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Results for cstf3

Gene Name Gene ID Reads Annotation
cstf3 ENSDARG00000018904 6111 cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]










Genes with expression patterns similar to cstf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cstf3 ENSDARG00000018904 6111 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
2. dhx15 ENSDARG00000015392 7496 2.899 - 0.992 0.945 - - - 0.962 - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
3. id2a ENSDARG00000055283 7428 2.697 - 0.942 - - - - 0.970 - 0.785 inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
4. CWC15 ENSDARG00000013382 8969 2.696 - - - - 0.830 - 0.965 - 0.901 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
5. arih2 ENSDARG00000012848 7087 2.63 - 0.991 0.903 - - 0.736 - - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
6. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.624 - 0.977 0.896 - 0.751 - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
7. nme3 ENSDARG00000100990 3889 2.618 0.729 0.990 - - - - - - 0.899 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
8. cdca7a ENSDARG00000077620 9345 2.547 - - - - - 0.760 0.954 - 0.833 cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
9. cdc14b ENSDARG00000021483 4958 2.497 - - 0.916 - 0.860 0.721 - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
10. tomm7 ENSDARG00000067717 4452 1.956 - 0.991 - - - - 0.965 - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
11. gtpbp4 ENSDARG00000018961 5323 1.901 - 0.931 - - 0.970 - - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
12. snrpa1 ENSDARG00000024651 3306 1.893 - 0.997 - - - - - - 0.896 small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
13. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.875 - 0.993 - - - - - - 0.882 v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
14. cnbpa ENSDARG00000045776 8648 1.861 - 0.937 - - - - 0.924 - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
15. CR387996.1 ENSDARG00000097774 3037 1.861 - 0.995 - - 0.866 - - - -
16. rhoaa ENSDARG00000026845 6900 1.847 - - - - 0.953 - 0.894 - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
17. abl1 ENSDARG00000035187 3553 1.843 - 0.996 - - 0.847 - - - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
18. CORO1C CORO1C 5554 1.838 - - - - 0.850 - 0.988 - -
19. nrf1 ENSDARG00000000018 4683 1.835 - - - - 0.862 - 0.973 - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
20. snx12 ENSDARG00000019060 9563 1.834 - 0.989 - - 0.845 - - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
21. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 1.834 - - - - 0.865 - 0.969 - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
22. kif11 ENSDARG00000010948 4973 1.831 - - - - 0.840 - 0.991 - - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
23. kmt2bb ENSDARG00000060697 5230 1.818 - - - - - 0.832 0.986 - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
24. lrp1b lrp1b 3216 1.813 - - - - 0.859 - 0.954 - -
25. nhp2l1b nhp2l1b 3898 1.813 - 0.992 - - 0.821 - - - -
26. ing2 ENSDARG00000104907 1336 1.798 - 0.996 - - - - - - 0.802 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
27. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.777 - - - - 0.961 0.816 - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
28. mbnl2 ENSDARG00000018460 3328 1.771 - - - - - - 0.974 - 0.797 muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
29. cbsb ENSDARG00000010946 5779 1.766 - 0.825 - - - - 0.941 - - cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
30. RAPGEF2 ENSDARG00000005482 2068 1.762 - - - 0.790 - - 0.972 - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
31. ccdc22 ENSDARG00000052379 2276 1.759 - - - 0.792 - - 0.967 - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
32. si:ch73-18b11.1 si:ch73-18b11.1 3840 1.753 - - - - 0.779 - 0.974 - -
33. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.748 - - 0.984 - - - 0.764 - - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
34. atp2a3 ENSDARG00000060978 1408 1.746 - - - - - - 0.960 - 0.786 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
35. klc2 3058 1.741 - - - - 0.857 - - - 0.884 kinesin light chain 2
36. mllt10 ENSDARG00000045401 7557 1.732 - - 0.956 0.776 - - - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
37. mbd3a ENSDARG00000061774 4047 1.725 - - - - - 0.753 0.972 - - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
38. xpo1b ENSDARG00000063229 2529 1.723 - - - - - 0.751 0.972 - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
39. lrba ENSDARG00000031108 2136 1.72 - - - - - - 0.947 - 0.773 LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
40. lsm4 ENSDARG00000023852 6083 1.719 - - - - - 0.743 0.976 - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
41. sort1b ENSDARG00000056252 2652 1.718 - 0.984 - - - - - - 0.734 sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
42. myh10 ENSDARG00000000103 7522 1.712 - 0.994 - - - 0.718 - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
43. gapdhs ENSDARG00000039914 8760 1.706 - - - - 0.750 - 0.956 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
44. daam1a ENSDARG00000015059 1460 1.705 - - - - - - 0.913 - 0.792 dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
45. atp5f1 16797 1.699 - 0.980 0.719 - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
46. skp1 ENSDARG00000003151 8172 1.694 - - - - - 0.733 0.961 - - S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
47. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.681 - - - 0.786 - - 0.895 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
48. got2b ENSDARG00000005840 7891 1.669 - - - - 0.958 - 0.711 - - glutamic-oxaloacetic transaminase 2b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7917]
49. acap3a ENSDARG00000075990 9652 1.668 - - 0.915 - - 0.753 - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
50. prpf8 ENSDARG00000026180 7026 1.665 - - - - - 0.718 0.947 - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
51. anxa4 ENSDARG00000036456 3332 1.66 - - - - - - 0.915 - 0.745 annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
52. bc2 5213 1.657 - - - - - - 0.918 - 0.739 putative breast adenocarcinoma marker
53. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.644 - - - - - 0.777 - - 0.867 proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
54. marveld1 ENSDARG00000011724 1025 1.628 - - - - 0.860 - - - 0.768 MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
55. met ENSDARG00000070903 2088 1.628 0.719 - - - - - 0.909 - - MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
56. zgc:113333 ENSDARG00000038242 797 1.623 - - - - 0.861 - - - 0.762 zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
57. ccnd1 ENSDARG00000101637 34762 1.619 - 0.785 - - - - 0.834 - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
58. snrnp70 ENSDARG00000077126 5921 1.618 - - - - 0.864 0.754 - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
59. SH3BGRL ENSDARG00000058302 4525 1.617 - - - 0.782 0.835 - - - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
60. actr1 ENSDARG00000011611 3879 1.613 - - - - - 0.717 - - 0.896 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
61. dap3 ENSDARG00000078500 2724 1.613 - 0.906 - - - 0.707 - - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
62. eif3g ENSDARG00000016889 10367 1.607 - - - - - 0.731 - - 0.876 eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
63. rab5aa ENSDARG00000018602 8947 1.605 - - - - 0.900 - - - 0.705 RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
64. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.6 - - - - - 0.720 0.880 - - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
65. stmn1a ENSDARG00000004169 21169 1.598 - - - 0.738 0.860 - - - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
66. ppp5c ENSDARG00000034313 8794 1.598 - - - - - - 0.775 - 0.823 protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
67. rsl24d1 ENSDARG00000040439 13537 1.598 - 0.869 - - - - - - 0.729 ribosomal L24 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1925]
68. rpl38 ENSDARG00000006413 59590 1.596 - 0.800 - 0.796 - - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
69. supt16h ENSDARG00000079949 4755 1.591 - - - 0.774 0.817 - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
70. paip2b ENSDARG00000008706 4255 1.588 0.812 - - 0.776 - - - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
71. tceb2 10382 1.567 - - - - - - 0.774 - 0.793 transcription elongation factor B (SIII), polypeptide 2
72. smc1al ENSDARG00000058203 8838 1.562 - - - - 0.802 0.760 - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
73. akirin2 ENSDARG00000058729 13245 1.558 0.798 - - - - 0.760 - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
74. CPAMD8 ENSDARG00000056530 3481 1.557 0.799 - - - - - - - 0.758 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
75. zgc:77439 ENSDARG00000039211 1492 1.556 0.714 - - - - - 0.842 - - zgc:77439 [Source:ZFIN;Acc:ZDB-GENE-031010-24]
76. zgc:194839 ENSDARG00000078550 4003 1.55 - - - - - - 0.787 - 0.763 zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
77. eif4a3 ENSDARG00000102978 16162 1.55 - - - - - 0.752 0.798 - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
78. elavl1 11672 1.549 - - - 0.738 - - - - 0.811 ELAV like RNA binding protein 1, transcript variant X3
79. atpif1a 6030 1.548 - - - - 0.835 0.713 - - - ATPase inhibitory factor 1a
80. creb1a ENSDARG00000053586 5068 1.542 - - - 0.791 - 0.751 - - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
81. ndfip2 ENSDARG00000033928 3129 1.54 - - - - 0.832 0.708 - - - Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
82. ccng2 ENSDARG00000017602 3141 1.536 0.703 - - - - - - - 0.833 cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
83. znf185 ENSDARG00000103917 7195 1.534 - - 0.714 - - - 0.820 - - zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
84. sub1a ENSDARG00000053446 13383 1.531 - 0.808 - 0.723 - - - - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
85. hnrnpa0a ENSDARG00000089302 45675 1.518 - 0.749 - - - - 0.769 - - heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
86. coro1ca ENSDARG00000035598 9278 1.515 0.764 - - - - - - - 0.751 coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
87. yy1b ENSDARG00000027978 2669 1.515 - 0.702 - - - - - - 0.813 YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
88. EIF4G1 EIF4G1 19676 1.507 - - - - - 0.701 0.806 - -
89. fam89a ENSDARG00000079979 4375 1.496 0.751 - - - - - - - 0.745 family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
90. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.494 - - - 0.777 - 0.717 - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
91. SERBP1 SERBP1 9276 1.481 - - - - - 0.724 - - 0.757
92. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.479 - - - 0.772 - 0.707 - - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
93. ddx19 ENSDARG00000005699 4602 1.472 - - - - - 0.720 - 0.752 - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
94. lsm7 ENSDARG00000058328 7191 1.467 0.761 - - - 0.706 - - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
95. C6H6orf106 C6H6orf106 2940 1.458 0.702 - - - - 0.756 - - -
96. srp14 ENSDARG00000115987 3575 1.438 0.706 - - - - 0.732 - - - signal recognition particle 14 [Source:ZFIN;Acc:ZDB-GENE-050913-131]
97. mrpl13 ENSDARG00000056903 2768 0.997 - 0.997 - - - - - - - mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
98. C20H12orf57 C20H12orf57 3325 0.997 - 0.997 - - - - - - -
99. sdad1 ENSDARG00000105117 2819 0.996 - 0.996 - - - - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
100. utp23 ENSDARG00000105012 1346 0.996 - 0.996 - - - - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]

There are 1042 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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