Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cxcl12a

Gene Name Gene ID Reads Annotation
cxcl12a ENSDARG00000037116 5433 chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]










Genes with expression patterns similar to cxcl12a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cxcl12a ENSDARG00000037116 5433 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
2. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 2.405 - 0.980 - - - 0.723 0.702 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
3. dnttip2 ENSDARG00000057648 2381 1.959 0.978 - - 0.981 - - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
4. C18H15orf39 C18H15orf39 1125 1.955 0.972 0.983 - - - - - - -
5. pon2 ENSDARG00000016856 1382 1.954 0.978 0.976 - - - - - - - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
6. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 1.951 - 0.979 - 0.972 - - - - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
7. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.928 0.970 0.958 - - - - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
8. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.917 - 0.949 - 0.968 - - - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
9. arpc4 ENSDARG00000054063 6150 1.895 0.955 - - 0.940 - - - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
10. anp32b ENSDARG00000023330 25013 1.834 0.920 - - 0.914 - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
11. srsf3b ENSDARG00000059360 14888 1.81 0.942 - - 0.868 - - - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
12. slc6a8 ENSDARG00000043646 1114 1.797 - 0.985 - - - - 0.812 - - solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]
13. dhrs7c dhrs7c 1173 1.791 0.981 - - - - - 0.810 - -
14. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.787 0.977 - - - - - 0.810 - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
15. slc25a12 ENSDARG00000102362 2773 1.787 - - - 0.973 - - 0.814 - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
16. trim63 trim63 2437 1.779 - 0.982 - - - - 0.797 - -
17. ndufs6 ENSDARG00000056583 7220 1.778 - - - 0.970 - - 0.808 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
18. sgcd ENSDARG00000098573 4980 1.777 - 0.956 - - - - 0.821 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
19. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 1.758 0.986 - - - - - 0.772 - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
20. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 1.755 - 0.977 - - - - 0.778 - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
21. tgfb3 ENSDARG00000019367 2327 1.751 - 0.984 - - - - 0.767 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
22. trdn ENSDARG00000041779 4283 1.745 - - - 0.969 - - 0.776 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
23. CD99L2 ENSDARG00000056722 5588 1.744 - 0.764 - 0.980 - - - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
24. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.735 0.931 - - - - - 0.804 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
25. ndufa9 ndufa9 8846 1.734 0.962 - - - - - 0.772 - -
26. bin1 bin1 3199 1.726 - 0.953 - - - - 0.773 - -
27. BX323459.1 ENSDARG00000109508 1476 1.723 - - - 0.981 - - 0.742 - -
28. kpna2 ENSDARG00000038066 7954 1.723 - 0.972 - - - - - 0.751 - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
29. ivd ENSDARG00000042853, ENSDARG00000112920 1526 1.707 0.979 - - - - - 0.728 - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
30. ube2h ENSDARG00000000019 9900 1.704 - 0.769 - 0.935 - - - - - ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
31. timm8b ENSDARG00000055708 7291 1.701 - - - 0.937 - - 0.764 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
32. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.7 - 0.959 - - - - - 0.741 - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
33. acadvl ENSDARG00000016687 5329 1.698 - 0.973 - - - - 0.725 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
34. ppm1la ENSDARG00000063218 2142 1.697 0.979 - - - - - 0.718 - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
35. histh1l ENSDARG00000035519 12293 1.696 0.966 0.730 - - - - - - - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
36. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 1.691 - 0.945 - - - - 0.746 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
37. serpinh1a ENSDARG00000075954 6488 1.685 0.966 0.719 - - - - - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
38. atp5j 4272 1.684 0.961 - - - - - 0.723 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
39. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.67 - 0.958 - - - - 0.712 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
40. hspe1 ENSDARG00000056167 21636 1.661 0.931 - - 0.730 - - - - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
41. flncb ENSDARG00000018820 5595 1.659 - 0.913 - - - - 0.746 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
42. cct3 ENSDARG00000016173 15869 1.65 - 0.847 - - - - 0.803 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
43. gars ENSDARG00000059070 17015 1.644 - 0.927 - - - - 0.717 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
44. pkp3 pkp3 9767 1.624 0.820 0.804 - - - - - - -
45. IDH2 ENSDARG00000003795 18659 1.611 0.803 - - 0.808 - - - - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
46. cox6c ENSDARG00000038577 16845 1.608 0.906 - - - - - 0.702 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
47. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 1.6 - - - - - 0.724 0.876 - - mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
48. stac3 ENSDARG00000098883 1765 1.585 - - - - - 0.747 0.838 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
49. ap2s1 ENSDARG00000026967 18613 1.585 0.874 0.711 - - - - - - - adaptor related protein complex 2 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2174]
50. hypk ENSDARG00000059725 20584 1.582 0.877 - - - - - 0.705 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
51. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.58 - - - - - 0.797 0.783 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
52. col8a1a ENSDARG00000077403, ENSDARG00000111174 11125 1.579 0.772 0.807 - - - - - - - collagen, type VIII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070912-274]
53. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 1.573 - 0.842 - - - - 0.731 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
54. txlnbb ENSDARG00000076241 6396 1.572 - - - 0.849 - - 0.723 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
55. smtnl1 ENSDARG00000041257 7410 1.562 - - - - - 0.721 0.841 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
56. ube2a ENSDARG00000098466 12765 1.558 0.854 - - - - - 0.704 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
57. mcm4 ENSDARG00000040041 7971 1.531 - - - 0.829 - - - - 0.702 minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
58. si:ch211-113e8.9 ENSDARG00000095065 33 1.527 - - - - - 0.759 0.768 - - si:ch211-113e8.9 [Source:ZFIN;Acc:ZDB-GENE-090313-14]
59. MYOT ENSDARG00000076312 1791 1.525 - - - - - 0.769 0.756 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
60. xirp2b ENSDARG00000091090 759 1.523 - - - - - 0.781 0.742 - - xin actin binding repeat containing 2b [Source:ZFIN;Acc:ZDB-GENE-030521-26]
61. myhc4 ENSDARG00000035438 1322 1.503 - - - - - 0.729 0.774 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
62. eif2s1b ENSDARG00000052178 11961 1.501 - 0.744 - - - - 0.757 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
63. jph1a ENSDARG00000058603 2852 1.498 - - - - - 0.704 0.794 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
64. CABZ01041002.1 CABZ01041002.1 957 1.496 - - - - - 0.718 0.778 - -
65. zgc:174895 ENSDARG00000079416, ENSDARG00000113559 451 1.488 - - - - - 0.733 0.755 - - zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]
66. rps18 ENSDARG00000100392 64615 1.488 0.740 - - - - - 0.748 - - ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
67. ryr3 ENSDARG00000071331 6795 1.479 - - - - - 0.725 0.754 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
68. PTGES3L PTGES3L 4801 1.475 - 0.715 - - - - 0.760 - -
69. zgc:193541 ENSDARG00000092873 21276 1.465 - - - 0.727 - - 0.738 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
70. NOG NOG 324 1.457 - - - - - 0.709 0.748 - -
71. eng1a eng1a 484 1.454 - - - - - 0.714 0.740 - -
72. COMP 2018 0.991 - 0.991 - - - - - - - cartilage oligomeric matrix protein, transcript variant X1
73. helz ENSDARG00000030560 3259 0.991 - 0.991 - - - - - - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
74. ndufv3 ENSDARG00000090389 4829 0.99 - 0.990 - - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
75. rpl7l1 ENSDARG00000042864 3256 0.989 - 0.989 - - - - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
76. snoU83B snoU83B 4666 0.989 - 0.989 - - - - - - -
77. alas1 ENSDARG00000021059 4892 0.989 0.989 - - - - - - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
78. hadh ENSDARG00000030765 3406 0.989 0.989 - - - - - - - - hydroxyacyl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040801-261]
79. rock1 ENSDARG00000058993 2603 0.988 - 0.988 - - - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100712-2]
80. C17H14orf166 C17H14orf166 1553 0.988 0.988 - - - - - - - -
81. C9H2orf15 C9H2orf15 1975 0.988 - 0.988 - - - - - - -
82. eif2a ENSDARG00000101061 3800 0.988 0.988 - - - - - - - - eukaryotic translation initiation factor 2A [Source:ZFIN;Acc:ZDB-GENE-050626-52]
83. rhoj ENSDARG00000020250 1522 0.988 - 0.988 - - - - - - - ras homolog family member J [Source:ZFIN;Acc:ZDB-GENE-040724-272]
84. bves ENSDARG00000058548 2291 0.987 - 0.987 - - - - - - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
85. MAP4K4 ENSDARG00000098670 4665 0.986 - 0.986 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
86. hccs hccs 1758 0.986 - 0.986 - - - - - - -
87. fzr1 fzr1 2984 0.986 - - - 0.986 - - - - -
88. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 0.985 - 0.985 - - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
89. bmpr2a ENSDARG00000011941 2972 0.985 - - - 0.985 - - - - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
90. tiprl ENSDARG00000032353 1045 0.985 - 0.985 - - - - - - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
91. snx16 ENSDARG00000046072 931 0.984 - 0.984 - - - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
92. glsb ENSDARG00000040705 1439 0.984 - 0.984 - - - - - - - glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
93. hoxc10a ENSDARG00000070348 2323 0.984 - 0.984 - - - - - - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
94. mrps26 ENSDARG00000039719, ENSDARG00000117175 1514 0.984 - 0.984 - - - - - - - mitochondrial ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-040718-115]
95. ptpn13 ENSDARG00000103699 2866 0.984 - 0.984 - - - - - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
96. slc1a4 ENSDARG00000000551 4298 0.984 - 0.984 - - - - - - - solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-030616-566]
97. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 0.984 - 0.984 - - - - - - - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
98. rb1 ENSDARG00000006782 1445 0.984 - - - 0.984 - - - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
99. fam102bb ENSDARG00000002333 1483 0.983 - - - 0.983 - - - - - family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
100. sf3b4 ENSDARG00000018574 7470 0.983 0.983 - - - - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]

There are 1205 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA