Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cux2a

Gene Name Gene ID Reads Annotation
cux2a 493 cut-like homeobox 2a










Genes with expression patterns similar to cux2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cux2a 493 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cut-like homeobox 2a
2. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 2.244 0.730 0.747 - - - 0.767 - - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
3. zgc:162612 ENSDARG00000079699 244 1.907 - 0.923 - - - - 0.984 - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
4. mapta ENSDARG00000089314 2038 1.892 0.934 - - - - - 0.958 - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
5. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.785 0.810 - - - - - 0.975 - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
6. ncapg2 ENSDARG00000060023 993 1.732 - - - - - 0.743 0.989 - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
7. rpz5 ENSDARG00000075718 1703 1.729 - - - 0.780 - - 0.949 - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
8. armc1l ENSDARG00000020887 1219 1.725 0.738 - - - - - 0.987 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
9. AGO1 ENSDARG00000092644 4521 1.721 0.926 - - - - 0.795 - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
10. plcxd3 ENSDARG00000054794 112 1.709 0.831 - - - - 0.878 - - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-10]
11. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.701 - - - 0.719 - - 0.982 - -
12. hoxa5a ENSDARG00000102501 1667 1.697 0.914 - - - - 0.783 - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
13. slc8a2b ENSDARG00000100592 598 1.692 0.958 - - - - 0.734 - - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
14. tyms ENSDARG00000042894 3068 1.69 0.718 - - - - - 0.972 - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
15. TMEM184B TMEM184B 1280 1.686 - - - - - - 0.985 0.701 -
16. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.684 - - - 0.771 - - 0.913 - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
17. UBE2QL1 ENSDARG00000079276 3474 1.68 0.908 - - - - 0.772 - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
18. neurog1 ENSDARG00000056130 3924 1.679 0.945 - - - - 0.734 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
19. bora ENSDARG00000042688, ENSDARG00000112916 402 1.673 0.908 - - 0.765 - - - - - bora, aurora kinase A activator [Source:ZFIN;Acc:ZDB-GENE-041114-165]
20. timm23 timm23 2712 1.672 - - - 0.703 - - 0.969 - -
21. TUBB8P7_2 TUBB8P7_2 565 1.669 0.955 - - - - 0.714 - - -
22. VPS37B_1 VPS37B_1 1816 1.665 - - - 0.702 - - 0.963 - -
23. sox19b ENSDARG00000040266 532 1.664 0.882 - - - - 0.782 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
24. C8H1orf106 C8H1orf106 2690 1.662 0.936 - - - - 0.726 - - -
25. hoxc3a ENSDARG00000070339 3379 1.661 0.743 - - - - - 0.918 - - homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
26. acbd3 ENSDARG00000042623 2643 1.66 - - - 0.728 - - 0.932 - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
27. syt11b ENSDARG00000056105 578 1.658 0.881 - - - - 0.777 - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
28. bhlhe22 ENSDARG00000058039 1673 1.656 0.938 - - - - 0.718 - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
29. prkcda ENSDARG00000009208 1508 1.654 - - - 0.752 - - 0.902 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
30. map7d2a ENSDARG00000068480 513 1.646 0.878 - - - - 0.768 - - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
31. nova2 ENSDARG00000017673 7685 1.646 0.925 - - - - 0.721 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
32. cacng2b ENSDARG00000102376 213 1.638 0.923 - - - - 0.715 - - - calcium channel, voltage-dependent, gamma subunit 2b [Source:ZFIN;Acc:ZDB-GENE-090624-3]
33. rheb ENSDARG00000090213 1432 1.63 0.883 - - - - 0.747 - - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
34. clstn1 ENSDARG00000031720 5286 1.627 0.899 - - - - 0.728 - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
35. PARP6 PARP6 119 1.626 0.861 - - - - 0.765 - - -
36. ptprnb ENSDARG00000077047 2743 1.621 0.886 - - - - 0.735 - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
37. EPB41L1 EPB41L1 1896 1.619 0.897 - - - - 0.722 - - -
38. SPOCK1 ENSDARG00000074644 794 1.616 0.908 - - - - 0.708 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
39. jmjd4 ENSDARG00000058995 199 1.612 - 0.859 - - - 0.753 - - - jumonji domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-636]
40. nefmb ENSDARG00000043697 2052 1.61 0.890 - - - - 0.720 - - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
41. tmem59l ENSDARG00000003655 1536 1.609 0.883 - - - - 0.726 - - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
42. sept5a ENSDARG00000013843 1206 1.606 0.850 - - - - 0.756 - - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
43. vamp2 ENSDARG00000056877 2158 1.604 0.900 - - - - 0.704 - - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
44. kcnc3a ENSDARG00000055855 1821 1.604 0.899 0.705 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
45. CR407704.1 CR407704.1 188 1.601 0.840 - - - - 0.761 - - -
46. her4.3 ENSDARG00000070770 613 1.592 0.808 - - - - 0.784 - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
47. C11H19orf25 C11H19orf25 491 1.592 - 0.866 - 0.726 - - - - -
48. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.591 0.813 - - - - 0.778 - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
49. inab ENSDARG00000053248 3239 1.591 0.889 - - - - 0.702 - - - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
50. si:dkey-169l5.3 si:dkey-169l5.3 239 1.59 0.858 - - - - 0.732 - - -
51. enpp5 ENSDARG00000070625 550 1.588 0.836 - - - - 0.752 - - - ectonucleotide pyrophosphatase/phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-041014-10]
52. aptx ENSDARG00000027143 87 1.582 - 0.843 - - - - - 0.739 - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
53. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.573 0.751 - - - - 0.822 - - - homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
54. dnajc5aa ENSDARG00000042948 2885 1.573 0.847 - - - - 0.726 - - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
55. gng3 ENSDARG00000009553 2530 1.571 0.865 - - - - 0.706 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
56. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.567 0.754 - - - - - 0.813 - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
57. ENDOD1_5 ENDOD1_5 8723 1.567 0.843 - - - - 0.724 - - -
58. mapk11 ENSDARG00000045836 846 1.566 0.801 - - - - 0.765 - - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
59. SYT2 ENSDARG00000014169 265 1.561 0.816 - - - - 0.745 - - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
60. APBB3 ENSDARG00000053771 654 1.556 0.792 - - - - 0.764 - - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
61. lhfpl4a ENSDARG00000111810 206 1.551 0.832 - - - - 0.719 - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
62. scube2 ENSDARG00000037362 2833 1.548 0.840 - - - - 0.708 - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
63. slc35g2b ENSDARG00000045447 378 1.548 0.807 - - - - 0.741 - - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
64. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.535 0.726 - - - - 0.809 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
65. SPTBN4_1 ENSDARG00000092624 473 1.529 - - - 0.707 - 0.822 - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
66. sgca ENSDARG00000074156 2418 1.528 - 0.806 - - - - 0.722 - - sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]
67. rufy3 ENSDARG00000029692 3031 1.523 0.816 - - - - 0.707 - - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
68. GADD45G GADD45G 382 1.521 0.775 - - - - 0.746 - - -
69. tuba8l3 ENSDARG00000070155 7525 1.52 0.782 - - - - - 0.738 - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
70. hnrnpa3 ENSDARG00000059351 453 1.52 0.798 - - - - 0.722 - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
71. cadpsb ENSDARG00000070567 458 1.517 0.774 - - - - 0.743 - - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
72. CABZ01051991.1 CABZ01051991.1 346 1.517 0.816 - - 0.701 - - - - -
73. gabrg2 ENSDARG00000053665 434 1.515 0.796 - - - - 0.719 - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
74. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.513 0.778 - - - - 0.735 - - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
75. TTF1_5 TTF1_5 705 1.508 - 0.784 - 0.724 - - - - -
76. hoxa9b ENSDARG00000056819 3081 1.508 0.781 - - - - 0.727 - - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
77. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.5 0.797 - - - - 0.703 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
78. nrxn2b ENSDARG00000063150 343 1.5 0.720 - - - - 0.780 - - - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
79. C19H7orf41 C19H7orf41 2243 1.5 0.785 - - 0.715 - - - - -
80. clstn3 ENSDARG00000073883 590 1.498 0.773 - - - - 0.725 - - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
81. prdm8 ENSDARG00000025017 370 1.498 0.745 - - - - 0.753 - - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
82. pcnxl2 610 1.496 - 0.792 - - - 0.704 - - - pecanex-like 2 (Drosophila), transcript variant X2
83. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.493 0.786 - - - - 0.707 - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
84. dync1i1 ENSDARG00000060948 554 1.477 0.761 - - - - 0.716 - - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
85. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1.474 0.752 - - 0.722 - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
86. fam49a ENSDARG00000006672 939 1.473 - - - 0.716 - 0.757 - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
87. chd7 ENSDARG00000075211 12085 1.469 0.744 - - - - 0.725 - - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
88. syngr3a ENSDARG00000014871 405 1.469 0.768 - - 0.701 - - - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
89. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 1.468 - 0.760 - - - 0.708 - - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
90. CABZ01028287.1 CABZ01028287.1 626 1.466 0.731 - - - - 0.735 - - -
91. cep72 ENSDARG00000105258 344 1.464 - 0.714 - - - 0.750 - - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
92. lmo1 ENSDARG00000034504 260 1.463 - - - 0.713 - 0.750 - - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
93. kcnd1 ENSDARG00000074746 153 1.459 0.736 - - - - 0.723 - - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
94. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1.454 0.751 0.703 - - - - - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
95. notch3 ENSDARG00000052139 15033 1.439 0.704 - - - - - 0.735 - - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
96. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.438 0.708 - - - - 0.730 - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
97. wnt4a ENSDARG00000071208 1157 1.436 0.724 - - - - 0.712 - - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
98. ftr65 202 1.435 - 0.714 - 0.721 - - - - - finTRIM family, member 65
99. AP5B1 ENSDARG00000078805 62 1.432 - 0.718 - - - 0.714 - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
100. nell2b ENSDARG00000062797 854 1.43 0.703 - - - - 0.727 - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]

There are 1568 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA