Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ctrl

Gene Name Gene ID Reads Annotation
ctrl ENSDARG00000068680 18 chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]










Genes with expression patterns similar to ctrl

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ctrl ENSDARG00000068680 18 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
2. rhoga ENSDARG00000068653 13 1.884 1.000 - - 0.884 - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
3. CABZ01023255.1 ENSDARG00000099984 13 1.816 - - - - 0.921 - - - 0.895 NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218]
4. CR847906.1 ENSDARG00000099493 88 1.809 1.000 - - - - 0.809 - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
5. FUK ENSDARG00000032650 20 1.79 - - - 0.891 - - - - 0.899 fucokinase [Source:ZFIN;Acc:ZDB-GENE-110819-1]
6. BPHL ENSDARG00000102877 28 1.783 - - - - 0.921 - - 0.862 - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
7. rictora ENSDARG00000100867 20 1.78 1.000 - - - - - - - 0.780 RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
8. RNF14_3 RNF14_3 15 1.78 - - - - 0.866 - - 0.914 -
9. CR749741.5 CR749741.5 6 1.778 - - - - - - 0.778 1.000 -
10. rgs9a ENSDARG00000037925 3 1.767 1.000 - 0.767 - - - - - - regulator of G protein signaling 9a [Source:ZFIN;Acc:ZDB-GENE-060929-92]
11. mkrn2 ENSDARG00000007630 127 1.759 - - - 0.866 - 0.893 - - - makorin, ring finger protein, 2 [Source:ZFIN;Acc:ZDB-GENE-020213-2]
12. nrn1b ENSDARG00000042656 44 1.746 0.796 - - - - 0.950 - - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
13. si:ch211-113a14.19 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 22 1.723 - - 0.799 - - - - 0.924 - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
14. nudt4a ENSDARG00000057767, ENSDARG00000110626 106 1.72 0.863 - - - - 0.857 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4a [Source:ZFIN;Acc:ZDB-GENE-031010-33]
15. BX322605.2 BX322605.2 75 1.719 - - - - - - 0.938 - 0.781
16. BX571823.1 BX571823.1 2 1.696 - - 0.767 0.929 - - - - -
17. FIBCD1 ENSDARG00000074640 56 1.674 0.758 - - - - 0.916 - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
18. adck1 ENSDARG00000062561 22 1.668 0.732 - - - - 0.936 - - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
19. si:dkey-220k22.3 ENSDARG00000094693 166 1.664 0.722 - - - - 0.942 - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
20. kcng1 ENSDARG00000099038 23 1.656 - - - - - 0.955 0.701 - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
21. zgc:85910 zgc:85910 299 1.644 0.711 - - - - 0.933 - - -
22. wars2 ENSDARG00000011801 134 1.643 - - - - - 0.911 - - 0.732 tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
23. ust ENSDARG00000006044 322 1.602 0.890 - - - - 0.712 - - - uronyl-2-sulfotransferase [Source:ZFIN;Acc:ZDB-GENE-041001-163]
24. tmem200a ENSDARG00000031540 52 1.587 - - - - 0.878 0.709 - - - transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]
25. si:dkey-10f21.16 si:dkey-10f21.16 252 1.558 - - - - 0.702 0.856 - - -
26. ddb2 ENSDARG00000041140, ENSDARG00000114723 827 1.557 - - - - - 0.844 0.713 - - damage-specific DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-169]
27. RBM20 74 1.551 0.773 - - - - - 0.778 - - RNA binding motif protein 20, transcript variant X1
28. sh3bp1 ENSDARG00000078119 5 1.545 - - 0.767 - - - 0.778 - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
29. cabp2a ENSDARG00000052016 19 1.529 0.751 - - - - - 0.778 - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
30. COLQ ENSDARG00000019692 164 1.428 - - - - - 0.704 0.724 - - collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-110411-119]
31. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 1.000 - - - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
32. FP015916.1 FP015916.1 3 1 - - - - - - - 1.000 -
33. zgc:174945 ENSDARG00000062057, ENSDARG00000112119 3 1 - - - - - - - 1.000 - zgc:174945 [Source:ZFIN;Acc:ZDB-GENE-080204-80]
34. CABZ01046432.1 ENSDARG00000079325 11 1 1.000 - - - - - - - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
35. si:ch73-189n23.1 ENSDARG00000086247 15 1 1.000 - - - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
36. zgc:153441 ENSDARG00000054797 9 1 1.000 - - - - - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
37. tmprss13a ENSDARG00000100969 84 1 1.000 - - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
38. BX897671.1 BX897671.1 10 1 1.000 - - - - - - - -
39. grapb ENSDARG00000022668 6 1 1.000 - - - - - - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
40. si:ch211-202n12.5 si:ch211-202n12.5 19 1 1.000 - - - - - - - -
41. BX897714.3 BX897714.3 3 1 1.000 - - - - - - - -
42. GPR137B_1 GPR137B_1 8 1 1.000 - - - - - - - -
43. CABZ01072557.1 CABZ01072557.1 9 1 1.000 - - - - - - - -
44. si:dkey-179o14.4 si:dkey-179o14.4 2 1 1.000 - - - - - - - -
45. GLIPR1 GLIPR1 37 1 1.000 - - - - - - - -
46. si:ch211-195i24.1 si:ch211-195i24.1 10 1 1.000 - - - - - - - -
47. tceb3 40 1 1.000 - - - - - - - - transcription elongation factor B (SIII), polypeptide 3
48. ZBTB42 ENSDARG00000102761 2 1 1.000 - - - - - - - - zinc finger and BTB domain containing 42 [Source:ZFIN;Acc:ZDB-GENE-130730-2]
49. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 1.000 - - - - - - - - centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
50. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
51. gadd45aa ENSDARG00000043581 114 1 1.000 - - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
52. SLC9A3R2_1 SLC9A3R2_1 28 1 1.000 - - - - - - - -
53. KCNK7 ENSDARG00000057331 5 1 1.000 - - - - - - - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
54. VPS13B VPS13B 1 1 1.000 - - - - - - - -
55. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 1.000 - - - - - - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
56. prkab1a ENSDARG00000044183 264 1 1.000 - - - - - - - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
57. lgi1b ENSDARG00000058421 12 1 1.000 - - - - - - - - leucine-rich, glioma inactivated 1b [Source:ZFIN;Acc:ZDB-GENE-060217-1]
58. ptpn6_1 ENSDARG00000089043 22 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
59. MSH4 ENSDARG00000075826 37 1 1.000 - - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
60. CU633479.6 ENSDARG00000116146 4 1 1.000 - - - - - - - -
61. CU062628.1 ENSDARG00000090267 3 1 - - - - - - - 1.000 - trypsin-2-like [Source:NCBI gene;Acc:103908930]
62. C25H19orf40 C25H19orf40 17 1 1.000 - - - - - - - -
63. si:ch211-80h18.1 ENSDARG00000078522 1941 1 1.000 - - - - - - - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
64. zgc:194275 ENSDARG00000074014 130 1 1.000 - - - - - - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
65. CR387932.1 ENSDARG00000097344 2 1 1.000 - - - - - - - -
66. aven ENSDARG00000002894 49 1 1.000 - - - - - - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
67. carm1l ENSDARG00000091531 13 1 1.000 - - - - - - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
68. CR936371.2 ENSDARG00000117302 2 1 1.000 - - - - - - - -
69. si:ch73-60p2.1 si:ch73-60p2.1 21 1 - - - - - - - 1.000 -
70. si:dkey-167k11.3 si:dkey-167k11.3 3 1 1.000 - - - - - - - -
71. ms4a17a.1 ENSDARG00000043798 7 1 1.000 - - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
72. si:dkey-23a23.1 ENSDARG00000094824 1 1 1.000 - - - - - - - - si:dkey-23a23.1 [Source:ZFIN;Acc:ZDB-GENE-060503-65]
73. FOXL2 239 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
74. ciz1b ENSDARG00000089461 57 1 1.000 - - - - - - - - cdkn1a interacting zinc finger protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2933]
75. si:ch211-67f13.8 ENSDARG00000079155 7 1 - - - - - - - 1.000 - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
76. slc9a3.2 ENSDARG00000036722 31 1 - - - - - - - 1.000 - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
77. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1 1.000 - - - - - - - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
78. RNF122 RNF122 29 1 1.000 - - - - - - - -
79. ADAM12 ENSDARG00000116062 35 1 1.000 - - - - - - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
80. klhl32 ENSDARG00000003576 99 1 1.000 - - - - - - - - kelch-like family member 32 [Source:ZFIN;Acc:ZDB-GENE-070209-47]
81. cyp1c1 ENSDARG00000101195 190 1 1.000 - - - - - - - - cytochrome P450, family 1, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050522-501]
82. si:ch211-113a14.29_1 4 1 - - - - - - - 1.000 - si:ch211-113a14.29
83. cx30.9 ENSDARG00000070362 17 1 1.000 - - - - - - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
84. pvalb5 ENSDARG00000032836 242 1 1.000 - - - - - - - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
85. fam129ab ENSDARG00000023053 1 1 1.000 - - - - - - - - family with sequence similarity 129, member Ab [Source:ZFIN;Acc:ZDB-GENE-070912-688]
86. cgrrf1 ENSDARG00000037040, ENSDARG00000109850, ENSDARG00000110308 50 1 1.000 - - - - - - - - cell growth regulator with ring finger domain 1 [Source:ZFIN;Acc:ZDB-GENE-040724-100]
87. zgc:195633_2 34 1 1.000 - - - - - - - - zgc:195633
88. ANO7 ANO7 54 1 1.000 - - - - - - - -
89. CABZ01034707.1 CABZ01034707.1 122 1 1.000 - - - - - - - -
90. si:ch211-133l5.8 ENSDARG00000027676 23 1 1.000 - - - - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
91. si:ch1073-525h16.1 si:ch1073-525h16.1 1 1 1.000 - - - - - - - -
92. podn ENSDARG00000019025, ENSDARG00000113615 1 1 1.000 - - - - - - - - podocan [Source:ZFIN;Acc:ZDB-GENE-100922-117]
93. si:dkey-30f3.2 ENSDARG00000098087 6 1 1.000 - - - - - - - - si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70]
94. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1 1.000 - - - - - - - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
95. or135-1 ENSDARG00000053648 1 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 135, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-32]
96. ulk4 ENSDARG00000004176 85 1 1.000 - - - - - - - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
97. slc15a4 ENSDARG00000102612 1096 1 1.000 - - - - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
98. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 1.000 - - - - - - - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
99. si:ch211-232m10.6 ENSDARG00000070931 2 1 1.000 - - - - - - - - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
100. diaph3_1 ENSDARG00000090785 3 1 1.000 - - - - - - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]

There are 1606 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA