Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ctu1

Gene Name Gene ID Reads Annotation
ctu1 ENSDARG00000020986 135 cytosolic thiouridylase subunit 1 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-704]










Genes with expression patterns similar to ctu1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ctu1 ENSDARG00000020986 135 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cytosolic thiouridylase subunit 1 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-704]
2. si:ch73-70k4.1 ENSDARG00000075915 69 1.811 - 1.000 - - - - - - 0.811 si:ch73-70k4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3788]
3. NPTXR NPTXR 241 1.679 0.792 0.887 - - - - - - -
4. kcnq5a ENSDARG00000069954 492 1.657 - 0.849 - - - - 0.808 - - potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
5. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.611 0.762 - - - - - - - 0.849 ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
6. si:ch211-150j10.4 ENSDARG00000079336 23 1.601 - 0.901 - - - - 0.700 - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
7. arnt ENSDARG00000021855, ENSDARG00000115999 32 1.575 - 0.849 - - - 0.726 - - - aryl hydrocarbon receptor nuclear translocator [Source:ZFIN;Acc:ZDB-GENE-060126-7]
8. si:busm1-163l24.3 31 1.568 - 0.849 - - - - 0.719 - - si:busm1-163l24.3
9. spata5l1 ENSDARG00000061763 127 1.552 0.771 - - - - - - - 0.781 spermatogenesis associated 5-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-204]
10. mgat3 mgat3 195 1.546 0.829 - - - - - - 0.717 -
11. hcn4l ENSDARG00000074419 46 1.534 0.748 0.786 - - - - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
12. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 1.515 - 0.808 - - - - - - 0.707 UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
13. ift57 ENSDARG00000021022 288 1.512 0.716 - - - - - - - 0.796 intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
14. coasy ENSDARG00000042747 336 1.503 - 0.725 - - - - - - 0.778 CoA synthase [Source:ZFIN;Acc:ZDB-GENE-040912-137]
15. ttyh2l ENSDARG00000010727 204 1.483 0.740 - - - 0.743 - - - - tweety homolog 2, like [Source:ZFIN;Acc:ZDB-GENE-040426-2394]
16. polr3h ENSDARG00000102590 209 0.948 - 0.948 - - - - - - - polymerase (RNA) III (DNA directed) polypeptide H [Source:ZFIN;Acc:ZDB-GENE-040718-179]
17. mppe1 ENSDARG00000045416 340 0.938 - 0.938 - - - - - - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
18. vrk2 ENSDARG00000021547 45 0.934 - 0.934 - - - - - - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
19. si:dkey-287i17.3 si:dkey-287i17.3 228 0.925 - 0.925 - - - - - - -
20. trim37 ENSDARG00000076473 115 0.922 - 0.922 - - - - - - - tripartite motif containing 37 [Source:ZFIN;Acc:ZDB-GENE-030131-2957]
21. LAMC2 ENSDARG00000068288 37 0.921 - - - - - 0.921 - - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
22. fip1l1a ENSDARG00000043328 7 0.914 - 0.914 - - - - - - - FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
23. mfsd10 ENSDARG00000086786 304 0.914 - 0.914 - - - - - - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
24. CELF6 ENSDARG00000101933 228 0.914 - 0.914 - - - - - - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
25. flnb ENSDARG00000092281 10 0.914 - 0.914 - - - - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
26. CR450793.1 ENSDARG00000088927 6 0.914 - 0.914 - - - - - - - zinc finger protein 436-like [Source:NCBI gene;Acc:103911751]
27. tmem204 ENSDARG00000045273 42 0.914 - 0.914 - - - - - - - transmembrane protein 204 [Source:ZFIN;Acc:ZDB-GENE-040724-12]
28. psmb5 ENSDARG00000075445, ENSDARG00000111880 126 0.908 - 0.908 - - - - - - - proteasome subunit beta 5 [Source:ZFIN;Acc:ZDB-GENE-990415-215]
29. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 0.904 - 0.904 - - - - - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
30. adh8a ENSDARG00000091211, ENSDARG00000113750 19 0.904 - - - - - 0.904 - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
31. si:ch1073-162e11.2 si:ch1073-162e11.2 5 0.901 - 0.901 - - - - - - -
32. TMEM74B ENSDARG00000078868 45 0.901 - 0.901 - - - - - - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
33. nlgn2b ENSDARG00000079251, ENSDARG00000111576 179 0.901 - 0.901 - - - - - - - neuroligin 2b [Source:ZFIN;Acc:ZDB-GENE-090918-3]
34. ESYT2 ESYT2 414 0.9 - 0.900 - - - - - - -
35. C8H1orf194 C8H1orf194 111 0.897 - 0.897 - - - - - - -
36. polr3c ENSDARG00000057562 123 0.897 - 0.897 - - - - - - - polymerase (RNA) III (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-040426-992]
37. hgfb ENSDARG00000079076 168 0.893 0.893 - - - - - - - - hepatocyte growth factor b [Source:ZFIN;Acc:ZDB-GENE-041014-3]
38. egln3 ENSDARG00000032553 280 0.892 - 0.892 - - - - - - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
39. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.891 - 0.891 - - - - - - - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
40. tdp1 ENSDARG00000073866 214 0.891 - - - - - - - - 0.891 tyrosyl-DNA phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-090909-1]
41. ENSDARG00000074705 ENSDARG00000074705 507 0.886 0.886 - - - - - - - -
42. phkg1a ENSDARG00000030604, ENSDARG00000114608 85 0.885 - 0.885 - - - - - - - phosphorylase kinase, gamma 1a (muscle) [Source:ZFIN;Acc:ZDB-GENE-061103-385]
43. MTBP ENSDARG00000090447 174 0.884 - - - - - - - - 0.884 MDM2 binding protein [Source:ZFIN;Acc:ZDB-GENE-120724-1]
44. slc29a4 ENSDARG00000059690 478 0.883 0.883 - - - - - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
45. trub1 ENSDARG00000053805 202 0.883 - - - - - - 0.883 - - TruB pseudouridine (psi) synthase family member 1 [Source:ZFIN;Acc:ZDB-GENE-080723-73]
46. CR388132.1 ENSDARG00000097728 61 0.882 - 0.882 - - - - - - -
47. SLC35G1 ENSDARG00000063268 91 0.882 - 0.882 - - - - - - - solute carrier family 35 member G1 [Source:HGNC Symbol;Acc:HGNC:26607]
48. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.881 - - - - - - - - 0.881 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
49. ccdc103 ENSDARG00000053455 81 0.88 - - - - - - - - 0.880 coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
50. isg20l2 ENSDARG00000102266 167 0.879 - - - - - - - - 0.879 interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
51. eda ENSDARG00000074591, ENSDARG00000113529 263 0.877 - 0.877 - - - - - - - ectodysplasin A [Source:ZFIN;Acc:ZDB-GENE-050107-6]
52. si:dkey-11f4.14 ENSDARG00000098461 35 0.874 - - - - - - - - 0.874 si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
53. ASTL ASTL 24 0.871 - - - - - - - - 0.871
54. si:dkey-203a12.2 ENSDARG00000102271 7 0.871 - - - - - - - - 0.871 si:dkey-203a12.2 [Source:ZFIN;Acc:ZDB-GENE-091118-100]
55. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.871 - - - - - - - - 0.871 si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
56. NUGGC_3 NUGGC_3 10 0.871 - - - - - - - - 0.871
57. si:dkeyp-75b4.10 ENSDARG00000079043 7 0.871 - - - - - - - - 0.871 si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
58. si:ch211-79g12.2 si:ch211-79g12.2 7 0.871 - - - - - - - - 0.871
59. C18H15orf26 C18H15orf26 36 0.871 - - - - - - - - 0.871
60. si:dkey-242k1.6 ENSDARG00000101205 112 0.869 - - - - - - 0.869 - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
61. si:ch73-256j6.5 ENSDARG00000092732 65 0.868 - - - - - - 0.868 - - si:ch73-256j6.5 [Source:ZFIN;Acc:ZDB-GENE-070705-225]
62. si:dkey-4c15.12 ENSDARG00000095350 119 0.867 - 0.867 - - - - - - - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
63. tm9sf1 ENSDARG00000022970 113 0.867 - - - - - 0.867 - - - transmembrane 9 superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-64]
64. cygb1 ENSDARG00000099371 63 0.867 - - - - - - - - 0.867 cytoglobin 1 [Source:ZFIN;Acc:ZDB-GENE-020513-1]
65. sp5l ENSDARG00000115868 361 0.867 - - - - - - - - 0.867 Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
66. pik3ap1 ENSDARG00000078285 23 0.867 - - - - - - - - 0.867 phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
67. BX323876.2 ENSDARG00000104577 62 0.864 - 0.864 - - - - - - -
68. FP017279.3 FP017279.3 31 0.863 - 0.863 - - - - - - -
69. SOX8 SOX8 22 0.863 - - - - - - - - 0.863
70. si:ch73-68b22.2 ENSDARG00000094609 18 0.861 - - - - - - - - 0.861 si:ch73-68b22.2 [Source:ZFIN;Acc:ZDB-GENE-091204-355]
71. crygs1 ENSDARG00000042992 45 0.86 - 0.860 - - - - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
72. serpine3 ENSDARG00000057108 49 0.86 - - - - - - - - 0.860 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
73. foxq1b ENSDARG00000055395 549 0.86 - 0.860 - - - - - - - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
74. nostrin ENSDARG00000077866 85 0.859 0.859 - - - - - - - - nitric oxide synthase trafficking [Source:ZFIN;Acc:ZDB-GENE-070522-2]
75. si:dkey-10g2.5 si:dkey-10g2.5 72 0.858 - - - - - - - - 0.858
76. si:ch73-196k8.2 si:ch73-196k8.2 427 0.858 0.858 - - - - - - - -
77. ponzr6 ENSDARG00000036382 16 0.856 - - - - - - - - 0.856 plac8 onzin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-081104-326]
78. MFAP4_6 MFAP4_6 162 0.856 - - - - - - - - 0.856
79. acp5b ENSDARG00000101456, ENSDARG00000109721, ENSDARG00000110522 48 0.856 - - - - - - - - 0.856 acid phosphatase 5b, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040718-151]
80. si:rp71-68n21.11 si:rp71-68n21.11 146 0.855 0.855 - - - - - - - -
81. klhl38 klhl38 44 0.854 - - - - - 0.854 - - -
82. sfxn5a ENSDARG00000103595 11 0.853 - - - - - - - - 0.853 sideroflexin 5a [Source:ZFIN;Acc:ZDB-GENE-090312-174]
83. raly ENSDARG00000059972 481 0.853 - - - - - - 0.853 - - RALY heterogeneous nuclear ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-041010-127]
84. relt ENSDARG00000099724 138 0.851 - - - - - - - - 0.851 RELT, TNF receptor [Source:ZFIN;Acc:ZDB-GENE-040426-2361]
85. tpra ENSDARG00000103004 111 0.851 - - - - - - - - 0.851 translocated promoter region a, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-081104-2]
86. SFT2D2_1 SFT2D2_1 219 0.851 - - - - - - - - 0.851
87. SNORA57 SNORA57 148 0.849 - 0.849 - - - - - - -
88. lpcat1 ENSDARG00000011506 263 0.846 - 0.846 - - - - - - - lysophosphatidylcholine acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-915]
89. fam173b ENSDARG00000033451 513 0.845 - - - - - - - - 0.845 family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
90. si:dkey-192i18.3 si:dkey-192i18.3 47 0.844 - - - - - - - - 0.844
91. si:dkey-229d11.5 ENSDARG00000094392 33 0.844 - - - - - - - - 0.844 si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
92. ssna1 ENSDARG00000101300 403 0.844 0.844 - - - - - - - - Sjogren syndrome nuclear autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-081104-255]
93. BDP1_1 BDP1_1 317 0.842 - - - - - - - - 0.842
94. si:ch73-299h12.9 ENSDARG00000104488 81 0.842 - - - - - 0.842 - - - si:ch73-299h12.9 [Source:ZFIN;Acc:ZDB-GENE-081031-87]
95. dph3 ENSDARG00000043360 117 0.842 - 0.842 - - - - - - - diphthamide biosynthesis 3 [Source:ZFIN;Acc:ZDB-GENE-050522-545]
96. cyp2p6 ENSDARG00000042978 46 0.841 - 0.841 - - - - - - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
97. BAALC 250 0.841 - 0.841 - - - - - - - brain and acute leukemia, cytoplasmic
98. si:ch211-113a14.19 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 22 0.841 - 0.841 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
99. si:ch211-174j14.2 ENSDARG00000093015 111 0.839 - 0.839 - - - - - - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
100. tysnd1 ENSDARG00000074895 85 0.839 - - - - - - - - 0.839 trypsin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8525]

There are 661 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA