Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cux1a

Gene Name Gene ID Reads Annotation
cux1a ENSDARG00000078459 3914 cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]










Genes with expression patterns similar to cux1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cux1a ENSDARG00000078459 3914 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
2. atf4b2 atf4b2 4734 2.518 - - 0.927 - - - 0.826 - 0.765
3. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.468 - 0.973 - - - - 0.754 - 0.741 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
4. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.445 - - - - - 0.893 0.789 - 0.763 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
5. ing2 ENSDARG00000104907 1336 1.977 - 0.993 - - - 0.984 - - - inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
6. psmc2 ENSDARG00000020101 8095 1.935 - 0.955 - - - 0.980 - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
7. mgst2 ENSDARG00000071345 5626 1.93 - 0.985 - - - 0.945 - - - microsomal glutathione S-transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060616-94]
8. rbb4 rbb4 15541 1.788 - 0.981 - - - - - - 0.807
9. dhx15 ENSDARG00000015392 7496 1.787 - 0.993 - - - - - - 0.794 DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
10. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.77 - - - 0.786 - 0.984 - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
11. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.764 - 0.993 - - - - 0.771 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
12. stmn1a ENSDARG00000004169 21169 1.744 - - - - - 0.966 0.778 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
13. PLEKHG4 ENSDARG00000075964 2860 1.734 - 0.992 - - - - 0.742 - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
14. MKI67 ENSDARG00000091150 11038 1.72 - 0.862 - - - - 0.858 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
15. rnf7 ENSDARG00000055524 3390 1.717 - - - - - 0.979 0.738 - - ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
16. dnajc5ab ENSDARG00000004836 2923 1.716 - - - - - 0.989 - 0.727 - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
17. tuba1c ENSDARG00000055216 8384 1.713 - 0.993 - - - - - - 0.720 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
18. mau2 ENSDARG00000042056 2378 1.706 - - - - - 0.975 - - 0.731 MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
19. disp1 ENSDARG00000044417 603 1.705 0.721 - - - - 0.984 - - - dispatched homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030911-7]
20. kdm1a ENSDARG00000060679 6152 1.703 - - - - - 0.991 0.712 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
21. nsa2 ENSDARG00000007708 6329 1.702 - 0.996 - - - - - - 0.706 NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
22. irs2 irs2 392 1.694 - - - - - 0.982 0.712 - -
23. llgl1 ENSDARG00000009693 4205 1.694 - - - - - 0.980 0.714 - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
24. foxq1b ENSDARG00000055395 549 1.692 - - - - - 0.979 - 0.713 - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
25. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.691 - - - - - 0.966 0.725 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
26. cacybp ENSDARG00000014731 2650 1.688 - - - 0.701 - 0.987 - - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
27. txnl4a ENSDARG00000036190 2048 1.688 - - - - - 0.984 0.704 - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
28. sulf2l sulf2l 4980 1.681 - - - - - 0.973 0.708 - -
29. PHYHIP ENSDARG00000116497 456 1.681 - - - - - 0.981 0.700 - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
30. pom121 ENSDARG00000055113 1063 1.661 - - - 0.800 - - - 0.861 - POM121 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-6557]
31. sf3b14 sf3b14 9434 1.658 - - - - - 0.894 - - 0.764
32. wu:fk48d07 wu:fk48d07 13245 1.647 - - - - - 0.924 - - 0.723
33. ddx39ab ENSDARG00000015111 11619 1.635 - - - - - - 0.780 - 0.855 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
34. srsf3b ENSDARG00000059360 14888 1.627 - 0.876 - - - - - - 0.751 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
35. sema6a ENSDARG00000102165 1401 1.624 - - - - - - - 0.873 0.751 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
36. cpsf5 cpsf5 1841 1.617 - - - - - - 0.814 0.803 -
37. znf865 ENSDARG00000036698 15532 1.616 - - - - - - 0.759 - 0.857 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
38. rtca ENSDARG00000002215 3558 1.598 - - - - - - 0.842 - 0.756 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
39. hnrnpub ENSDARG00000004735 16496 1.587 - - - - - - 0.758 - 0.829 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
40. rpl38 ENSDARG00000006413 59590 1.566 - 0.793 - - - 0.773 - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
41. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.554 - - - - - - 0.830 0.724 - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
42. smarcd1 ENSDARG00000019004 6028 1.542 - - - - - - 0.775 - 0.767 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
43. HNRNPAB HNRNPAB 22267 1.539 - - - - - - 0.763 - 0.776
44. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.532 - 0.823 - - - - - - 0.709 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
45. smarcc1a ENSDARG00000017397 2957 1.522 - - - - - - - 0.710 0.812 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
46. si:dkey-251i10.2 ENSDARG00000093957 4424 1.521 - - - - - 0.818 0.703 - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
47. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.51 - - - 0.785 - - 0.725 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
48. zswim5 ENSDARG00000055900 4243 1.509 - - - - - - 0.754 - 0.755 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
49. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.508 0.707 - - - - - - - 0.801 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
50. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.506 - - - - - - 0.748 - 0.758 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
51. map1aa ENSDARG00000059601 599 1.503 - - - - - - 0.731 0.772 - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
52. nxf1 ENSDARG00000055076 3251 1.496 - - - 0.773 - - - - 0.723 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
53. mcm4 ENSDARG00000040041 7971 1.489 - - - - - - 0.762 - 0.727 minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
54. snrpc ENSDARG00000009871 9567 1.47 - - - - - - 0.733 - 0.737 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
55. acvr1b acvr1b 2963 1.46 - - - - - - 0.755 - 0.705
56. KIF4A KIF4A 3322 1.458 - - - - - - 0.719 - 0.739
57. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.454 - - - - - - 0.753 - 0.701 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
58. fzd3a ENSDARG00000021664 1958 1.452 - - - - - - 0.737 - 0.715 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
59. cdk6 ENSDARG00000070228 1778 1.45 - - - - - - 0.729 - 0.721 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
60. hyou1 ENSDARG00000013670 4172 1.443 - - - - - - 0.712 - 0.731 hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
61. tgif1 ENSDARG00000059337 4020 1.437 - - - - - - 0.716 - 0.721 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
62. SCML2 ENSDARG00000012949 1310 1.434 - - - - - - 0.730 - 0.704 Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
63. wu:fb17g07 wu:fb17g07 10567 1.431 - - - - - - 0.723 - 0.708
64. nrarpb ENSDARG00000018958 6225 1.422 - - - - - - 0.709 - 0.713 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
65. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.418 - - - 0.709 - - - - 0.709 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
66. syt12 ENSDARG00000101776 215 1.416 - - - - - - 0.708 0.708 - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
67. sgut1 3470 0.996 - 0.996 - - - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
68. snrpa1 ENSDARG00000024651 3306 0.996 - 0.996 - - - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
69. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 0.996 - 0.996 - - - - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
70. cstf3 ENSDARG00000018904 6111 0.995 - 0.995 - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
71. samd1a ENSDARG00000102810 1037 0.994 - 0.994 - - - - - - - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
72. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.994 - 0.994 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
73. cep44 ENSDARG00000053106 683 0.994 - 0.994 - - - - - - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
74. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 0.994 - 0.994 - - - - - - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
75. dnajc3 dnajc3 802 0.994 - 0.994 - - - - - - -
76. sh3bp4a ENSDARG00000020000 1049 0.994 - 0.994 - - - - - - - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
77. foxo1b ENSDARG00000061549 790 0.994 - 0.994 - - - - - - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]
78. FP102892.2 FP102892.2 809 0.993 - 0.993 - - - - - - -
79. tmem209 ENSDARG00000039340 1598 0.993 - 0.993 - - - - - - - transmembrane protein 209 [Source:ZFIN;Acc:ZDB-GENE-030131-2879]
80. tdh ENSDARG00000002745 5344 0.993 - 0.993 - - - - - - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
81. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 0.993 - 0.993 - - - - - - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
82. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 0.993 - 0.993 - - - - - - - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
83. pdxkb ENSDARG00000036546 721 0.993 - 0.993 - - - - - - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
84. CR387996.1 ENSDARG00000097774 3037 0.993 - 0.993 - - - - - - -
85. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.993 - 0.993 - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
86. usp9 ENSDARG00000013708 9057 0.993 - 0.993 - - - - - - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
87. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 0.993 - 0.993 - - - - - - - akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
88. cped1 ENSDARG00000045747 1024 0.993 - 0.993 - - - - - - - cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
89. ror2 ENSDARG00000076227, ENSDARG00000116710 1498 0.993 - 0.993 - - - - - - - receptor tyrosine kinase-like orphan receptor 2 [Source:ZFIN;Acc:ZDB-GENE-060427-5]
90. mao ENSDARG00000023712 1448 0.993 - 0.993 - - - - - - - monoamine oxidase [Source:ZFIN;Acc:ZDB-GENE-040329-3]
91. rpl3 ENSDARG00000003599 797 0.993 - 0.993 - - - - - - - ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291]
92. LIMA1 LIMA1 908 0.993 - 0.993 - - - - - - -
93. mcfd2 ENSDARG00000039757, ENSDARG00000109631, ENSDARG00000116502 1804 0.993 - 0.993 - - - - - - - multiple coagulation factor deficiency 2 [Source:ZFIN;Acc:ZDB-GENE-041010-8]
94. utp23 ENSDARG00000105012 1346 0.993 - 0.993 - - - - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
95. abl1 ENSDARG00000035187 3553 0.993 - 0.993 - - - - - - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
96. slc38a10 ENSDARG00000077081 1691 0.993 - 0.993 - - - - - - - solute carrier family 38, member 10 [Source:ZFIN;Acc:ZDB-GENE-050309-21]
97. socs6b ENSDARG00000015863 1799 0.993 - 0.993 - - - - - - - suppressor of cytokine signaling 6b [Source:ZFIN;Acc:ZDB-GENE-030131-1670]
98. KLB ENSDARG00000076294 595 0.992 - 0.992 - - - - - - - klotho beta [Source:ZFIN;Acc:ZDB-GENE-110909-4]
99. srsf5b ENSDARG00000027734 6996 0.992 - 0.992 - - - - - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
100. C20H12orf57 C20H12orf57 3325 0.992 - 0.992 - - - - - - -

There are 1173 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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