Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ctdspl2b

Gene Name Gene ID Reads Annotation
ctdspl2b ENSDARG00000060586 1682 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]










Genes with expression patterns similar to ctdspl2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ctdspl2b ENSDARG00000060586 1682 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
2. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 2.426 0.761 - - - 0.932 0.733 - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
3. GRAMD4 GRAMD4 1967 1.798 - - - - 0.977 - 0.821 - -
4. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.784 - - - - 0.982 - - 0.802 - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
5. usp16 ENSDARG00000060633 684 1.775 0.797 - - - 0.978 - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
6. bloc1s3 ENSDARG00000068828 502 1.76 - - - - 0.973 0.787 - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
7. dnajc15 ENSDARG00000038309 1274 1.751 0.782 - - - 0.969 - - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
8. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.724 - - - - 0.980 0.744 - - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
9. hccs hccs 1758 1.722 0.755 - - - 0.967 - - - -
10. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.722 - - - - 0.964 0.758 - - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
11. smurf1 ENSDARG00000016086 878 1.713 - 0.733 - - 0.980 - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
12. ercc6 ENSDARG00000075612 1175 1.703 - - - - 0.980 - 0.723 - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
13. brms1la ENSDARG00000006235 2011 1.702 - 0.729 - - 0.973 - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
14. zic5 ENSDARG00000016022 1034 1.699 - - - - 0.982 0.717 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
15. ccdc28b ENSDARG00000011222 528 1.692 - - - - 0.981 0.711 - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
16. rfc1 ENSDARG00000054799 1416 1.689 - - - - 0.978 - 0.711 - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
17. marcksa ENSDARG00000004049 2518 1.677 - - - - 0.956 - - - 0.721 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
18. vbp1 ENSDARG00000030241 10619 1.671 0.715 - - - 0.956 - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
19. ebna1bp2 ENSDARG00000054980 4621 1.664 - - - - 0.919 - - - 0.745 EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
20. ing5b ENSDARG00000068175 2502 1.659 0.700 - - - 0.959 - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
21. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.657 - - - - 0.876 - 0.781 - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
22. igf2bp3 ENSDARG00000010266 5789 1.606 0.702 - - - 0.904 - - - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
23. grpel2 ENSDARG00000069421 5673 1.603 0.772 0.831 - - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
24. nde1 ENSDARG00000103902 557 1.596 - 0.778 - - - 0.818 - - - nudE neurodevelopment protein 1 [Source:ZFIN;Acc:ZDB-GENE-050913-61]
25. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.588 0.739 - - - 0.849 - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
26. ssbp1 ENSDARG00000039350 809 1.569 0.842 - - - - - 0.727 - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
27. KLHL7 ENSDARG00000101445 684 1.554 - - - - - 0.830 0.724 - - kelch-like family member 7 [Source:ZFIN;Acc:ZDB-GENE-130212-1]
28. BX323051.1 ENSDARG00000099065 1758 1.537 0.707 0.830 - - - - - - -
29. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.537 0.707 - - - - - 0.830 - - si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
30. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.535 - - - - 0.832 - - - 0.703 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
31. PPIP5K1 PPIP5K1 997 1.53 0.830 0.700 - - - - - - -
32. maml3 ENSDARG00000079552 357 1.526 0.741 - - - - 0.785 - - - mastermind-like transcriptional coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-292]
33. tcea3 ENSDARG00000004724 674 1.521 0.705 - - - - - 0.816 - - transcription elongation factor A (SII), 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1860]
34. kdm5bb ENSDARG00000003098 531 1.518 - 0.804 - - - - 0.714 - - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
35. hdgfrp2 7462 1.516 0.796 - - - - 0.720 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
36. cap2 ENSDARG00000104478 3266 1.513 0.718 0.795 - - - - - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
37. uevld ENSDARG00000009266, ENSDARG00000116754 377 1.513 - - - - - 0.763 0.750 - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
38. bmp1a ENSDARG00000028071 583 1.507 - 0.768 - 0.739 - - - - - bone morphogenetic protein 1a [Source:ZFIN;Acc:ZDB-GENE-060818-1]
39. ephb3a ENSDARG00000031548 1872 1.505 - 0.788 - - 0.717 - - - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
40. gnb2l1 61553 1.502 0.730 - - - 0.772 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
41. obsl1a ENSDARG00000003684 1288 1.499 0.706 0.793 - - - - - - - obscurin-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-649]
42. iars ENSDARG00000007955 1363 1.495 0.747 - - - 0.748 - - - - isoleucyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-6325]
43. fam46c 1913 1.492 0.749 - - - - - 0.743 - - family with sequence similarity 46, member C
44. si:ch211-39k3.2 ENSDARG00000075881 531 1.487 - 0.727 - - - 0.760 - - - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
45. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 1.475 - - - - - 0.741 0.734 - - RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
46. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.472 0.771 - - - - - 0.701 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
47. cuedc1b ENSDARG00000054748 1638 1.47 0.707 0.763 - - - - - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
48. si:ch211-242b18.1 ENSDARG00000054723 2929 1.465 0.730 0.735 - - - - - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
49. pip5k1ab ENSDARG00000024642 1988 1.449 0.730 - - - - - 0.719 - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
50. nom1 ENSDARG00000060027, ENSDARG00000112720 831 1.445 - 0.701 - - - - 0.744 - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
51. rcc1 ENSDARG00000037158 1165 1.443 - 0.735 - - - - 0.708 - - regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
52. zgc:112038 ENSDARG00000046140 73 1.441 - 0.707 - - - - 0.734 - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
53. CABZ01061567.1 CABZ01061567.1 295 1.428 - 0.705 - - - 0.723 - - -
54. MZT1 ENSDARG00000096668 2514 1.415 0.709 - - - - - - 0.706 - mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
55. odz4 odz4 822 0.987 - - - - 0.987 - - - -
56. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.987 - - - - 0.987 - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
57. FP245444.1 FP245444.1 1922 0.985 - - - - 0.985 - - - -
58. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 0.985 - - - - 0.985 - - - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
59. cenpe ENSDARG00000063385 4428 0.984 - - - - 0.984 - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
60. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.984 - - - - 0.984 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
61. sulf2 sulf2 1286 0.984 - - - - 0.984 - - - -
62. larp7 ENSDARG00000017315 1194 0.984 - - - - 0.984 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
63. sin3b ENSDARG00000062472 2025 0.983 - - - - 0.983 - - - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
64. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 0.983 - - - - 0.983 - - - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
65. pias4a ENSDARG00000007081 4264 0.983 - - - - 0.983 - - - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
66. lgi1a ENSDARG00000020493 1218 0.982 - - - - 0.982 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
67. casc5 1487 0.981 - - - - 0.981 - - - - cancer susceptibility candidate 5, transcript variant X3
68. msxe msxe 362 0.981 - - - - 0.981 - - - -
69. lmf2b ENSDARG00000025859, ENSDARG00000115591 2671 0.981 - - - - 0.981 - - - - lipase maturation factor 2b [Source:ZFIN;Acc:ZDB-GENE-070206-11]
70. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 0.981 - - - - 0.981 - - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
71. ccr10 ENSDARG00000040643 255 0.981 - - - - 0.981 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
72. ppp4ca ENSDARG00000070570 8395 0.981 - - - - 0.981 - - - - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
73. atxn7l3 ENSDARG00000029331 531 0.981 - - - - 0.981 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
74. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 0.981 - - - - 0.981 - - - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
75. med13b ENSDARG00000003910 1143 0.981 - - - - 0.981 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
76. prdm16 prdm16 1346 0.981 - - - - 0.981 - - - -
77. FOXL2 239 0.981 - - - - 0.981 - - - - forkhead box L2, transcript variant X1
78. tab1 ENSDARG00000036613 445 0.98 - - - - 0.980 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
79. FBXO33 ENSDARG00000075400 1164 0.98 - - - - 0.980 - - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
80. srgap1 srgap1 2320 0.98 - - - - 0.980 - - - -
81. dvl3a ENSDARG00000015707 1132 0.98 - - - - 0.980 - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
82. spag7 ENSDARG00000011555 3224 0.98 - - - - 0.980 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
83. cuedc2 ENSDARG00000039365 484 0.98 - - - - 0.980 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
84. exoc3l4 ENSDARG00000058180 923 0.98 - - - - 0.980 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
85. gorab ENSDARG00000042031 483 0.98 - - - - 0.980 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
86. aspg ENSDARG00000052942 1406 0.98 - - - - 0.980 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
87. dopey1 438 0.979 - - - - 0.979 - - - - dopey family member 1, transcript variant X4
88. pfkpb ENSDARG00000012801 223 0.979 - - - - 0.979 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
89. fam193b ENSDARG00000102831 442 0.979 - - - - 0.979 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
90. BX005008.2 BX005008.2 708 0.979 - - - - 0.979 - - - -
91. C24H17orf96 C24H17orf96 1538 0.979 - - - - 0.979 - - - -
92. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 0.979 - - - - 0.979 - - - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
93. slc2a15b ENSDARG00000053269 899 0.979 - - - - 0.979 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
94. fut8 fut8 652 0.979 - - - - 0.979 - - - -
95. si:dkey-20j1.4 si:dkey-20j1.4 406 0.979 - - - - 0.979 - - - -
96. CR759921.2 CR759921.2 583 0.979 - - - - 0.979 - - - -
97. SENP1 SENP1 1122 0.978 - - - - 0.978 - - - -
98. katnbl1 ENSDARG00000042522 1086 0.978 - - - - 0.978 - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
99. tbl1x ENSDARG00000060438 1386 0.978 - - - - 0.978 - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
100. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.978 - - - - 0.978 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]

There are 1338 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA