Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for csrp3

Gene Name Gene ID Reads Annotation
csrp3 ENSDARG00000101706 21 cysteine and glycine-rich protein 3 (cardiac LIM protein) [Source:ZFIN;Acc:ZDB-GENE-041010-119]










Genes with expression patterns similar to csrp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. csrp3 ENSDARG00000101706 21 5 - - 1.000 1.000 - - 1.000 1.000 1.000 cysteine and glycine-rich protein 3 (cardiac LIM protein) [Source:ZFIN;Acc:ZDB-GENE-041010-119]
2. tnnc1a ENSDARG00000011400 165 2.792 - - - 0.970 - - - 0.947 0.875 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
3. cmlc1 ENSDARG00000032976 455 2.746 - - - 0.925 - - - 0.936 0.885 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
4. myl7 ENSDARG00000019096 1023 2.719 - - - 0.941 - - - 0.992 0.786 myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
5. nppa ENSDARG00000052960 295 2.69 - - - 0.946 - - - 0.972 0.772 natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
6. tnni1b ENSDARG00000052708 478 2.656 - - - 0.946 - - - 0.934 0.776 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
7. tnnt2a ENSDARG00000020610 313 2.625 - - - 0.890 - - - 0.971 0.764 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
8. vmhc 234 2.606 - - - 0.952 - - - 0.946 0.708 ventricular myosin heavy chain
9. si:ch211-260o22.1 si:ch211-260o22.1 34 2.602 - - - 0.899 - - - 0.931 0.772
10. lmod2b ENSDARG00000045864 63 2.425 - - - 0.855 - - - 0.822 0.748 leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
11. hspb12 139 1.822 - - - 0.978 - - - - 0.844 heat shock protein, alpha-crystallin-related, b12
12. LPL ENSDARG00000087697 18 1.801 - - 0.857 0.944 - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
13. adprhl1 ENSDARG00000041589 34 1.764 - - - - - - 1.000 0.764 - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
14. si:ch73-346m18.6 si:ch73-346m18.6 40 1.701 - - 0.701 - - - 1.000 - -
15. BX530066.1 BX530066.1 42 1.65 - - - 0.796 - - 0.854 - -
16. si:ch211-62a1.1 si:ch211-62a1.1 6 1.591 - - - 0.876 - - 0.715 - -
17. smtlb ENSDARG00000017251 7 1.583 - - - 0.876 - - - 0.707 - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
18. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1.583 - - - 0.876 - - - 0.707 - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
19. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1.583 - - - 0.876 - - - 0.707 -
20. scpp5 ENSDARG00000078622 15 1.564 - - 0.857 - - - - 0.707 - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
21. ncf2 ENSDARG00000005821 28 1.548 - - - 0.841 - - - 0.707 - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
22. rmi1 ENSDARG00000041376 674 1.449 - - - 0.716 - - 0.733 - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
23. CABZ01041769.1 CABZ01041769.1 17 1 - - - - - - 1.000 - -
24. TRIM14_11 TRIM14_11 2 1 - - - - - - 1.000 - -
25. plxnb2b ENSDARG00000036985 1 1 - - - - - - 1.000 - - plexin b2b [Source:ZFIN;Acc:ZDB-GENE-080902-1]
26. uo:ion006 uo:ion006 56 1 - - - - - - 1.000 - -
27. CABZ01072083.1 CABZ01072083.1 56 1 - - - - - - 1.000 - -
28. zgc:66313 ENSDARG00000030357 45 1 - - - - - - 1.000 - - zgc:66313 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]
29. acer3 ENSDARG00000093366 7 1 - - - - - - 1.000 - - alkaline ceramidase 3 [Source:ZFIN;Acc:ZDB-GENE-091204-155]
30. si:dkey-19a16.2 ENSDARG00000058794 8 1 - - - - - - 1.000 - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
31. CR356223.2_1 ENSDARG00000100655 1 1 - - - - - - 1.000 - -
32. CABZ01059415.1 CABZ01059415.1 1 1 - - - - - - 1.000 - -
33. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 1 - - - - - - 1.000 - - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
34. cldn2 ENSDARG00000044387 24 1 - - - - - - 1.000 - - claudin 2 [Source:ZFIN;Acc:ZDB-GENE-040912-26]
35. paqr5a ENSDARG00000041145, ENSDARG00000115247 38 1 - - - - - - 1.000 - - progestin and adipoQ receptor family member Va [Source:ZFIN;Acc:ZDB-GENE-040426-867]
36. crygm2c ENSDARG00000117097 1 1 - - - - - - 1.000 - - crystallin, gamma M2c [Source:ZFIN;Acc:ZDB-GENE-050516-11]
37. ttc7a ENSDARG00000074760 39 1 - - - - - - 1.000 - - tetratricopeptide repeat domain 7A [Source:ZFIN;Acc:ZDB-GENE-010319-27]
38. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 - - - - - - 1.000 - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
39. CABZ01046283.1 CABZ01046283.1 28 1 - - - - - - 1.000 - -
40. si:dkey-20l4.2 si:dkey-20l4.2 110 1 - - - - - - 1.000 - -
41. dao.2 ENSDARG00000035603 8 1 - - - - - - 1.000 - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
42. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - - - - - 1.000 - -
43. si:ch73-103l1.2 ENSDARG00000096505 17 1 - - - - - - 1.000 - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
44. si:ch211-191a16.5 ENSDARG00000096545 45 1 - - - - - - 1.000 - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
45. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - 1.000 - - si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
46. si:ch211-239j9.1 ENSDARG00000096319 27 1 - - - - - - 1.000 - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
47. CR376723.1 CR376723.1 8 1 - - - - - - 1.000 - -
48. si:ch211-167b20.7 si:ch211-167b20.7 3 1 - - - - - - 1.000 - -
49. AL929092.1_1 ENSDARG00000092217 3 1 - - - - - - 1.000 - -
50. si:dkey-22i16.3 34 1 - - - - - - 1.000 - - si:dkey-22i16.3
51. wisp1a ENSDARG00000054331 26 1 - - - - - - 1.000 - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
52. si:dkey-47k20.7 ENSDARG00000056014 1 1 - - - - - - 1.000 - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
53. MCOLN3 MCOLN3 4 1 - - - - - - 1.000 - -
54. si:dkey-251i8.2 si:dkey-251i8.2 2 1 - - - - - - 1.000 - -
55. CCDC120 ENSDARG00000032856, ENSDARG00000114382 30 1 - - - - - - 1.000 - - coiled-coil domain containing 120 [Source:ZFIN;Acc:ZDB-GENE-061027-93]
56. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - - - - - - 1.000 - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
57. CR391998.1 ENSDARG00000091817 15 1 - - - - - - 1.000 - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
58. si:ch211-145h19.2 7 1 - - - - - - 1.000 - - si:ch211-145h19.2
59. si:dkey-27p18.3 ENSDARG00000092228 38 1 - - - - - - 1.000 - - si:dkey-27p18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-287]
60. zgc:173556 82 1 - - - - - - 1.000 - - zgc:173556
61. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - - - - - - 1.000 - -
62. BX957353.1 BX957353.1 10 1 - - - - - - 1.000 - -
63. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - - - - 1.000 - -
64. CNGB3 CNGB3 7 1 - - - - - - 1.000 - -
65. DLEU7 DLEU7 91 1 - - - - - - 1.000 - -
66. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1 - - - - - - 1.000 - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
67. ugt5c1 ENSDARG00000061444 6 1 - - - - - - 1.000 - - UDP glucuronosyltransferase 5 family, polypeptide C1 [Source:ZFIN;Acc:ZDB-GENE-050419-68]
68. zgc:165539 ENSDARG00000027639 20 1 - - - - - - 1.000 - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
69. helt ENSDARG00000056400 482 1 - - - - - - 1.000 - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
70. USH1G USH1G 25 1 - - - - - - 1.000 - -
71. si:dkey-30j22.3 si:dkey-30j22.3 17 1 - - - - - - 1.000 - -
72. cttn ENSDARG00000011777 19 1 - - - - - - 1.000 - - cortactin [Source:ZFIN;Acc:ZDB-GENE-040715-3]
73. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - - - - 1.000 - -
74. gfra1a ENSDARG00000099732 33 1 - - - - - - 1.000 - - gdnf family receptor alpha 1a [Source:ZFIN;Acc:ZDB-GENE-010226-2]
75. zgc:171452 ENSDARG00000074069 6 1 - - - - - - 1.000 - - zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84]
76. CABZ01044346.1 CABZ01044346.1 12 1 - - - - - - 1.000 - -
77. zgc:114123 ENSDARG00000044956 9 1 - - - - - - 1.000 - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
78. ZNF337_21 ZNF337_21 53 1 - - - - - - 1.000 - -
79. cntn5 ENSDARG00000021584 30 1 - - - - - - 1.000 - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
80. rab42a ENSDARG00000034215 692 0.995 - - - - - - 0.995 - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
81. plek ENSDARG00000104325 21 0.992 - - - - - - 0.992 - - pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506]
82. trpc5b ENSDARG00000060837, ENSDARG00000114021 15 0.992 - - - - - - 0.992 - - transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24]
83. ACOT12 ENSDARG00000054534 61 0.99 - - - - - - 0.990 - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
84. CR388095.2 ENSDARG00000117604 76 0.99 - - - - - - 0.990 - -
85. si:ch211-190k17.31 si:ch211-190k17.31 29 0.99 - - - 0.990 - - - - -
86. si:ch73-196i15.3 ENSDARG00000094281 1005 0.984 - - - - - - 0.984 - - si:ch73-196i15.3 [Source:ZFIN;Acc:ZDB-GENE-091116-4]
87. atr ENSDARG00000079625 231 0.98 - - - - - - 0.980 - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
88. slc16a6a ENSDARG00000102793 60 0.975 - - - - - - 0.975 - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
89. si:ch211-255g12.7 si:ch211-255g12.7 44 0.973 - - - - - - 0.973 - -
90. CABZ01046997.2 CABZ01046997.2 7 0.97 - - - - - - 0.970 - -
91. CDH12_1 CDH12_1 57 0.97 - - - - - - 0.970 - -
92. egr2a ENSDARG00000044098 1101 0.968 - - - - - - - 0.968 - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
93. STRC ENSDARG00000105391 10 0.966 - - - - - - - 0.966 - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
94. C17orf105 C17orf105 1 0.966 - - - - - - - 0.966 -
95. si:ch211-202m22.1 ENSDARG00000094491 24 0.966 - - - - - - - 0.966 - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
96. napgl napgl 39 0.965 - - - - - - 0.965 - -
97. ush2a ENSDARG00000029482 10 0.965 - - - - - - 0.965 - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
98. trim35-27 ENSDARG00000035009 62 0.965 - - - - - - 0.965 - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
99. slc27a6 ENSDARG00000046053 57 0.962 - - - - - - 0.962 - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
100. uox ENSDARG00000007024 205 0.962 - - - - - - 0.962 - - urate oxidase [Source:ZFIN;Acc:ZDB-GENE-030826-24]

There are 488 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA