - - - - 0.946 - pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
70. nup155 ENSDARG00000001777 3417 0.944 - - - - - - - 0.944 - nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
71. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 0.944 - - - - - - - - 0.944 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
72. GPR101 ENSDARG00000039218 157 0.942 - - - - - - - 0.942 - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
73. sult4a1 ENSDARG00000101967 205 0.942 - - - - - - - 0.942 - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
74. plat ENSDARG00000062707 491 0.942 - - - - - - - 0.942 - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
75. itga11a ENSDARG00000036086, ENSDARG00000111495 254 0.942 - - - - - - - 0.942 - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
76. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 0.941 - - - - - - - 0.941 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
77. ptprz1b ENSDARG00000020871 435 0.94 - - - - - - - 0.940 - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
78. mfsd5 ENSDARG00000015997 570 0.94 - - - - - - - 0.940 - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
79. zgc:112962 ENSDARG00000069102 431 0.94 - - - - - - - 0.940 - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]
80. dmap1 ENSDARG00000042087 755 0.94 - - - - - - - 0.940 - DNA methyltransferase 1 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-748]
81. CABZ01069006.1 CABZ01069006.1 363 0.94 - - - - - - - 0.940 -
82. SPAG9 ENSDARG00000078142 629 0.939 - - - - - - - 0.939 - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
83. si:dkey-117p18.2 si:dkey-117p18.2 104 0.939 - - - - - - - 0.939 -
84. si:ch211-241n15.2 si:ch211-241n15.2 435 0.939 - - - - - - - 0.939 -
85. sort1b ENSDARG00000056252 2652 0.938 - - - - - - - - 0.938 sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
86. l3mbtl1a ENSDARG00000014828 119 0.938 - - - - - - - 0.938 - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
87. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.938 - - - - - - - 0.938 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
88. slc29a4 ENSDARG00000059690 478 0.938 - - - - - - - 0.938 - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
89. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.938 - - - - - - - 0.938 - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
90. ftr15 122 0.938 - - - - - - - 0.938 - finTRIM family, member 15
91. cetn3 ENSDARG00000011825 1087 0.938 - - - - - - - 0.938 - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
92. kif7 ENSDARG00000033099 971 0.938 - - - - - - - 0.938 - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
93. cks2 ENSDARG00000071410, ENSDARG00000116198 966 0.938 - - - - - - - 0.938 - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
94. lig4 ENSDARG00000060620 369 0.938 - - - - - - - 0.938 - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
95. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 0.938 - - - - - - - 0.938 - ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
96. cbll1 ENSDARG00000015222 995 0.937 - - - - - - - 0.937 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
97. tbl3 ENSDARG00000052344 1530 0.937 - - - - - - - 0.937 - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
98. kdm5bb ENSDARG00000003098 531 0.937 - - - - - - - 0.937 - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
99. mul1b ENSDARG00000052527 431 0.937 - - - - - - - 0.937 - mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
100. ankrd37 ENSDARG00000056376 131 0.937 - - - - - - - 0.937 - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]

There are 1084 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA