Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ctnnb1

Gene Name Gene ID Reads Annotation
ctnnb1 ENSDARG00000014571 12004 catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]










Genes with expression patterns similar to ctnnb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ctnnb1 ENSDARG00000014571 12004 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
2. rbm4.3 ENSDARG00000022129 28571 3.268 - - - - 0.880 0.731 0.945 0.712 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
3. mab21l1 ENSDARG00000102047 4665 3.053 - - 0.796 0.733 0.818 - - 0.706 - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
4. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 2.721 - - - - - 0.736 0.989 - 0.996 chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
5. TNRC6C_1 TNRC6C_1 6574 2.65 - 0.829 - - - 0.825 0.996 - -
6. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.525 - - 0.717 - - - - 0.811 0.997 serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
7. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 2.51 - - - - - 0.741 - 0.775 0.994 FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
8. h2afvb ENSDARG00000116491 35692 2.494 - 0.889 - - - 0.818 - 0.787 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
9. lsm12b ENSDARG00000109510 14459 2.43 0.701 0.744 - - - - 0.985 - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
10. jarid2b ENSDARG00000062268 2206 2.41 - - 0.749 - 0.896 - - 0.765 - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
11. ptenb ENSDARG00000056623 5783 2.37 - 0.775 0.711 - - 0.884 - - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
12. srrm1 ENSDARG00000001244 4972 2.367 - 0.778 0.813 - - 0.776 - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
13. akirin2 ENSDARG00000058729 13245 2.339 - - - 0.776 - 0.822 - 0.741 - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
14. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 2.333 - - 0.740 0.788 - 0.805 - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
15. TAF15 ENSDARG00000070019 5102 2.327 - - 0.752 - - 0.779 - 0.796 - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
16. rbm25 rbm25 3629 2.326 - 0.754 - - 0.810 - - 0.762 -
17. u2af2b ENSDARG00000011740 6946 2.287 - - 0.790 0.766 - - - 0.731 - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
18. dab2ipa ENSDARG00000069484 1138 2.281 - 0.751 0.751 - - - - 0.779 - DAB2 interacting protein a [Source:ZFIN;Acc:ZDB-GENE-081104-516]
19. arhgef2 ENSDARG00000075819 2173 2.249 - 0.734 0.736 - - - - 0.779 - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
20. fam89a ENSDARG00000079979 4375 2.234 - 0.751 - - 0.766 0.717 - - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
21. mapk6 ENSDARG00000032103 6422 1.99 - - - - - - 0.994 - 0.996 mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
22. lect1 7551 1.951 - - - - - - 0.957 - 0.994 leukocyte cell derived chemotaxin 1, transcript variant X1
23. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.834 - 0.860 - - - - 0.974 - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
24. NDUFB2 ENSDARG00000045490 9141 1.819 - - - - 0.824 - - - 0.995 NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
25. snrnp27 ENSDARG00000035625 9080 1.788 - - - - 0.791 - 0.997 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
26. arf6b ENSDARG00000052928 4585 1.779 - - - - 0.783 - 0.996 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
27. si:dkey-13i19.8 ENSDARG00000093058 4617 1.771 - 0.799 - - - - 0.972 - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
28. fbl ENSDARG00000053912 5891 1.762 - - - - - - 0.993 0.769 - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
29. fundc2 ENSDARG00000103740 3856 1.753 - 0.758 - - - - 0.995 - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
30. ep300b ENSDARG00000061108 5173 1.752 - - 0.789 - - - - - 0.963 E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
31. hoxb3a ENSDARG00000029263 5493 1.749 - 0.756 - - - - 0.993 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
32. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.748 - - - - - 0.755 0.993 - -
33. tob1b ENSDARG00000021372 7048 1.745 - 0.751 - - - - 0.994 - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
34. ddx5 ENSDARG00000038068 35302 1.738 - - - 0.749 - - - - 0.989 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
35. zranb2 ENSDARG00000044332 6723 1.716 - 0.720 - - - - 0.996 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
36. prkacba ENSDARG00000001782 1340 1.715 - 0.722 - - - - 0.993 - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
37. sub1a ENSDARG00000053446 13383 1.714 0.717 - - - - - 0.997 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
38. mapre1b ENSDARG00000002659 9119 1.711 - - - - - - 0.995 0.716 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
39. zbtb18 ENSDARG00000028228 3653 1.703 - - - - - - 0.992 0.711 - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
40. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 1.702 - - - - - 0.709 0.993 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
41. rbms1a ENSDARG00000074023 2742 1.701 - 0.707 - - - - 0.994 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
42. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 1.696 - - 0.702 - - - 0.994 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
43. ubr5 ENSDARG00000018192 9267 1.672 - - 0.793 - 0.879 - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
44. cbx5 ENSDARG00000061187 24026 1.672 - - - - 0.870 0.802 - - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
45. SERBP1 SERBP1 9276 1.659 - - - - 0.901 0.758 - - -
46. foxp4 ENSDARG00000076120 9458 1.654 - 0.779 0.875 - - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
47. si:ch73-46j18.5 ENSDARG00000092467 6002 1.65 - 0.854 0.796 - - - - - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
48. tuba8l ENSDARG00000042708 48551 1.649 - - - 0.742 - - 0.907 - - tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
49. cand1 ENSDARG00000017841 8164 1.647 - 0.769 - - - 0.878 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
50. MAP4K4 ENSDARG00000098670 4665 1.638 - - 0.733 - 0.905 - - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
51. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.636 - - - - - - - 0.714 0.922 TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
52. hnrnpk ENSDARG00000018914 8841 1.635 - - - - 0.855 - - 0.780 - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
53. nucks1a ENSDARG00000078473 28285 1.633 - - 0.868 - - 0.765 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
54. tmpoa ENSDARG00000007315 3638 1.618 - - - - 0.884 0.734 - - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
55. tnrc6b ENSDARG00000074161 4597 1.608 - - 0.701 - 0.907 - - - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
56. dut ENSDARG00000106529 3120 1.602 - 0.878 - - - - - 0.724 - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
57. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.601 - 0.878 0.723 - - - - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
58. hnrnpab hnrnpab 72354 1.598 - - - - - 0.749 0.849 - -
59. smarcb1b ENSDARG00000011594 2413 1.596 - 0.793 - - - - - 0.803 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
60. CABZ01013938.1 CABZ01013938.1 4497 1.594 - - - - 0.867 0.727 - - -
61. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.591 - - 0.766 - 0.825 - - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
62. top2a ENSDARG00000024488 4273 1.588 - - - - 0.828 0.760 - - - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
63. tmem198a ENSDARG00000042115 1694 1.586 - - 0.727 - 0.859 - - - - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
64. CDCA4 ENSDARG00000042319 7918 1.584 - - 0.724 - 0.860 - - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
65. CREBZF ENSDARG00000089787 4261 1.581 - 0.848 - - - 0.733 - - - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
66. col11a1b ENSDARG00000009014 9998 1.58 - - - - 0.787 0.793 - - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
67. tra2a ENSDARG00000007863 4449 1.573 - - - - 0.824 0.749 - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
68. col6a2 ENSDARG00000061436 5063 1.573 - 0.849 - - - 0.724 - - - collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
69. chd4b ENSDARG00000025789 14299 1.571 - 0.780 - - 0.791 - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
70. dag1 ENSDARG00000016153 10886 1.569 - 0.851 - - 0.718 - - - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
71. IM:7163548 IM:7163548 6540 1.566 - - - - 0.834 0.732 - - -
72. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.564 - - - 0.748 - 0.816 - - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
73. msna ENSDARG00000058128, ENSDARG00000114614 23727 1.562 - - - 0.711 0.851 - - - - moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
74. CHD1 ENSDARG00000103787 1645 1.562 - - 0.840 - - - - 0.722 - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
75. fkbp9 ENSDARG00000005023 17518 1.562 - 0.851 - - - 0.711 - - - FK506 binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-040801-23]
76. ywhaqb ENSDARG00000023323 28138 1.559 - - 0.708 - - - - 0.851 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
77. ckap5 ENSDARG00000102674 5068 1.559 - - 0.736 - 0.823 - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
78. dmbx1a ENSDARG00000009922 284 1.557 - - 0.757 - - - - 0.800 - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
79. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.557 - 0.833 - - - 0.724 - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
80. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.557 - 0.785 - - - 0.772 - - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
81. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.556 - - 0.719 - - - - 0.837 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
82. tcp1 ENSDARG00000017891 7946 1.554 - - - - 0.840 - - 0.714 - t-complex 1 [Source:ZFIN;Acc:ZDB-GENE-990714-24]
83. bud31 ENSDARG00000017084 3892 1.549 - - - - - 0.719 - 0.830 - BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
84. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.549 - 0.750 - - 0.799 - - - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
85. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.548 - - 0.770 - - - - 0.778 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
86. irf2bp2a ENSDARG00000004702 6719 1.547 - 0.755 - - 0.792 - - - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
87. RANBP3 RANBP3 2513 1.545 - - 0.707 - 0.838 - - - -
88. efnb2a ENSDARG00000020164 5262 1.542 - - - - - 0.770 - 0.772 - ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
89. puf60b ENSDARG00000001241 13827 1.542 - 0.718 - - - 0.824 - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
90. rac1 rac1 7341 1.541 - 0.707 - - - 0.834 - - -
91. ube2e1 ENSDARG00000116649 10656 1.54 - 0.827 - - - 0.713 - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
92. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.54 - - 0.763 0.777 - - - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
93. dctn3 ENSDARG00000041363 3351 1.539 - 0.744 - - 0.795 - - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
94. sin3b ENSDARG00000062472 2025 1.538 - - 0.708 - - - - 0.830 - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
95. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.538 - - 0.701 - - - - 0.837 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
96. kmt2bb ENSDARG00000060697 5230 1.537 - - 0.818 - - 0.719 - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
97. vezf1b ENSDARG00000061030 1410 1.535 - - 0.716 - - 0.819 - - - vascular endothelial zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-060825-121]
98. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.534 - - 0.735 - 0.799 - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
99. ilf3b ENSDARG00000105177 9473 1.533 - - - 0.728 - - - 0.805 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
100. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.532 - 0.723 - - - 0.809 - - - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]

There are 1288 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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