Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cthrc1b

Gene Name Gene ID Reads Annotation
cthrc1b ENSDARG00000001971 44 collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]










Genes with expression patterns similar to cthrc1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cthrc1b ENSDARG00000001971 44 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
2. CR383676.3_2 CR383676.3_2 9 2.548 1.000 - - - - 0.750 0.798 - -
3. NPFFR1 ENSDARG00000111997 29 2 1.000 - - - - - 1.000 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
4. BX682234.3 BX682234.3 7 2 - 1.000 - - - - 1.000 - -
5. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 2 - 1.000 - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
6. VWDE_1 VWDE_1 2 2 1.000 - - - - - 1.000 - -
7. ppp1r3db ENSDARG00000076248 32 1.957 0.957 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
8. CD200_2 CD200_2 47 1.943 1.000 - - - - - 0.943 - -
9. GAS2_1 GAS2_1 16 1.844 - 1.000 - - - 0.844 - - -
10. fancg ENSDARG00000024967, ENSDARG00000113462 82 1.836 1.000 - - - - - 0.836 - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
11. btbd3b ENSDARG00000087517 107 1.813 - 1.000 - - - 0.813 - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
12. arsa ENSDARG00000042270 74 1.798 - 1.000 - - - - 0.798 - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
13. slc12a5b ENSDARG00000078187 329 1.797 0.797 1.000 - - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
14. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.777 0.777 1.000 - - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
15. CR376785.2 CR376785.2 175 1.766 - 1.000 - - - 0.766 - - -
16. rapgef3 ENSDARG00000079291 69 1.761 1.000 0.761 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
17. mir196b ENSDARG00000081346 35 1.75 1.000 - - - - 0.750 - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
18. WNK3 WNK3 36 1.75 - 1.000 - - - 0.750 - - -
19. BTBD17 BTBD17 53 1.75 - 1.000 - - - 0.750 - - -
20. hyal3 ENSDARG00000036818 23 1.75 - - - - - 0.750 1.000 - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
21. PGBD4 ENSDARG00000079328 20 1.75 - 1.000 - - - 0.750 - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
22. si:dkey-254e13.13 si:dkey-254e13.13 6 1.75 1.000 - - - - 0.750 - - -
23. pag1 ENSDARG00000055875 21 1.738 - 1.000 0.738 - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
24. SSBP2 ENSDARG00000099727 22 1.737 - 1.000 0.737 - - - - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
25. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1.726 1.000 - - 0.726 - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
26. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1.703 - 1.000 - 0.703 - - - - -
27. CABZ01026370.1 CABZ01026370.1 286 1.689 0.892 0.797 - - - - - - -
28. RAB1B RAB1B 20 1.678 - - - - - 0.750 0.928 - -
29. si:dkey-30j22.1 ENSDARG00000042829 25 1.677 0.924 - - 0.753 - - - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
30. INSM2 ENSDARG00000020655 122 1.655 0.905 - - - - 0.750 - - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
31. lrrc4.2 ENSDARG00000003020 235 1.649 - 0.908 0.741 - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
32. JTB ENSDARG00000070150 135 1.645 - 0.851 - - - - 0.794 - - jumping translocation breakpoint [Source:ZFIN;Acc:ZDB-GENE-060503-674]
33. CU929230.1 ENSDARG00000030665 48 1.633 - 0.883 - - - 0.750 - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
34. fam136a ENSDARG00000098401 50 1.628 0.926 - - - - - 0.702 - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
35. CABZ01080142.1 CABZ01080142.1 52 1.61 - 0.763 - - - - 0.847 - -
36. si:dkey-156m18.1 si:dkey-156m18.1 13 1.598 - 0.896 0.702 - - - - - -
37. BRSK2 BRSK2 66 1.592 - - - - - 0.743 0.849 - -
38. mir451a 131 1.545 - - - - - 0.728 0.817 - - microRNA 451a
39. sumf2 ENSDARG00000069497 51 1.533 - 0.754 - - - - 0.779 - - sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55]
40. si:dkey-1b17.1 ENSDARG00000102258 15 1.502 - - 0.761 0.741 - - - - - si:dkey-1b17.1 [Source:ZFIN;Acc:ZDB-GENE-050208-688]
41. zgc:174224_2 ENSDARG00000093875 22 1.482 - 0.731 - - - - 0.751 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
42. GPR180 73 1.463 - 0.713 - - - 0.750 - - - G protein-coupled receptor 180, transcript variant X2
43. zgc:92137 ENSDARG00000009443 0 1 - 1.000 - - - - - - - zgc:92137 [Source:ZFIN;Acc:ZDB-GENE-040801-179]
44. si:ch211-237c9.3 si:ch211-237c9.3 17 1 - 1.000 - - - - - - -
45. BX649415.4 BX649415.4 3 1 - 1.000 - - - - - - -
46. lhfpl2b ENSDARG00000098153 132 1 1.000 - - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
47. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - 1.000 - - - - - - -
48. aldh1a3 ENSDARG00000076933 95 1 - 1.000 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
49. CCDC50_1 CCDC50_1 1 1 - 1.000 - - - - - - -
50. cdk5r1a ENSDARG00000037916 46 1 1.000 - - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
51. dgkza ENSDARG00000014439 82 1 - - - - - - 1.000 - - diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]
52. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c
53. si:dkey-217f16.1 ENSDARG00000089602 17 1 1.000 - - - - - - - - si:dkey-217f16.1 [Source:ZFIN;Acc:ZDB-GENE-091116-95]
54. PEG3_36 PEG3_36 3 1 - 1.000 - - - - - - -
55. si:dkey-78a14.4 ENSDARG00000036066 17 1 - 1.000 - - - - - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
56. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
57. si:dkeyp-33c10.5 11 1 - 1.000 - - - - - - - si:dkeyp-33c10.5, transcript variant X2
58. si:ch73-27e22.7 ENSDARG00000093345 2 1 - 1.000 - - - - - - - si:ch73-27e22.7 [Source:ZFIN;Acc:ZDB-GENE-070705-235]
59. panx3 ENSDARG00000004627 7 1 - 1.000 - - - - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
60. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - 1.000 - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
61. si:dkey-45j10.2 si:dkey-45j10.2 5 1 1.000 - - - - - - - -
62. CABZ01073112.1 CABZ01073112.1 40 1 - - - - - - 1.000 - -
63. SNORA81_1 SNORA81_1 8 1 - - - - - - 1.000 - -
64. ftr76 ENSDARG00000076093 1 1 - 1.000 - - - - - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
65. vat1l ENSDARG00000101280 1 1 - 1.000 - - - - - - - vesicle amine transport 1-like [Source:ZFIN;Acc:ZDB-GENE-080204-21]
66. si:dkey-56m15.4 si:dkey-56m15.4 39 1 - 1.000 - - - - - - -
67. PEG3_17 PEG3_17 15 1 - - - - - - 1.000 - -
68. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
69. foxq1a ENSDARG00000030896 121 1 1.000 - - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
70. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - 1.000 - - - - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
71. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - 1.000 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
72. BX649497.1 BX649497.1 0 1 - 1.000 - - - - - - -
73. BX682234.1 ENSDARG00000074732 5 1 - - - - - - 1.000 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
74. si:dkey-11c5.14 si:dkey-11c5.14 15 1 - 1.000 - - - - - - -
75. si:dkeyp-85d8.3 si:dkeyp-85d8.3 0 1 - 1.000 - - - - - - -
76. KCNJ6 ENSDARG00000058985 71 1 - 1.000 - - - - - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
77. ltk ENSDARG00000042861, ENSDARG00000116109 76 1 - 1.000 - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
78. si:dkey-187i8.2 ENSDARG00000096624 8 1 - 1.000 - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
79. smcr8b ENSDARG00000015803 3 1 - 1.000 - - - - - - - Smith-Magenis syndrome chromosome region, candidate 8b [Source:ZFIN;Acc:ZDB-GENE-061122-1]
80. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 1.000 - - - - - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
81. CT573494.2 CT573494.2 58 1 - 1.000 - - - - - - -
82. rgs5b ENSDARG00000017860 55 1 - 1.000 - - - - - - - regulator of G protein signaling 5b [Source:ZFIN;Acc:ZDB-GENE-050417-359]
83. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
84. ccnd3 ENSDARG00000027391 1 1 1.000 - - - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
85. ARX ARX 71 1 - 1.000 - - - - - - -
86. lppr5b lppr5b 23 1 - 1.000 - - - - - - -
87. si:dkey-287f10.2 si:dkey-287f10.2 3 1 - 1.000 - - - - - - -
88. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1 - 1.000 - - - - - - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
89. TRIM14_3 TRIM14_3 7 1 - - - - - - 1.000 - -
90. CR762480.3 CR762480.3 3 1 - 1.000 - - - - - - -
91. KCNIP4 ENSDARG00000088100 86 1 - 1.000 - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
92. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1 - 1.000 - - - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
93. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
94. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 1.000 - - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
95. si:dkey-149m13.1 si:dkey-149m13.1 6 1 - 1.000 - - - - - - -
96. spred3 ENSDARG00000040358 134 1 - 1.000 - - - - - - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
97. zgc:153846 ENSDARG00000040738 1 1 - - - - - - 1.000 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
98. si:dkey-157g16.6 ENSDARG00000057062 12 1 - 1.000 - - - - - - - si:dkey-157g16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-189]
99. camk1ga ENSDARG00000044526 5 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
100. mocs1 ENSDARG00000078479 1 1 - 1.000 - - - - - - - molybdenum cofactor synthesis 1 [Source:ZFIN;Acc:ZDB-GENE-130215-1]

There are 892 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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