Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cul4b

Gene Name Gene ID Reads Annotation
cul4b ENSDARG00000060510 6053 cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]










Genes with expression patterns similar to cul4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cul4b ENSDARG00000060510 6053 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
2. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 3.218 - - - 0.987 0.800 - - 0.705 0.726 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
3. kdm5c ENSDARG00000006124 4389 3.155 - - - - 0.833 0.743 0.707 - 0.872 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
4. SERBP1 SERBP1 9276 2.589 - - - 0.994 - 0.736 0.859 - -
5. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 2.535 - 0.972 - - 0.859 0.704 - - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
6. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 2.417 - 0.974 - - - 0.725 0.718 - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
7. PELP1 ENSDARG00000079313 5771 2.394 - 0.955 - - 0.715 - 0.724 - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
8. setdb1b ENSDARG00000099021 2937 2.37 - - - - - 0.780 0.724 - 0.866 SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
9. smarcd1 ENSDARG00000019004 6028 2.35 - - - - - 0.788 0.736 - 0.826 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
10. vps35 ENSDARG00000008224 13245 2.332 - 0.840 - - - 0.741 0.751 - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
11. arid2 ENSDARG00000007413 4413 2.329 - - - - 0.798 0.757 0.774 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
12. dusp1 ENSDARG00000100515 2338 2.326 - - - - - 0.752 0.733 - 0.841 dual specificity phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2018]
13. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 2.282 - - 0.704 - 0.800 - 0.778 - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
14. hmgb3a ENSDARG00000056725 15668 2.258 - - - - - - 0.714 0.770 0.774 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
15. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 2.226 0.740 - - - 0.737 - - - 0.749 post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
16. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.213 - - 0.749 - - 0.713 - 0.751 - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
17. lpl ENSDARG00000087697 2578 2.161 - - 0.701 - 0.756 - - 0.704 - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
18. syncripl ENSDARG00000026723 3889 2.158 - - - - 0.721 - 0.723 - 0.714 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
19. ankrd10b ENSDARG00000004771 654 2.14 - - - - - - 0.726 0.712 0.702 ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
20. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 1.969 - 0.977 - 0.992 - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
21. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.968 - - 0.974 0.994 - - - - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
22. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.944 - 0.951 - 0.993 - - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
23. ttc3 ENSDARG00000086075 2157 1.846 - 0.980 - - 0.866 - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
24. MAP4K4 ENSDARG00000098670 4665 1.839 - 0.987 - - - 0.852 - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
25. wasf3 wasf3 3287 1.801 - - 0.972 - 0.829 - - - -
26. bag6 ENSDARG00000075892 3782 1.794 - 0.981 - - 0.813 - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
27. EIF1B ENSDARG00000029445 5034 1.79 - - - 0.993 0.797 - - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
28. si:dkey-22o12.7 si:dkey-22o12.7 1812 1.787 - 0.977 - - 0.810 - - - -
29. DTX4 ENSDARG00000076302 2642 1.786 - - 0.971 - 0.815 - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
30. tomm5 ENSDARG00000068265 11813 1.783 - - - 0.980 0.803 - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
31. herpud2 ENSDARG00000021033 1800 1.783 - - - 0.993 0.790 - - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
32. otub1a ENSDARG00000055536 2892 1.77 - 0.987 - - - - 0.783 - - OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
33. blcap ENSDARG00000052073 8646 1.768 - - - 0.994 - 0.774 - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
34. agrn ENSDARG00000079388, ENSDARG00000110127 5806 1.767 - 0.963 - - - 0.804 - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
35. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.759 - 0.878 - - - 0.881 - - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
36. akirin2 ENSDARG00000058729 13245 1.754 - 0.975 - - - 0.779 - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
37. ptges3b ENSDARG00000089626 5666 1.748 - - - - - - - 0.901 0.847 prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
38. sltm ENSDARG00000052728 6234 1.747 - 0.968 - - - - 0.779 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
39. psma4 ENSDARG00000045928 5112 1.745 - - - - 0.877 0.868 - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
40. rerea ENSDARG00000077353 4162 1.744 - - - 0.990 - 0.754 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
41. CU655970.1 CU655970.1 2123 1.739 - 0.977 - - - 0.762 - - -
42. CR293507.1 ENSDARG00000112572 3198 1.735 - 0.976 - - 0.759 - - - -
43. tet2 ENSDARG00000076928 2190 1.726 - - - - - - - 0.915 0.811 tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
44. znf395a ENSDARG00000060113 3874 1.726 - 0.977 - - - - - 0.749 - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
45. tfap4 ENSDARG00000103923 2203 1.723 - - - - 0.890 - 0.833 - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
46. tchp ENSDARG00000035605 1695 1.722 - - - 0.992 - - - 0.730 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
47. ARHGAP23 ARHGAP23 3946 1.72 - - - 0.994 - 0.726 - - -
48. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.72 - - - - 0.873 - - 0.847 - protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
49. mapk12a ENSDARG00000042021 1573 1.719 - 0.973 - - - 0.746 - - - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
50. C19H1orf85 C19H1orf85 1587 1.719 - 0.978 - - - - 0.741 - -
51. GATAD2B ENSDARG00000005834 3855 1.718 - 0.979 - - - - - 0.739 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
52. wu:fq41a10 wu:fq41a10 7009 1.717 - - - - 0.916 - - 0.801 -
53. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.713 - - - - 0.899 - 0.814 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
54. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.709 - - 0.909 - - - - 0.800 - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
55. sh3glb1 sh3glb1 1335 1.707 - 0.970 - - - 0.737 - - -
56. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.705 - - - 0.993 - - - - 0.712 ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
57. cdc14b ENSDARG00000021483 4958 1.702 - 0.976 - - - 0.726 - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
58. pycr1 pycr1 1258 1.702 - - 0.710 0.992 - - - - -
59. cox5ab ENSDARG00000099663 5689 1.701 - 0.952 - - - - 0.749 - - cytochrome c oxidase subunit 5Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5162]
60. pdia5 ENSDARG00000069242 3576 1.7 - 0.988 - - - - 0.712 - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
61. gng5 ENSDARG00000039830 12102 1.696 - 0.927 - - - - - 0.769 - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
62. tshz1 ENSDARG00000005026 1948 1.693 - - 0.959 - - - 0.734 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
63. ppp6c ENSDARG00000002949 2948 1.692 - - - 0.990 - - 0.702 - - protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]
64. snoU83B snoU83B 4666 1.691 - 0.983 - - 0.708 - - - -
65. gars ENSDARG00000059070 17015 1.689 - 0.914 0.775 - - - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
66. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.688 - 0.938 - - - 0.750 - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
67. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.687 - 0.927 - - - - 0.760 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
68. CABZ01092303.1 CABZ01092303.1 8825 1.686 - - 0.949 - - - 0.737 - -
69. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.682 - 0.961 - - - - 0.721 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
70. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.681 - 0.970 - - - 0.711 - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
71. midn ENSDARG00000018524 7559 1.676 - - 0.936 - - - 0.740 - - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
72. rpl5a ENSDARG00000020197 35209 1.674 - - - 0.943 0.731 - - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
73. nr2f6a ENSDARG00000003607 4779 1.674 - 0.972 - - - - 0.702 - - nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
74. pdcd10b ENSDARG00000012591 3395 1.67 - 0.940 - - - - - - 0.730 programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
75. eef1db ENSDARG00000030053 5185 1.667 - 0.930 - - - - 0.737 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
76. ubqln4 ENSDARG00000052975 6453 1.662 - - - - - 0.808 0.854 - - ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
77. taf9 ENSDARG00000077870 6992 1.661 - 0.929 - - - - 0.732 - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
78. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.646 - - 0.917 - 0.729 - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
79. tpx2 ENSDARG00000078654 8120 1.636 - - 0.840 - - 0.796 - - - TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
80. TNRC6A ENSDARG00000079688 14433 1.634 - - - - - 0.805 0.829 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
81. rbm4.3 ENSDARG00000022129 28571 1.63 - - - 0.926 - 0.704 - - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
82. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.63 - 0.923 0.707 - - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
83. CABZ01080568.2 CABZ01080568.2 2137 1.629 - - - - 0.850 - 0.779 - -
84. prkcbp1l ENSDARG00000011932 2714 1.627 - - - - - 0.808 - - 0.819 protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
85. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.617 - 0.821 - - - - 0.796 - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
86. leo1 ENSDARG00000055357 1644 1.615 - - - - 0.813 0.802 - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
87. chd4b ENSDARG00000025789 14299 1.613 - - 0.717 0.896 - - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
88. dctd ENSDARG00000036990 2168 1.612 - - - - 0.854 - 0.758 - - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
89. ube2t ENSDARG00000063285 716 1.609 - - - - 0.873 - 0.736 - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
90. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 1.606 0.783 - - - 0.823 - - - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
91. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 1.605 - - - - 0.857 - 0.748 - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
92. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.604 - - - - 0.774 - 0.830 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
93. top2a ENSDARG00000024488 4273 1.603 - - - - - 0.806 - 0.797 - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
94. usp44 ENSDARG00000089861 1532 1.597 - - - - 0.870 - 0.727 - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
95. puf60b ENSDARG00000001241 13827 1.596 - - - - - 0.790 - 0.806 - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
96. sin3ab ENSDARG00000059812 2140 1.593 - - - - 0.891 - 0.702 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
97. mcm7 ENSDARG00000101180 12417 1.592 - - 0.844 - - - 0.748 - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
98. ccne2 ENSDARG00000098529 4695 1.592 - - 0.711 - - - - 0.881 - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
99. gmps ENSDARG00000079848 8217 1.589 - 0.821 - - - - - 0.768 - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
100. rpa3 ENSDARG00000002613 2923 1.588 - - - - 0.862 - 0.726 - - replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]

There are 1646 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA