Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cul5a

Gene Name Gene ID Reads Annotation
cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]










Genes with expression patterns similar to cul5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
2. plcg1 ENSDARG00000038442 5324 2.588 - 0.833 0.888 - - - - 0.867 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
3. znrd1 ENSDARG00000036070 684 2.519 - 0.900 - - - - 0.767 0.852 - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
4. mdm4 ENSDARG00000057513 1954 2.36 - 0.788 0.840 - - - - 0.732 - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
5. bub1bb ENSDARG00000074927 1667 2.36 - 0.736 0.859 - - - - 0.765 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
6. lhfp 700 1.825 - 0.909 0.916 - - - - - - lipoma HMGIC fusion partner
7. CR942805.1 CR942805.1 94 1.813 - - 0.928 - - - - 0.885 -
8. CABZ01073174.1 CABZ01073174.1 581 1.811 - - 0.911 - - - - 0.900 -
9. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 1.777 - 0.867 0.910 - - - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
10. pop5 ENSDARG00000053452 1347 1.772 - 0.898 - - - - - 0.874 - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
11. pelo ENSDARG00000055477 1927 1.753 - - 0.909 - - - - 0.844 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
12. rnd3b ENSDARG00000007396 881 1.751 - 0.865 0.886 - - - - - - Rho family GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-040718-331]
13. ARHGEF17 ENSDARG00000101644 625 1.749 - 0.821 0.928 - - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
14. klf15 ENSDARG00000091127 1037 1.747 - 0.881 0.866 - - - - - - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
15. zgc:136439 ENSDARG00000009267 720 1.746 - - 0.879 - - - - 0.867 - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
16. ap1s1 ENSDARG00000056803 3854 1.74 - - 0.919 - - - - 0.821 - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
17. ZNF628 1104 1.737 - 0.885 - - - - - 0.852 - zinc finger protein 628, transcript variant X3
18. lrrfip2 ENSDARG00000010400 2633 1.726 - 0.866 0.860 - - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
19. fat3a ENSDARG00000033840 902 1.71 - - 0.876 - - - - 0.834 - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
20. endog ENSDARG00000058865 679 1.703 - 0.888 - - - - 0.815 - - endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
21. chsy3 ENSDARG00000069472 271 1.703 - 0.843 - - - - - 0.860 - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
22. rb1 ENSDARG00000006782 1445 1.7 - 0.868 - - - - - 0.832 - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
23. mmp14a ENSDARG00000002235 911 1.7 - - 0.867 - - - 0.833 - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
24. lyrm1 ENSDARG00000026281 303 1.694 - 0.906 - - - - 0.788 - - LYR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-210]
25. map3k7 ENSDARG00000020469 2845 1.68 - 0.812 0.868 - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
26. mrps25 ENSDARG00000041306 3654 1.679 - 0.822 0.857 - - - - - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
27. smim7 ENSDARG00000074848 1260 1.673 - 0.814 0.859 - - - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
28. NTAN1 ENSDARG00000105182 844 1.666 - 0.925 - 0.741 - - - - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
29. C16H8orf76 C16H8orf76 329 1.664 - - - 0.775 - - - 0.889 -
30. PVRL4 1691 1.661 - - 0.868 - - - - 0.793 - poliovirus receptor-related 4
31. slc35b1_1 ENSDARG00000038213 194 1.661 - - - 0.756 - - - 0.905 - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
32. MRPL52 ENSDARG00000090568 4402 1.658 - - 0.830 - - - - 0.828 - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
33. kif23 ENSDARG00000014943, ENSDARG00000116561 845 1.645 - 0.843 - - - 0.802 - - - kinesin family member 23 [Source:ZFIN;Acc:ZDB-GENE-991019-4]
34. crkl ENSDARG00000028699 2966 1.643 - 0.841 - - - - - 0.802 - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
35. bcs1l ENSDARG00000012295 664 1.642 - 0.900 - - - - 0.742 - - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
36. zic5 ENSDARG00000016022 1034 1.64 - 0.823 - - - - - 0.817 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
37. GID4 ENSDARG00000079482 1375 1.634 - 0.770 0.864 - - - - - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
38. parp16 ENSDARG00000018593 873 1.624 - - 0.916 - - - 0.708 - - poly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
39. wif1 ENSDARG00000005541 1689 1.62 - 0.908 0.712 - - - - - - wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
40. CR388231.3 ENSDARG00000105601 2404 1.619 - - 0.809 - - - - 0.810 -
41. si:ch211-149b19.3 ENSDARG00000076011 306 1.616 - 0.849 - - - - 0.767 - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]
42. zgc:66475 ENSDARG00000099519 1348 1.614 - - 0.809 - - - - 0.805 - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
43. cables1 ENSDARG00000099395 361 1.611 - - 0.885 - - - 0.726 - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
44. CABZ01083862.1 ENSDARG00000106989 779 1.611 - - 0.858 0.753 - - - - - zinc finger protein 821 [Source:NCBI gene;Acc:571740]
45. dnajc7_1 ENSDARG00000058148 687 1.61 - - - - - - 0.734 0.876 - DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2483]
46. dock7 ENSDARG00000078675 1995 1.604 - 0.811 - - - - 0.793 - - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
47. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 1.602 - - 0.887 - - - - 0.715 - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
48. prdm10 ENSDARG00000104251 510 1.597 - 0.880 - 0.717 - - - - - PR domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050419-74]
49. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.593 - - 0.872 - - - - 0.721 - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
50. phip ENSDARG00000015970 1080 1.589 0.736 0.853 - - - - - - - pleckstrin homology domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-261]
51. fbxl2 ENSDARG00000012135 577 1.586 0.712 - - - - - - 0.874 - F-box and leucine-rich repeat protein 2 [Source:ZFIN;Acc:ZDB-GENE-030925-12]
52. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.583 - 0.746 0.837 - - - - - - LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
53. mpv17l2 ENSDARG00000056367, ENSDARG00000112107 352 1.582 - 0.811 - 0.771 - - - - - MPV17 mitochondrial membrane protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-306]
54. LLPH ENSDARG00000055360 1456 1.58 - 0.849 - - - - - 0.731 - LLP homolog, long-term synaptic facilitation factor [Source:ZFIN;Acc:ZDB-GENE-051030-30]
55. wdr46 ENSDARG00000095879 374 1.58 - - 0.820 0.760 - - - - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
56. IWS1 2428 1.579 - - 0.866 - - - - 0.713 - IWS1, SUPT6H interacting protein, transcript variant X2
57. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.571 - - 0.859 0.712 - - - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
58. asmtl ENSDARG00000021433, ENSDARG00000114151 550 1.567 - 0.866 - - - - - - 0.701 acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
59. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.563 - - 0.862 - - 0.701 - - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
60. pogza ENSDARG00000054778 1495 1.562 - - - - - - 0.701 0.861 - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
61. foxj1a ENSDARG00000101919 1095 1.56 - - 0.788 - - - - 0.772 - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
62. eprs ENSDARG00000060494 4729 1.56 - 0.789 - - - - - 0.771 - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
63. psmb2 ENSDARG00000031511 4016 1.551 - 0.773 - - - 0.778 - - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
64. CLDN23 CLDN23 2002 1.551 - 0.748 0.803 - - - - - -
65. rnd3a ENSDARG00000076799 4705 1.535 - - 0.763 - - - - 0.772 - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
66. xrn1 ENSDARG00000091652 2864 1.534 - - 0.780 - - - 0.754 - - 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
67. ATAD2 ENSDARG00000076590 411 1.532 - - - 0.725 - - - 0.807 - ATPase family, AAA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7003]
68. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.529 - 0.822 - - - - - 0.707 - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
69. ndufa5 ENSDARG00000039346 2617 1.522 - - - - - - 0.767 0.755 - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
70. prc1b ENSDARG00000005993 780 1.521 - 0.789 - - - - - 0.732 - protein regulator of cytokinesis 1b [Source:ZFIN;Acc:ZDB-GENE-040426-777]
71. CU462878.1 ENSDARG00000090072 352 1.519 - - - 0.729 - - - 0.790 - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
72. styk1 1199 1.498 - - 0.748 - - - - - 0.750 serine/threonine/tyrosine kinase 1
73. c1galt1b ENSDARG00000055561, ENSDARG00000113870 1795 1.493 - 0.702 - 0.791 - - - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9075]
74. slc35b4 ENSDARG00000071087 1030 1.491 - - - - - - 0.772 0.719 - solute carrier family 35, member B4 [Source:ZFIN;Acc:ZDB-GENE-030131-2457]
75. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.485 - - - - - - 0.749 0.736 - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
76. fam129ba ENSDARG00000062970 1578 1.48 - 0.727 - - - - - 0.753 - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
77. synpo2lb ENSDARG00000078696 2361 1.477 - 0.747 0.730 - - - - - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
78. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.456 - 0.730 - - - 0.726 - - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
79. aurkaip1 ENSDARG00000074985 2214 1.452 - 0.706 0.746 - - - - - - aurora kinase A interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-24]
80. sra1 ENSDARG00000053619 2799 1.442 - 0.716 0.726 - - - - - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
81. ZNF281 ZNF281 1946 0.953 - 0.953 - - - - - - -
82. CAMTA2 ENSDARG00000092799 1950 0.952 - - 0.952 - - - - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
83. mark3 mark3 1375 0.947 - 0.947 - - - - - - -
84. hint2 ENSDARG00000100938 1053 0.947 - 0.947 - - - - - - - histidine triad nucleotide binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070410-139]
85. ATF6B 960 0.944 - - 0.944 - - - - - - activating transcription factor 6 beta
86. CCDC167 ENSDARG00000045850 1024 0.941 - - 0.941 - - - - - - coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
87. CAMSAP2 CAMSAP2 109 0.939 - - 0.939 - - - - - -
88. rnf114 ENSDARG00000009886 725 0.938 - - 0.938 - - - - - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
89. gtf2h5 ENSDARG00000056099, ENSDARG00000114297 1331 0.937 - 0.937 - - - - - - - general transcription factor IIH, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-041001-144]
90. twist2 ENSDARG00000078266 499 0.936 - - 0.936 - - - - - - twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235]
91. CAPN1 ENSDARG00000055338 683 0.935 - - 0.935 - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
92. ndst2b ENSDARG00000060678 453 0.933 - - 0.933 - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
93. DACT3 DACT3 766 0.932 - - 0.932 - - - - - -
94. FBLN1 ENSDARG00000103311 877 0.931 - - 0.931 - - - - - - fibulin 1 [Source:NCBI gene;Acc:30240]
95. inpp4b ENSDARG00000075201 267 0.931 - - 0.931 - - - - - - inositol polyphosphate-4-phosphatase type II B [Source:ZFIN;Acc:ZDB-GENE-090312-97]
96. CU571255.1 CU571255.1 902 0.931 - - 0.931 - - - - - -
97. Metazoa_SRP_8 Metazoa_SRP_8 153 0.931 - - 0.931 - - - - - -
98. C11H9orf89 C11H9orf89 477 0.93 - 0.930 - - - - - - -
99. wdr66 ENSDARG00000059855 276 0.929 - - 0.929 - - - - - - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
100. hsd17b14 ENSDARG00000054842 1394 0.929 - - 0.929 - - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]

There are 1504 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA