Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cthrc1b

Gene Name Gene ID Reads Annotation
cthrc1b ENSDARG00000001971 44 collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]










Genes with expression patterns similar to cthrc1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cthrc1b ENSDARG00000001971 44 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
2. CR383676.3_2 CR383676.3_2 9 2.548 1.000 - - - - 0.750 0.798 - -
3. NPFFR1 ENSDARG00000111997 29 2 1.000 - - - - - 1.000 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
4. VWDE_1 VWDE_1 2 2 1.000 - - - - - 1.000 - -
5. BX682234.3 BX682234.3 7 2 - 1.000 - - - - 1.000 - -
6. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 2 - 1.000 - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
7. ppp1r3db ENSDARG00000076248 32 1.957 0.957 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
8. CD200_2 CD200_2 47 1.943 1.000 - - - - - 0.943 - -
9. GAS2_1 GAS2_1 16 1.844 - 1.000 - - - 0.844 - - -
10. fancg ENSDARG00000024967, ENSDARG00000113462 82 1.836 1.000 - - - - - 0.836 - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
11. btbd3b ENSDARG00000087517 107 1.813 - 1.000 - - - 0.813 - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
12. arsa ENSDARG00000042270 74 1.798 - 1.000 - - - - 0.798 - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
13. slc12a5b ENSDARG00000078187 329 1.797 0.797 1.000 - - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
14. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.777 0.777 1.000 - - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
15. CR376785.2 CR376785.2 175 1.766 - 1.000 - - - 0.766 - - -
16. rapgef3 ENSDARG00000079291 69 1.761 1.000 0.761 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
17. si:dkey-254e13.13 si:dkey-254e13.13 6 1.75 1.000 - - - - 0.750 - - -
18. BTBD17 BTBD17 53 1.75 - 1.000 - - - 0.750 - - -
19. mir196b ENSDARG00000081346 35 1.75 1.000 - - - - 0.750 - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
20. PGBD4 ENSDARG00000079328 20 1.75 - 1.000 - - - 0.750 - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
21. hyal3 ENSDARG00000036818 23 1.75 - - - - - 0.750 1.000 - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
22. WNK3 WNK3 36 1.75 - 1.000 - - - 0.750 - - -
23. pag1 ENSDARG00000055875 21 1.738 - 1.000 0.738 - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
24. SSBP2 ENSDARG00000099727 22 1.737 - 1.000 0.737 - - - - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
25. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1.726 1.000 - - 0.726 - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
26. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1.703 - 1.000 - 0.703 - - - - -
27. CABZ01026370.1 CABZ01026370.1 286 1.689 0.892 0.797 - - - - - - -
28. RAB1B RAB1B 20 1.678 - - - - - 0.750 0.928 - -
29. si:dkey-30j22.1 ENSDARG00000042829 25 1.677 0.924 - - 0.753 - - - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
30. INSM2 ENSDARG00000020655 122 1.655 0.905 - - - - 0.750 - - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
31. lrrc4.2 ENSDARG00000003020 235 1.649 - 0.908 0.741 - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
32. JTB ENSDARG00000070150 135 1.645 - 0.851 - - - - 0.794 - - jumping translocation breakpoint [Source:ZFIN;Acc:ZDB-GENE-060503-674]
33. CU929230.1 ENSDARG00000030665 48 1.633 - 0.883 - - - 0.750 - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
34. fam136a ENSDARG00000098401 50 1.628 0.926 - - - - - 0.702 - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
35. CABZ01080142.1 CABZ01080142.1 52 1.61 - 0.763 - - - - 0.847 - -
36. si:dkey-156m18.1 si:dkey-156m18.1 13 1.598 - 0.896 0.702 - - - - - -
37. BRSK2 BRSK2 66 1.592 - - - - - 0.743 0.849 - -
38. mir451a 131 1.545 - - - - - 0.728 0.817 - - microRNA 451a
39. sumf2 ENSDARG00000069497 51 1.533 - 0.754 - - - - 0.779 - - sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55]
40. si:dkey-1b17.1 ENSDARG00000102258 15 1.502 - - 0.761 0.741 - - - - - si:dkey-1b17.1 [Source:ZFIN;Acc:ZDB-GENE-050208-688]
41. zgc:174224_2 ENSDARG00000093875 22 1.482 - 0.731 - - - - 0.751 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
42. GPR180 73 1.463 - 0.713 - - - 0.750 - - - G protein-coupled receptor 180, transcript variant X2
43. NYAP2 NYAP2 7 1 1.000 - - - - - - - -
44. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 1.000 - - - - - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
45. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c
46. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1 - 1.000 - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
47. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
48. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 - 1.000 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
49. cpeb1b ENSDARG00000008454 37 1 1.000 - - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
50. si:dkey-45j10.2 si:dkey-45j10.2 5 1 1.000 - - - - - - - -
51. hbaa2 ENSDARG00000069735 10 1 - - - - - - 1.000 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
52. CT030048.2 CT030048.2 3 1 - 1.000 - - - - - - -
53. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 - 1.000 - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
54. BX649415.4 BX649415.4 3 1 - 1.000 - - - - - - -
55. lipt2 ENSDARG00000069852 14 1 - - - - - - 1.000 - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
56. calml4a ENSDARG00000075800 14 1 - 1.000 - - - - - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
57. CR762480.3 CR762480.3 3 1 - 1.000 - - - - - - -
58. nitr3a_1 ENSDARG00000110676 44 1 - 1.000 - - - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
59. Mar-09 Mar-09 126 1 - 1.000 - - - - - - -
60. si:dkey-3d4.1 si:dkey-3d4.1 37 1 - 1.000 - - - - - - -
61. tcf23 ENSDARG00000087381 6 1 - 1.000 - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
62. CU695076.1 CU695076.1 7 1 - 1.000 - - - - - - -
63. TENM3 ENSDARG00000005479 39 1 1.000 - - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
64. atat1 ENSDARG00000004472 700 1 - 1.000 - - - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
65. ZNF648 ENSDARG00000104823 194 1 - 1.000 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
66. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
67. DNAJC14 ENSDARG00000105398 20 1 - 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
68. nyx ENSDARG00000061791 2 1 - 1.000 - - - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
69. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - - - - 1.000 - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
70. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1 - 1.000 - - - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
71. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 1.000 - - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
72. si:dkey-57a22.13 ENSDARG00000092345, ENSDARG00000116169 2 1 - 1.000 - - - - - - - si:dkey-57a22.13 [Source:ZFIN;Acc:ZDB-GENE-081104-425]
73. TRIM35_3 TRIM35_3 172 1 - - - - - - 1.000 - -
74. kcnj14 ENSDARG00000075914 38 1 - 1.000 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
75. zgc:174153 ENSDARG00000079376 12007 1 - 1.000 - - - - - - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
76. si:dkey-11c5.14 si:dkey-11c5.14 15 1 - 1.000 - - - - - - -
77. igsf21b ENSDARG00000056084 6 1 - 1.000 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
78. SNORA81 SNORA81 47 1 - - - - - - 1.000 - -
79. sgms2 57 1 - 1.000 - - - - - - - sphingomyelin synthase 2, transcript variant X1
80. NACC1 NACC1 9 1 - 1.000 - - - - - - -
81. tmem184b tmem184b 2 1 1.000 - - - - - - - -
82. map2k4a ENSDARG00000063583 38 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
83. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 1 - 1.000 - - - - - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
84. gpat2 ENSDARG00000053575 12 1 1.000 - - - - - - - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
85. UBASH3B_1 UBASH3B_1 28 1 1.000 - - - - - - - -
86. ARX ARX 71 1 - 1.000 - - - - - - -
87. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 - - - - - - 1.000 - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
88. BX005305.4 ENSDARG00000114385 6 1 - 1.000 - - - - - - - legumain [Source:NCBI gene;Acc:569153]
89. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 1 1.000 - - - - - - - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
90. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - 1.000 - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
91. si:ch211-113a14.15_1 2 1 - - - - - - 1.000 - - si:ch211-113a14.15
92. FP236162.1 FP236162.1 2 1 1.000 - - - - - - - -
93. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
94. aldh1a3 ENSDARG00000076933 95 1 - 1.000 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
95. ccdc64 ccdc64 2 1 - 1.000 - - - - - - -
96. BX511006.2 BX511006.2 29 1 - 1.000 - - - - - - -
97. mir10b-2 116 1 - - - - - - 1.000 - - microRNA 10b-2
98. si:ch211-235f12.5 si:ch211-235f12.5 1 1 1.000 - - - - - - - -
99. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - 1.000 - - - - - - -
100. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]

There are 892 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA