Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ctdnep1b

Gene Name Gene ID Reads Annotation
ctdnep1b ENSDARG00000035781 65 CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]










Genes with expression patterns similar to ctdnep1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ctdnep1b ENSDARG00000035781 65 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
2. slc7a10b ENSDARG00000051730 44 1.879 - - - - - 1.000 - 0.879 - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
3. MFAP4_6 MFAP4_6 162 1.823 0.823 - - - - 1.000 - - -
4. C13H2orf50 C13H2orf50 87 1.797 0.918 - - - - 0.879 - - -
5. tmem44 ENSDARG00000068193 8 1.721 - - - - - 1.000 - 0.721 - transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
6. CABZ01114089.1 CABZ01114089.1 127 1.669 - 0.897 - - 0.772 - - - -
7. tgfbr1b ENSDARG00000042259 219 1.652 - - - - - 0.896 0.756 - - transforming growth factor, beta receptor 1 b [Source:ZFIN;Acc:ZDB-GENE-091027-1]
8. zgc:153738 ENSDARG00000069230 84 1.606 0.838 - - - - - 0.768 - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
9. coil ENSDARG00000040070 863 1.574 - 0.776 - - - - 0.798 - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
10. CU571310.1 ENSDARG00000102580 53 1 - - - - - 1.000 - - - ras-related protein Rab-39A-like [Source:NCBI gene;Acc:100330257]
11. si:dkey-220o21.2 si:dkey-220o21.2 19 1 - - - - - 1.000 - - -
12. pcdh2aa3 0 1 - - - - - 1.000 - - - protocadherin 2 alpha a 3
13. rhot1b ENSDARG00000103313, ENSDARG00000109702, ENSDARG00000114871 44 1 - - - - - 1.000 - - - ras homolog family member T1 [Source:ZFIN;Acc:ZDB-GENE-061009-52]
14. gng8 ENSDARG00000042970 117 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
15. CR388132.1 ENSDARG00000097728 61 1 - - - - - 1.000 - - -
16. lonrf1 ENSDARG00000075048 13 1 - - - - - 1.000 - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
17. fabp10a ENSDARG00000038439 4 1 - - - - - 1.000 - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
18. isg15 ENSDARG00000086374 8 1 - - - - - 1.000 - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
19. tlr20al tlr20al 0 1 - - - - - 1.000 - - -
20. KBTBD13 ENSDARG00000076449 10 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
21. ppm1na ENSDARG00000010231 3 1 - - - - - 1.000 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
22. si:ch73-249k16.1 si:ch73-249k16.1 36 1 - - - - - 1.000 - - -
23. snx24 ENSDARG00000053527 31 1 - - - - - 1.000 - - - sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
24. CHD6 ENSDARG00000017244 219 1 - - - - - 1.000 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
25. SNORD88 SNORD88 232 1 - - - - - 1.000 - - -
26. si:ch211-244b2.4 ENSDARG00000045530 32 1 - - - - - 1.000 - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
27. CABZ01055869.1 CABZ01055869.1 2 1 - - - - - 1.000 - - -
28. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - 1.000 - - - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
29. FAM188B2 4 1 - - - - - 1.000 - - - family with sequence similarity 188, member B2
30. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - 1.000 - - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
31. slc35f3a ENSDARG00000075909 1 1 - - - - - 1.000 - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
32. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - 1.000 - - - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
33. hapln4 ENSDARG00000018542 10 1 - - - - - 1.000 - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
34. clcn2 clcn2 13 1 - - - - - 1.000 - - -
35. cga ENSDARG00000040479 3 1 - - - - - 1.000 - - - glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
36. ZBED1 ZBED1 2 1 - - - - - 1.000 - - -
37. si:dkeyp-27b10.1 si:dkeyp-27b10.1 9 1 - - - - - 1.000 - - -
38. EPHB1 ENSDARG00000076757 20 1 - - - - - 1.000 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
39. top3b ENSDARG00000027586 8 1 - - - - - 1.000 - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
40. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1 - - - - - 1.000 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
41. CABZ01041769.3 CABZ01041769.3 5 1 - - - - - 1.000 - - -
42. si:ch211-220b11.4 si:ch211-220b11.4 8 1 - - - - - 1.000 - - -
43. si:ch211-76l23.4 ENSDARG00000096242 202 1 - - - - - 1.000 - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
44. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1 - - - - - 1.000 - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
45. si:dkey-22i16.9 ENSDARG00000095949 16 1 - - - - - 1.000 - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
46. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1 - - - - - 1.000 - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
47. CENPA 63 1 - - - - - 1.000 - - - histone H3-like centromeric protein A
48. ppp1r3db ENSDARG00000076248 32 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
49. zgc:158260_1 ENSDARG00000101703 0 1 - - - - - 1.000 - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
50. SLC4A8 ENSDARG00000015531 16 1 - - - - - 1.000 - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
51. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - - - - 1.000 - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
52. DEF6 DEF6 19 1 - - - - - 1.000 - - -
53. si:dkey-4e4.1 ENSDARG00000096026, ENSDARG00000109251 48 1 - - - - - 1.000 - - - si:dkey-4e4.1 [Source:ZFIN;Acc:ZDB-GENE-110914-73]
54. CR855327.1 CR855327.1 6 1 - - - - - 1.000 - - -
55. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - 1.000 - - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
56. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
57. usp46 ENSDARG00000045343 65 1 - - - - - 1.000 - - - ubiquitin specific peptidase 46 [Source:ZFIN;Acc:ZDB-GENE-070705-213]
58. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - - - - - 1.000 - - -
59. SLC16A1 SLC16A1 37 1 - - - - - 1.000 - - -
60. dzank1 ENSDARG00000055787, ENSDARG00000111473 26 1 - - - - - 1.000 - - - double zinc ribbon and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-051113-296]
61. TMBIM1 TMBIM1 2 1 - - - - - 1.000 - - -
62. wdr27 ENSDARG00000053386 2 1 - - - - - 1.000 - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
63. CABZ01070637.1 CABZ01070637.1 1 1 - - - - - 1.000 - - -
64. cplx3a ENSDARG00000062508, ENSDARG00000099196, ENSDARG00000112735 58 1 - - - - - 1.000 - - - complexin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-349]
65. EGFLAM 0 1 - - - - - 1.000 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X2
66. CU183952.2 CU183952.2 6 1 - - - - - 1.000 - - -
67. SRCRB4D SRCRB4D 4 1 - - - - - 1.000 - - -
68. adipoqb ENSDARG00000100086 5 1 - - - - - 1.000 - - - adiponectin, C1Q and collagen domain containing, b [Source:ZFIN;Acc:ZDB-GENE-060825-220]
69. CACNA2D1 ENSDARG00000073752 6 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
70. si:dkey-88n24.8 ENSDARG00000091095 9 1 - - - - - 1.000 - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
71. si:ch211-10j20.1 si:ch211-10j20.1 24 1 - - - - - 1.000 - - -
72. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1 - - - - - 1.000 - - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
73. dab1a ENSDARG00000059939 46 1 - - - - - - 1.000 - - Dab, reelin signal transducer, homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060528-1]
74. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1 - - - - - 1.000 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
75. PRKD2_1 PRKD2_1 1 1 - - - - - 1.000 - - -
76. tmem86a ENSDARG00000044034 1 1 - - - - - 1.000 - - - transmembrane protein 86A [Source:ZFIN;Acc:ZDB-GENE-050320-81]
77. EFEMP1_1 EFEMP1_1 8 1 - - - - - 1.000 - - -
78. CCDC88A_1 CCDC88A_1 12 1 - - - - - 1.000 - - -
79. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - - - - - 1.000 - - -
80. CR533575.1 CR533575.1 0 1 - - - - - 1.000 - - -
81. GSTK1_2 GSTK1_2 8 1 - - - - - 1.000 - - -
82. CCL19 CCL19 6 1 - - - - - 1.000 - - -
83. CCDC180 ENSDARG00000032372 21 1 - - - - - 1.000 - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
84. tmem64 ENSDARG00000061723, ENSDARG00000113304 62 1 - - - - - 1.000 - - - transmembrane protein 64 [Source:ZFIN;Acc:ZDB-GENE-060503-182]
85. VASH1 ENSDARG00000092716 33 1 - - - - - 1.000 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
86. TMEM55B TMEM55B 76 1 - - - - - 1.000 - - -
87. rnasel2 ENSDARG00000043196 0 1 - - - - - 1.000 - - - ribonuclease like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-420]
88. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - 1.000 - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
89. si:dkey-219e20.3 si:dkey-219e20.3 1 1 - - - - - 1.000 - - -
90. CABZ01054391.1 ENSDARG00000103952 2 1 - - - - - 1.000 - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
91. CU570981.1 CU570981.1 9 1 - - - - - 1.000 - - -
92. si:dkey-57l19.1 ENSDARG00000098143 1 1 - - - - - 1.000 - - - si:dkey-57l19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-171]
93. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - - - - - 1.000 - - -
94. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - 1.000 - - -
95. CU041398.1 CU041398.1 17 1 - - - - - 1.000 - - -
96. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - - - 1.000 - - -
97. si:ch211-274k16.9 ENSDARG00000095918 1 1 - - - - - 1.000 - - - si:ch211-274k16.9 [Source:ZFIN;Acc:ZDB-GENE-110408-30]
98. zgc:174704 10 1 - - - - - 1.000 - - - zgc:174704, transcript variant X2
99. AL935186.3 ENSDARG00000109223 19 1 - - - - - 1.000 - - -
100. chst2b ENSDARG00000058585 33 1 - - - - - 1.000 - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]

There are 838 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA