Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cthrc1a

Gene Name Gene ID Reads Annotation
cthrc1a ENSDARG00000087198 1001 collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]










Genes with expression patterns similar to cthrc1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cthrc1a ENSDARG00000087198 1001 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]
2. sox9a ENSDARG00000003293 812 2.382 - 0.761 - - - 0.785 0.836 - - SRY (sex determining region Y)-box 9a [Source:ZFIN;Acc:ZDB-GENE-001103-1]
3. chad ENSDARG00000045071 903 2.38 - 0.808 - - - 0.774 0.798 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
4. ryr3 ENSDARG00000071331 6795 2.38 - 0.709 - - - 0.772 0.899 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
5. aqp4 ENSDARG00000010565 624 2.362 - 0.759 - - - 0.753 0.850 - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
6. plod2 ENSDARG00000011821 1656 2.345 - 0.706 - - - 0.876 0.763 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
7. C12H10orf71 C12H10orf71 595 2.314 - 0.777 - - - 0.774 0.763 - -
8. pbxip1a ENSDARG00000071015 4960 2.291 0.750 0.716 - - - - 0.825 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
9. CR392006.1 CR392006.1 1401 2.25 - 0.723 - - - 0.727 0.800 - -
10. alpk3a ENSDARG00000078989 1992 2.228 - 0.744 - - - 0.758 0.726 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
11. COL22A1 COL22A1 4473 2.215 0.727 0.716 - - - - 0.772 - -
12. srpk3 ENSDARG00000005916 1546 2.192 0.705 0.701 - - - - 0.786 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
13. cacng1 cacng1 3118 2.188 - 0.757 - - - 0.720 0.711 - -
14. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.706 - - - - - 0.825 0.881 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
15. synpo2b ENSDARG00000077157 1009 1.703 - 0.853 - - - - 0.850 - - synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
16. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.694 - - - - - 0.839 0.855 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
17. mybphb ENSDARG00000003081 5208 1.694 - 0.773 - - - - 0.921 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
18. si:ch211-152c2.3 ENSDARG00000045898 3448 1.687 - - - - - 0.791 0.896 - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
19. CR792456.1 CR792456.1 783 1.677 - - - - - 0.745 0.932 - -
20. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.676 - 0.767 - - - - 0.909 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
21. BX323459.1 ENSDARG00000109508 1476 1.672 - - - - - 0.748 0.924 - -
22. crip2 ENSDARG00000070670 4844 1.671 - - - - - 0.800 0.871 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
23. C13H10orf71 3489 1.657 - 0.786 - - - - 0.871 - - chromosome 13 C10orf71 homolog
24. pi15a ENSDARG00000045378 2361 1.657 - - - - - 0.785 0.872 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
25. tgfb3 ENSDARG00000019367 2327 1.641 - - - - - 0.841 0.800 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
26. zgc:153662 zgc:153662 4604 1.639 0.791 - - - - - 0.848 - -
27. CU302436.1 ENSDARG00000114500 1619 1.637 0.842 - - - - - 0.795 - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
28. tgfbi ENSDARG00000071586 17779 1.636 - - - - - 0.854 0.782 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
29. BX255936.1 BX255936.1 327 1.635 - 0.787 - - - - 0.848 - -
30. CR450814.3 CR450814.3 608 1.635 - - - - - 0.786 0.849 - -
31. LIMD1_1 LIMD1_1 348 1.625 - 0.819 - - - - 0.806 - -
32. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.624 - - - - - 0.821 0.803 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
33. ank2b ENSDARG00000043313 3065 1.611 - 0.780 - - - - 0.831 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
34. ryr1b ENSDARG00000023797 5693 1.607 - 0.732 - - - - 0.875 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
35. smpx ENSDARG00000045302 2175 1.607 - - - - - 0.730 0.877 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
36. nkx3.2 ENSDARG00000037639 575 1.605 - - - - - 0.754 0.851 - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
37. srl ENSDARG00000104587 11126 1.604 - 0.757 - - - - 0.847 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
38. CABZ01086825.1 CABZ01086825.1 573 1.602 - 0.765 - - - - 0.837 - -
39. ptch2 ENSDARG00000055026 980 1.6 - - - - - 0.711 0.889 - - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
40. ppapdc3 ppapdc3 4924 1.6 - - - - - 0.739 0.861 - -
41. efemp2a ENSDARG00000094324 39261 1.596 0.766 - - - - - 0.830 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
42. tnw 16679 1.594 - 0.731 - - - - 0.863 - - tenascin W, transcript variant X2
43. klhl40a ENSDARG00000039052 2537 1.59 - 0.785 - - - - 0.805 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
44. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.588 - 0.785 - - - - 0.803 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
45. klhl21 ENSDARG00000039255 2550 1.587 - - - - - 0.741 0.846 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
46. FRMD5 ENSDARG00000075942 569 1.582 - - - - - 0.701 0.881 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
47. ablim2 ENSDARG00000055223 1934 1.58 - - - - - 0.788 0.792 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
48. ntla ntla 926 1.576 - - - - - 0.823 0.753 - -
49. xirp2a ENSDARG00000071113 7113 1.576 - 0.779 - - - - 0.797 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
50. sptb ENSDARG00000030490 7128 1.575 - - - - - 0.748 0.827 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
51. sulf1 ENSDARG00000038428 2748 1.574 0.865 0.709 - - - - - - - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
52. mtif2 ENSDARG00000063213, ENSDARG00000113856 377 1.573 0.851 - - - - 0.722 - - - mitochondrial translational initiation factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1092]
53. pvalb4 ENSDARG00000024433 35736 1.57 0.722 - - - - - 0.848 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
54. MUSTN1 MUSTN1 1882 1.569 - 0.845 - - - - 0.724 - -
55. murcb murcb 13655 1.567 0.702 - - - - - 0.865 - -
56. myhc4 ENSDARG00000035438 1322 1.567 - - - - - 0.715 0.852 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
57. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 1.566 0.797 - - - - - 0.769 - - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
58. hhip ENSDARG00000060397, ENSDARG00000111482, ENSDARG00000111668 3025 1.565 - - - - - 0.751 0.814 - - hedgehog interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4827]
59. mef2aa ENSDARG00000031756 2699 1.563 - 0.766 - - - - 0.797 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
60. col9a3 ENSDARG00000037845 6564 1.563 - - - - - 0.818 0.745 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
61. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.562 - 0.749 - - - - 0.813 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
62. smyd1a ENSDARG00000009280 1503 1.561 - - - 0.708 - - 0.853 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
63. epyc ENSDARG00000056950 7783 1.561 - - - - - 0.824 0.737 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
64. CABZ01044297.1 CABZ01044297.1 2015 1.561 - - - - - 0.838 0.723 - -
65. bag3 ENSDARG00000039486 1087 1.56 - 0.731 - - - 0.829 - - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
66. cfl2 ENSDARG00000014106 8051 1.559 - 0.765 - - - - 0.794 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
67. CU571169.1 ENSDARG00000100253 575 1.559 - - - - - 0.750 0.809 - -
68. prx ENSDARG00000017246 6183 1.559 - 0.728 - - - - 0.831 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
69. sb:cb54 sb:cb54 475 1.557 - 0.813 - - - 0.744 - - -
70. cyp1d1 ENSDARG00000035569 628 1.554 - - - - - 0.723 0.831 - - cytochrome P450, family 1, subfamily D, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041114-179]
71. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.553 0.711 - - - - - 0.842 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
72. BX842614.2 BX842614.2 799 1.55 - - - - - 0.767 0.783 - -
73. tppp3 ENSDARG00000030463 992 1.55 - - - - - 0.701 0.849 - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
74. EHBP1L1 EHBP1L1 2500 1.544 - 0.734 - - - - 0.810 - -
75. jph2 ENSDARG00000028625 6706 1.543 0.722 - - - - - 0.821 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
76. dhrs7c dhrs7c 1173 1.543 - 0.706 - - - - 0.837 - -
77. FILIP1 339 1.541 0.831 0.710 - - - - - - - filamin A interacting protein 1
78. hspg2 ENSDARG00000076564 3440 1.541 - 0.793 - - - - 0.748 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
79. notum2 ENSDARG00000088411 823 1.54 - 0.750 - - - 0.790 - - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
80. DUSP27 ENSDARG00000099889 1197 1.539 - 0.741 - - - - 0.798 - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
81. agla ENSDARG00000103811 2856 1.539 - - - - - 0.708 0.831 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
82. MYOM1 MYOM1 3870 1.536 - 0.742 - - - - 0.794 - -
83. stac3 ENSDARG00000098883 1765 1.536 - 0.766 - - - - 0.770 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
84. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 1.53 - 0.787 - - - - 0.743 - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
85. limch1a ENSDARG00000074275 2981 1.528 - - - - - 0.708 0.820 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
86. PAQR4 PAQR4 2150 1.528 - - - - - 0.758 0.770 - -
87. STIM2 STIM2 644 1.518 - - - - - 0.715 0.803 - -
88. fxr1 ENSDARG00000022968 2831 1.514 - - - - - 0.729 0.785 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
89. mmp23bb ENSDARG00000009825 133 1.513 - - - - - 0.804 0.709 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
90. rtn2a ENSDARG00000016088 12184 1.512 0.710 - - - - - 0.802 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
91. acana ENSDARG00000035891 118 1.507 - - - - - 0.761 0.746 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
92. PXN PXN 395 1.505 - 0.765 - - - - 0.740 - -
93. ntn1b ENSDARG00000022531 248 1.505 - 0.778 - - - 0.727 - - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
94. plcl1 ENSDARG00000067676 2457 1.505 - - - - - 0.714 0.791 - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
95. ube2d4 ENSDARG00000015057 1089 1.503 - 0.761 - - - - 0.742 - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
96. NRAP ENSDARG00000009341 3565 1.502 - 0.705 - - - - 0.797 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
97. cul2 ENSDARG00000013965 1407 1.499 0.706 - - - - - 0.793 - - cullin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8032]
98. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.495 - 0.722 - - - - 0.773 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
99. si:dkey-65j6.2 ENSDARG00000103586 533 1.493 - 0.719 - - - - 0.774 - - si:dkey-65j6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-319]
100. ckmt2 ckmt2 768 1.49 - - - - - 0.723 0.767 - -

There are 1228 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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