Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cstf2_1

Gene Name Gene ID Reads Annotation
cstf2_1 ENSDARG00000090788 709 cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]










Genes with expression patterns similar to cstf2_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cstf2_1 ENSDARG00000090788 709 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]
2. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 2.179 - - 0.741 - - 0.720 - 0.718 - activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
3. rybpb ENSDARG00000053459 1464 1.671 - - - 0.767 - - - - 0.904 RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
4. atrip ENSDARG00000063076 385 1.669 - - - 0.724 - - - - 0.945 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
5. prkcbb ENSDARG00000022254 319 1.664 - 0.730 - - - - - - 0.934 protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
6. PACS1 PACS1 2061 1.657 - 0.778 - - - - - - 0.879
7. yrk ENSDARG00000004378 618 1.645 - 0.747 - - - - - - 0.898 Yes-related kinase [Source:ZFIN;Acc:ZDB-GENE-030131-9517]
8. galnt11 ENSDARG00000063636 1188 1.641 - 0.703 - - - - - - 0.938 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]
9. cry4 ENSDARG00000011890 980 1.633 - 0.713 - - - - - - 0.920 cryptochrome circadian clock 4 [Source:ZFIN;Acc:ZDB-GENE-010426-7]
10. atxn2 ENSDARG00000052897, ENSDARG00000115860 456 1.621 - 0.761 - - - 0.860 - - - ataxin 2 [Source:ZFIN;Acc:ZDB-GENE-060526-217]
11. isoc2 ENSDARG00000013371 1378 1.572 - 0.710 - - - - - - 0.862 isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
12. snx27a ENSDARG00000033804 2249 1.57 - 0.725 - - - - - - 0.845 sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
13. ERBB4_1 ERBB4_1 1064 1.561 - 0.713 - - - - - - 0.848
14. bxdc2 ENSDARG00000098935 1348 1.555 - 0.831 - - - - - 0.724 - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
15. CABZ01038493.1 ENSDARG00000117625 983 1.548 - - - - - 0.713 - - 0.835
16. snai1b ENSDARG00000046019 886 1.541 - 0.783 - 0.758 - - - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
17. slc7a6os ENSDARG00000010596 1599 1.513 - 0.806 - - - - 0.707 - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
18. dnph1 ENSDARG00000075730 403 1.505 - 0.788 - 0.717 - - - - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
19. FAM53C FAM53C 769 1.498 - - - - - - 0.790 0.708 -
20. fynb ENSDARG00000025319 1175 1.495 - - - 0.718 - - 0.777 - - FYN proto-oncogene, Src family tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-050706-89]
21. col27a1a 1747 1.489 - 0.742 - - - - - - 0.747 collagen, type XXVII, alpha 1a
22. gnaia ENSDARG00000044760, ENSDARG00000109225 2062 1.482 - 0.713 - - - - - - 0.769 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-2229]
23. mau2 ENSDARG00000042056 2378 1.46 - 0.740 - - - - - - 0.720 MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
24. si:ch211-67e16.4 ENSDARG00000086317 609 1.449 - 0.708 - - - - 0.741 - - si:ch211-67e16.4 [Source:ZFIN;Acc:ZDB-GENE-070912-311]
25. papss1 ENSDARG00000057099 809 1.437 - - - 0.724 - - 0.713 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
26. dnajc12 ENSDARG00000086691 260 0.964 - - - - - - - - 0.964 DnaJ (Hsp40) homolog, subfamily C, member 12 [Source:ZFIN;Acc:ZDB-GENE-070801-3]
27. C20H1orf131 C20H1orf131 406 0.961 - - - - - - - - 0.961
28. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.961 - - - - - - - - 0.961 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
29. imp4 ENSDARG00000054540 1396 0.96 - - - - - - - - 0.960 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
30. plch1 ENSDARG00000079253 1216 0.959 - - - - - - - - 0.959 phospholipase C, eta 1 [Source:ZFIN;Acc:ZDB-GENE-060503-398]
31. C25H12orf4 C25H12orf4 317 0.959 - - - - - - - - 0.959
32. tbc1d12a ENSDARG00000038237 698 0.959 - - - - - - - - 0.959 TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
33. si:ch211-129c21.1 ENSDARG00000024775 371 0.959 - - - - - - - - 0.959 si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
34. ide ENSDARG00000075570 4331 0.958 - - - - - - - - 0.958 insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
35. per1b ENSDARG00000012499 320 0.958 - - - - - - - - 0.958 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
36. kti12 ENSDARG00000054301, ENSDARG00000112513, ENSDARG00000114091 382 0.958 - - - - - - - - 0.958 KTI12 chromatin associated homolog [Source:ZFIN;Acc:ZDB-GENE-060825-174]
37. FAM83H FAM83H 190 0.958 - - - - - - - - 0.958
38. EMP3 EMP3 523 0.958 - - - - - - - - 0.958
39. eve1 ENSDARG00000056012 144 0.957 - - - - - - - - 0.957 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
40. enpp6 ENSDARG00000040469 187 0.957 - - - - - - - - 0.957 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
41. KIF2A_1 ENSDARG00000043571 189 0.957 - - - - - - - - 0.957 kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
42. tcea2 ENSDARG00000012927 440 0.957 - - - - - - - - 0.957 transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985]
43. casp2 ENSDARG00000062052 559 0.957 - - - - - - - - 0.957 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
44. CT030712.1 ENSDARG00000044355 83 0.956 - - - - - - - - 0.956 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
45. tp53i11b ENSDARG00000006025 569 0.956 - - - - - - - - 0.956 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
46. rnf165a ENSDARG00000077906 133 0.956 - - - - - - - - 0.956 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
47. si:ch211-89o5.1 si:ch211-89o5.1 91 0.956 - - - - - - - - 0.956
48. trim33l ENSDARG00000086126 241 0.956 - - - - - - - - 0.956 tripartite motif containing 33, like [Source:ZFIN;Acc:ZDB-GENE-030131-5695]
49. si:dkey-246e3.4 ENSDARG00000086390 50 0.956 - - - - - - - - 0.956 si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
50. trpc4apb ENSDARG00000020647 670 0.956 - - - - - - - - 0.956 transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
51. ERAP1_1 ERAP1_1 64 0.956 - - - - - - - - 0.956
52. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.956 - - - - - - - - 0.956 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
53. myo18ab ENSDARG00000061862 124 0.955 - - - - - - - - 0.955 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
54. cadpsa ENSDARG00000043661 160 0.955 - - - - - - - - 0.955 Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
55. MIER3 MIER3 114 0.955 - - - - - - - - 0.955
56. zgc:153151 ENSDARG00000069563 126 0.955 - - - - - - - - 0.955 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
57. cog2 ENSDARG00000004037 462 0.955 - - - - - - - - 0.955 component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
58. CABZ01063402.1 CABZ01063402.1 64 0.955 - - - - - - - - 0.955
59. gpr1 ENSDARG00000101366 733 0.955 - - - - - - - - 0.955 G protein-coupled receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091204-457]
60. nudt15 ENSDARG00000113961 381 0.955 - - - - - - - - 0.955 nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
61. gtf2h4 ENSDARG00000007136, ENSDARG00000036071 760 0.954 - - - - - - - - 0.954 general transcription factor IIH, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6779]
62. CR388047.3 ENSDARG00000117023 89 0.954 - - - - - - - - 0.954
63. cuedc1b ENSDARG00000054748 1638 0.954 - - - - - - - - 0.954 CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
64. BX569781.3 BX569781.3 576 0.953 - - - - - - - - 0.953
65. nfu1 ENSDARG00000068125 1743 0.953 - - - - - - - - 0.953 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
66. ACBD3 ENSDARG00000042623 159 0.953 - - - - - - - - 0.953 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
67. CR954145.1 CR954145.1 327 0.952 - - - - - - - - 0.952
68. PFKL_1 PFKL_1 298 0.952 - - - - - - - - 0.952
69. lrp1bb ENSDARG00000061517 172 0.952 - - - - - - - - 0.952 low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
70. rhd ENSDARG00000002194 269 0.952 - - - - - - - - 0.952 Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
71. slc25a39 ENSDARG00000007449 630 0.952 - - - - - - - - 0.952 solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
72. nxnl2 ENSDARG00000003934 386 0.951 - - - - - - - - 0.951 nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
73. mov10b.1 ENSDARG00000061177 370 0.951 - - - - - - - - 0.951 Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
74. ubap2l ENSDARG00000063219 1147 0.95 - - - - - - - - 0.950 ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
75. pank4 ENSDARG00000098453, ENSDARG00000114951 662 0.95 - - - - - - - - 0.950 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
76. tradd ENSDARG00000036057, ENSDARG00000117083 1583 0.95 - - - - - - - - 0.950 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
77. si:ch211-195h23.3 ENSDARG00000068431 322 0.95 - - - - - - - - 0.950 si:ch211-195h23.3 [Source:ZFIN;Acc:ZDB-GENE-070912-174]
78. GRAMD2 GRAMD2 300 0.95 - - - - - - - - 0.950
79. ythdf3 ENSDARG00000057939 475 0.95 - - - - - - - - 0.950 YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123]
80. nfs1 ENSDARG00000062237 2741 0.949 - - - - - - - - 0.949 NFS1 cysteine desulfurase [Source:ZFIN;Acc:ZDB-GENE-060405-1]
81. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.949 - - - - - - - - 0.949 tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
82. gpr56 gpr56 523 0.949 - - - - - - - - 0.949
83. asb13b ENSDARG00000089833 251 0.949 - - - - - - - - 0.949 ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
84. calhm2 ENSDARG00000039482 138 0.949 - - - - - - - - 0.949 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
85. prmt10 prmt10 312 0.949 - - - - - - - - 0.949
86. Mar-02 Mar-02 1812 0.949 - - - - - - - - 0.949
87. b3gat2 ENSDARG00000030733 348 0.949 - - - - - - - - 0.949 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
88. CABZ01008011.1 CABZ01008011.1 761 0.949 - - - - - - - - 0.949
89. zgc:112263 zgc:112263 473 0.948 - - - - - - - - 0.948
90. TIMP4 TIMP4 599 0.948 - - - - - - - - 0.948
91. endog ENSDARG00000058865 679 0.948 - - - - - - - - 0.948 endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
92. si:ch211-232i5.1 ENSDARG00000078072 1337 0.948 - - - - - - - - 0.948 si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
93. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.948 - - - - - - - - 0.948 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
94. rnf170 ENSDARG00000104069 838 0.947 - - - - - - - - 0.947 ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
95. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 0.947 - - - - - - - - 0.947 tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
96. TPMT TPMT 138 0.946 - - - - - - - - 0.946
97. cd36 ENSDARG00000032639 288 0.946 - - - - - - - - 0.946 CD36 molecule (thrombospondin receptor) [Source:ZFIN;Acc:ZDB-GENE-040718-55]
98. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 0.946 - - - - - - - - 0.946 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
99. glsb ENSDARG00000040705 1439 0.946 - - - - - - - - 0.946 glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
100. zgc:113184 ENSDARG00000098181 500 0.946 - - - - - - - - 0.946 zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]

There are 812 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA