Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cxcl12b

Gene Name Gene ID Reads Annotation
cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]










Genes with expression patterns similar to cxcl12b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
2. si:dkey-261h17.1 ENSDARG00000095268 11403 2.297 - - 0.734 - - 0.819 0.744 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
3. BX511121.1 ENSDARG00000029997 1774 2.287 - - 0.814 0.734 - - - - 0.739
4. sgut1 3470 1.772 - 0.998 - - - - - - 0.774 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
5. clec14a ENSDARG00000103533 718 1.767 - - - - - 0.893 0.874 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
6. METTL21C METTL21C 1717 1.754 - 0.993 - - - 0.761 - - -
7. she ENSDARG00000087956 941 1.73 - - - - - 0.893 0.837 - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
8. sort1b ENSDARG00000056252 2652 1.7 - 0.988 - 0.712 - - - - - sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
9. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.7 - 0.982 - - - - - - 0.718 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
10. ecscr ENSDARG00000087457 319 1.682 - - - - - 0.912 0.770 - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:ZFIN;Acc:ZDB-GENE-050411-37]
11. sox18 ENSDARG00000058598 678 1.68 - - - - - 0.825 0.855 - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
12. col8a2 ENSDARG00000060893 504 1.654 - - - - - 0.810 0.844 - - collagen, type VIII, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060503-488]
13. NDNF ENSDARG00000062936 7287 1.651 - - - 0.852 - - 0.799 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
14. aplp2 ENSDARG00000054864 7958 1.607 - 0.883 - 0.724 - - - - - amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]
15. arid3b ENSDARG00000104034 16303 1.606 - - - 0.773 0.833 - - - - AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
16. pdzk1 ENSDARG00000022261 398 1.603 - - - - - 0.859 - - 0.744 PDZ domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-031222-1]
17. THOP1 ENSDARG00000013776 2717 1.6 - - - - - - 0.721 - 0.879 thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
18. mrc1a ENSDARG00000102100 1260 1.59 - - - - - 0.877 0.713 - - mannose receptor, C type 1a [Source:ZFIN;Acc:ZDB-GENE-090915-4]
19. fli1a ENSDARG00000054632 330 1.586 - - - - - 0.876 0.710 - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
20. sp5l ENSDARG00000115868 361 1.586 - - 0.841 0.745 - - - - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
21. CPXM1 CPXM1 201 1.584 - - - - - 0.790 0.794 - -
22. tnfaip8l3 ENSDARG00000088709 345 1.582 0.739 - - - - 0.843 - - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
23. mfap4 ENSDARG00000090783 480 1.577 0.818 - - - - - - - 0.759 microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
24. efhc2 ENSDARG00000004204 59 1.553 - - - 0.731 - 0.822 - - - EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]
25. grem2 grem2 743 1.544 - - - - - 0.755 0.789 - -
26. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 1.539 - - - - - 0.761 - - 0.778 ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
27. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 1.536 - - 0.780 - - 0.756 - - - mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
28. fam212aa 1132 1.535 - - - - - 0.747 0.788 - - family with sequence similarity 212, member Aa, transcript variant X1
29. CDC42EP1_1 CDC42EP1_1 449 1.53 0.776 - - - - - - - 0.754
30. cdx4 ENSDARG00000036292 1225 1.529 - 0.824 0.705 - - - - - - caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
31. exoc3l2a ENSDARG00000008414 227 1.52 - - - - - 0.806 0.714 - - exocyst complex component 3-like 2a [Source:ZFIN;Acc:ZDB-GENE-060526-343]
32. CU929394.1 CU929394.1 405 1.515 - - - 0.768 - - - - 0.747
33. hoxd13a ENSDARG00000059256 1190 1.511 - - 0.755 0.756 - - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
34. ncf1 ENSDARG00000033735 83 1.509 0.726 - - - - 0.783 - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
35. si:dkey-45k15.1 ENSDARG00000061714 32 1.497 0.726 - - - - 0.771 - - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
36. frem1b ENSDARG00000062402 750 1.496 - - - - - 0.710 0.786 - - Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]
37. CABZ01018247.1 CABZ01018247.1 609 1.493 - - - - - 0.757 0.736 - -
38. frem2a ENSDARG00000076856 11022 1.475 - - 0.731 0.744 - - - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
39. zgc:86811 ENSDARG00000035573 958 1.473 - - - - - - 0.722 - 0.751 zgc:86811 [Source:ZFIN;Acc:ZDB-GENE-040625-113]
40. pank2 ENSDARG00000003311 881 1.464 - - - 0.712 - - - - 0.752 pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
41. lmo2 ENSDARG00000095019 1098 1.463 - - - - - 0.706 0.757 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
42. dctn3 ENSDARG00000041363 3351 1.453 - - - - 0.706 - - - 0.747 dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
43. enkur ENSDARG00000031248 427 1.443 - - - 0.713 - 0.730 - - - enkurin, TRPC channel interacting protein [Source:ZFIN;Acc:ZDB-GENE-070718-1]
44. dnajc3 dnajc3 802 0.999 - 0.999 - - - - - - -
45. sh3bp4a ENSDARG00000020000 1049 0.999 - 0.999 - - - - - - - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
46. cep44 ENSDARG00000053106 683 0.999 - 0.999 - - - - - - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
47. CR387996.1 ENSDARG00000097774 3037 0.999 - 0.999 - - - - - - -
48. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 0.999 - 0.999 - - - - - - - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
49. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 0.999 - 0.999 - - - - - - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
50. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.999 - 0.999 - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
51. pgam5 ENSDARG00000035608 4044 0.999 - 0.999 - - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
52. tdh ENSDARG00000002745 5344 0.999 - 0.999 - - - - - - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
53. tmem209 ENSDARG00000039340 1598 0.999 - 0.999 - - - - - - - transmembrane protein 209 [Source:ZFIN;Acc:ZDB-GENE-030131-2879]
54. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.999 - 0.999 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
55. samd1a ENSDARG00000102810 1037 0.999 - 0.999 - - - - - - - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
56. utp23 ENSDARG00000105012 1346 0.999 - 0.999 - - - - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
57. abl1 ENSDARG00000035187 3553 0.999 - 0.999 - - - - - - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
58. foxo1b ENSDARG00000061549 790 0.999 - 0.999 - - - - - - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]
59. mcfd2 ENSDARG00000039757, ENSDARG00000109631, ENSDARG00000116502 1804 0.999 - 0.999 - - - - - - - multiple coagulation factor deficiency 2 [Source:ZFIN;Acc:ZDB-GENE-041010-8]
60. socs6b ENSDARG00000015863 1799 0.999 - 0.999 - - - - - - - suppressor of cytokine signaling 6b [Source:ZFIN;Acc:ZDB-GENE-030131-1670]
61. mrpl13 ENSDARG00000056903 2768 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
62. rpl3 ENSDARG00000003599 797 0.999 - 0.999 - - - - - - - ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291]
63. nr5a2 ENSDARG00000100940 1488 0.999 - 0.999 - - - - - - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
64. mao ENSDARG00000023712 1448 0.999 - 0.999 - - - - - - - monoamine oxidase [Source:ZFIN;Acc:ZDB-GENE-040329-3]
65. cped1 ENSDARG00000045747 1024 0.999 - 0.999 - - - - - - - cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
66. ing2 ENSDARG00000104907 1336 0.999 - 0.999 - - - - - - - inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
67. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 0.999 - 0.999 - - - - - - - akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
68. pdxkb ENSDARG00000036546 721 0.998 - 0.998 - - - - - - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
69. lum ENSDARG00000045580 5395 0.998 - 0.998 - - - - - - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
70. CR381676.2 CR381676.2 1591 0.998 - 0.998 - - - - - - -
71. tuba1c ENSDARG00000055216 8384 0.998 - 0.998 - - - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
72. KLB ENSDARG00000076294 595 0.998 - 0.998 - - - - - - - klotho beta [Source:ZFIN;Acc:ZDB-GENE-110909-4]
73. FP102892.2 FP102892.2 809 0.998 - 0.998 - - - - - - -
74. slc38a10 ENSDARG00000077081 1691 0.998 - 0.998 - - - - - - - solute carrier family 38, member 10 [Source:ZFIN;Acc:ZDB-GENE-050309-21]
75. sdad1 ENSDARG00000105117 2819 0.998 - 0.998 - - - - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
76. myh10 ENSDARG00000000103 7522 0.998 - 0.998 - - - - - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
77. arnt2 ENSDARG00000103697 5731 0.998 - 0.998 - - - - - - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
78. LIMA1 LIMA1 908 0.998 - 0.998 - - - - - - -
79. ror2 ENSDARG00000076227, ENSDARG00000116710 1498 0.998 - 0.998 - - - - - - - receptor tyrosine kinase-like orphan receptor 2 [Source:ZFIN;Acc:ZDB-GENE-060427-5]
80. PLEKHG4 ENSDARG00000075964 2860 0.998 - 0.998 - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
81. C20H12orf57 C20H12orf57 3325 0.997 - 0.997 - - - - - - -
82. ppp1cab ENSDARG00000071566 4350 0.997 - 0.997 - - - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
83. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 0.997 - 0.997 - - - - - - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
84. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 0.997 - 0.997 - - - - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
85. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 0.997 - 0.997 - - - - - - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
86. snrpa1 ENSDARG00000024651 3306 0.997 - 0.997 - - - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
87. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.997 - 0.997 - - - - - - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
88. TBC1D24 ENSDARG00000069339 1300 0.996 - 0.996 - - - - - - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
89. tomm7 ENSDARG00000067717 4452 0.996 - 0.996 - - - - - - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
90. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 0.996 - 0.996 - - - - - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
91. mrpl54 ENSDARG00000071468 2715 0.995 - 0.995 - - - - - - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
92. cstf3 ENSDARG00000018904 6111 0.995 - 0.995 - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
93. NAT16 ENSDARG00000086222 4682 0.995 - 0.995 - - - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
94. igf2bp3 ENSDARG00000010266 5789 0.994 - 0.994 - - - - - - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
95. nhp2l1b nhp2l1b 3898 0.994 - 0.994 - - - - - - -
96. col12a1b ENSDARG00000019601 9985 0.993 - 0.993 - - - - - - - collagen, type XII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-120215-116]
97. cux1a ENSDARG00000078459 3914 0.993 - 0.993 - - - - - - - cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
98. srsf5b ENSDARG00000027734 6996 0.993 - 0.993 - - - - - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
99. nsa2 ENSDARG00000007708 6329 0.992 - 0.992 - - - - - - - NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
100. nme3 ENSDARG00000100990 3889 0.992 - 0.992 - - - - - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]

There are 763 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA