Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ctdspla

Gene Name Gene ID Reads Annotation
ctdspla ENSDARG00000071673 1447 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]










Genes with expression patterns similar to ctdspla

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ctdspla ENSDARG00000071673 1447 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
2. dnajc18 ENSDARG00000056005 8084 2.347 0.713 - - 0.796 - - - 0.838 - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
3. nudt3a ENSDARG00000016256 2713 1.979 - - - - 0.980 0.999 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
4. sdha ENSDARG00000016721 8255 1.927 - - - - 0.947 0.980 - - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
5. ppp1r7 ENSDARG00000009740 2606 1.92 - 0.967 - - 0.953 - - - - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
6. nrg2a ENSDARG00000077818 854 1.9 - - - - 0.992 - - 0.908 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
7. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.895 - - - - 0.924 0.971 - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
8. RNF111 ENSDARG00000078802 1357 1.885 - 0.895 - - 0.990 - - - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
9. ERO1LB ERO1LB 1433 1.876 - - - - 0.990 - - 0.886 -
10. smim7 ENSDARG00000074848 1260 1.87 - 0.878 - - 0.992 - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
11. VPS37B_1 VPS37B_1 1816 1.86 - - - 0.870 0.990 - - - -
12. timm10 ENSDARG00000069116 4459 1.857 - - - - 0.953 - - 0.904 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
13. myo5b ENSDARG00000062003 653 1.847 - 0.848 - - - 0.999 - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
14. wwp2 ENSDARG00000061345 3459 1.844 - 0.850 - - - 0.994 - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
15. nuf2 ENSDARG00000034624 2252 1.838 - 0.839 - - - 0.999 - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
16. ARID3A ENSDARG00000070843 1613 1.833 - 0.844 - - 0.989 - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
17. bbs4 ENSDARG00000063522 247 1.823 - 0.993 - 0.830 - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
18. tdrd3 ENSDARG00000025421 633 1.822 - 0.981 - 0.841 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
19. pik3c3 ENSDARG00000054829 559 1.815 - - - 0.879 - - - 0.936 - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
20. casp7 ENSDARG00000091836 657 1.815 - 0.988 - - - - - 0.827 - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
21. IDH2 ENSDARG00000003795 18659 1.805 - - - - 0.916 0.889 - - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
22. fam3c ENSDARG00000056152 3833 1.8 - - - 0.802 - 0.998 - - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
23. zcchc7 ENSDARG00000055443 2159 1.8 - - - - - 0.999 - 0.801 - zinc finger, CCHC domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030102-2]
24. znf710a ENSDARG00000014680 582 1.798 - 0.954 - 0.844 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
25. zdhhc6 ENSDARG00000075721 1494 1.792 - 0.974 - 0.818 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
26. tmem161b ENSDARG00000055989 680 1.789 - 0.903 - - - - - 0.886 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
27. s1pr2 ENSDARG00000036548 1109 1.785 - - - - - 0.999 - 0.786 - sphingosine-1-phosphate receptor 2 [Source:ZFIN;Acc:ZDB-GENE-020123-2]
28. pitpnaa ENSDARG00000039490 1096 1.78 - 0.850 - - - - - 0.930 - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
29. keap1b ENSDARG00000074634 1513 1.779 - - - - 0.980 - - 0.799 - kelch-like ECH-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-080508-1]
30. ube2g2 ENSDARG00000025404 1774 1.774 - 0.777 - - - 0.997 - - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
31. C20H6orf58_1 C20H6orf58_1 216 1.767 - 0.981 - - - - - 0.786 -
32. alpi.1 ENSDARG00000015273 1712 1.764 - 0.766 - - - 0.998 - - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
33. emc8 ENSDARG00000017093 1947 1.753 - - - 0.755 - 0.998 - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
34. NTAN1 ENSDARG00000105182 844 1.75 - 0.972 - - - - - 0.778 - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
35. endog ENSDARG00000058865 679 1.749 - 0.944 - - - - - 0.805 - endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
36. pds5b ENSDARG00000098897 1732 1.748 - - - - 0.982 - - 0.766 - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
37. si:ch73-387e10.3 si:ch73-387e10.3 517 1.745 - - - 0.833 - - - 0.912 -
38. epb41l4a ENSDARG00000040087 1013 1.745 - 0.989 - 0.756 - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
39. ppargc1b ENSDARG00000101569 3452 1.739 - - - 0.744 - 0.995 - - - peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
40. PARD3B PARD3B 401 1.733 - 0.911 - 0.822 - - - - -
41. GRK6 ENSDARG00000032157 1136 1.721 - 0.723 - - - 0.998 - - - G protein-coupled receptor kinase 6 [Source:ZFIN;Acc:ZDB-GENE-101006-5]
42. snx1a ENSDARG00000071031 3975 1.721 - 0.740 - - 0.981 - - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
43. prdm10 ENSDARG00000104251 510 1.719 - 0.961 0.758 - - - - - - PR domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050419-74]
44. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 1.719 0.733 - - - 0.986 - - - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
45. TNFRSF14_3 TNFRSF14_3 135 1.714 - 0.982 - - - - 0.732 - -
46. sart3 ENSDARG00000008032 2594 1.712 - - - 0.713 - 0.999 - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
47. cdkn2c ENSDARG00000057610 179 1.709 - 0.985 0.724 - - - - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
48. ndufaf4 ENSDARG00000077859 552 1.709 - - - 0.830 - - - 0.879 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
49. nudcd2 ENSDARG00000078059, ENSDARG00000109490 2234 1.7 - 0.701 - - - 0.999 - - - NudC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-49]
50. tpt1 ENSDARG00000092693 1110 1.7 - - - 0.710 0.990 - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
51. wsb1 ENSDARG00000021343 3828 1.699 - - - - 0.947 - 0.752 - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
52. maf1 ENSDARG00000013122 3365 1.692 - - - 0.716 0.976 - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
53. denr ENSDARG00000037229 8370 1.691 - - - - 0.916 - 0.775 - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
54. rac3b ENSDARG00000020795 1523 1.689 - 0.973 - 0.716 - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
55. fkbp3 ENSDARG00000098059 5428 1.682 - - - - 0.930 - 0.752 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
56. WDR61 ENSDARG00000007755 2827 1.677 - - - - 0.971 - 0.706 - - WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
57. ash2l ENSDARG00000060392 4916 1.672 - - - - 0.956 - 0.716 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
58. zgc:174688 zgc:174688 170 1.67 - - 0.732 - - - - 0.938 -
59. RBM26 ENSDARG00000104130 1012 1.661 - - - 0.750 - - - 0.911 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
60. klf15 ENSDARG00000091127 1037 1.66 - 0.868 - - - - - 0.792 - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
61. pex16 ENSDARG00000058202 486 1.659 - - - 0.730 - - - 0.929 - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
62. lrrfip2 ENSDARG00000010400 2633 1.657 - 0.855 - 0.802 - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
63. zdhhc17 ENSDARG00000070441 1073 1.653 - 0.794 - 0.859 - - - - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
64. cxxc1 cxxc1 914 1.648 - 0.897 - 0.751 - - - - -
65. ugt5b2 ENSDARG00000101495 512 1.647 - 0.877 - - - - - 0.770 - UDP glucuronosyltransferase 5 family, polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-100406-4]
66. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 1.647 - 0.933 - 0.714 - - - - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
67. fam172a ENSDARG00000052697 422 1.646 - - - 0.812 - - - 0.834 - family with sequence similarity 172, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1396]
68. herpud1 ENSDARG00000024314 1207 1.646 - 0.821 - - 0.825 - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
69. ddx56 ENSDARG00000020913 1070 1.639 - 0.752 - - - - - 0.887 - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
70. fibina ENSDARG00000039949 533 1.634 - 0.888 - - - - - 0.746 - fin bud initiation factor a [Source:ZFIN;Acc:ZDB-GENE-111031-2]
71. Sep-02 Sep-02 10074 1.62 - - - - 0.918 - 0.702 - -
72. CR548630.1 CR548630.1 3301 1.619 - 0.868 - 0.751 - - - - -
73. ANK1_1 ANK1_1 507 1.602 - - - 0.814 - - - 0.788 -
74. med19b ENSDARG00000009472 936 1.601 - - - 0.848 - - - 0.753 - mediator complex subunit 19b [Source:ZFIN;Acc:ZDB-GENE-040727-4]
75. rprd2b ENSDARG00000074676 809 1.6 - - - 0.761 - - - 0.839 - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
76. trappc5 ENSDARG00000026068 1350 1.584 - - - 0.717 - - - 0.867 - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
77. C22H6orf89 C22H6orf89 1076 1.583 - 0.759 - - - - - 0.824 -
78. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.579 - 0.843 - - - - 0.736 - - VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
79. pnkd ENSDARG00000071032 447 1.577 - - - 0.734 - - - 0.843 - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
80. snai1a ENSDARG00000056995 1427 1.572 - 0.848 - 0.724 - - - - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
81. lrig1 ENSDARG00000075625 2027 1.57 - 0.802 - 0.768 - - - - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
82. snrka ENSDARG00000070832 1366 1.565 - 0.852 - - - - - 0.713 - SNF related kinase a [Source:ZFIN;Acc:ZDB-GENE-040718-84]
83. vps39 ENSDARG00000074471 684 1.563 - 0.757 - 0.806 - - - - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
84. nr4a2b ENSDARG00000044532 103 1.559 - - - 0.839 - - 0.720 - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
85. rnf220a ENSDARG00000060929 693 1.558 - - - 0.759 - - - 0.799 - ring finger protein 220a [Source:ZFIN;Acc:ZDB-GENE-060929-1006]
86. ppig ENSDARG00000044431 3427 1.555 - - - 0.826 - - 0.729 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
87. nat15 ENSDARG00000061185 396 1.551 - 0.745 - 0.806 - - - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
88. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.546 - - - 0.839 - - 0.707 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
89. cox7a3 20842 1.545 - - - - 0.734 0.811 - - - cytochrome c oxidase subunit VIIa polypeptide 3
90. atp6ap1a ENSDARG00000041417 898 1.544 - - - 0.773 - - - 0.771 - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
91. pcdh10a ENSDARG00000099729 2214 1.524 - 0.785 - - - - - 0.739 - protocadherin 10a [Source:ZFIN;Acc:ZDB-GENE-020731-1]
92. si:ch211-241b2.1 ENSDARG00000102950 526 1.519 - 0.748 - - - - - 0.771 - si:ch211-241b2.1 [Source:ZFIN;Acc:ZDB-GENE-070705-131]
93. irf2bp2b ENSDARG00000098635 1961 1.513 - 0.710 - 0.803 - - - - - interferon regulatory factor 2 binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2574]
94. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.502 - 0.798 0.704 - - - - - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
95. prkcbp1l ENSDARG00000011932 2714 1.5 - - - 0.753 - - 0.747 - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
96. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.499 - - - 0.755 - - - 0.744 - membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
97. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 1.498 - 0.778 0.720 - - - - - - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
98. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 1.496 - 0.745 - 0.751 - - - - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
99. CABZ01080590.2 CABZ01080590.2 2038 1.482 - 0.717 - - - - - 0.765 -
100. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.481 - 0.723 - 0.758 - - - - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]

There are 1568 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA