Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for csmd2

Gene Name Gene ID Reads Annotation
csmd2 ENSDARG00000001559 203 CUB and Sushi multiple domains 2 [Source:ZFIN;Acc:ZDB-GENE-030616-39]










Genes with expression patterns similar to csmd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. csmd2 ENSDARG00000001559 203 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CUB and Sushi multiple domains 2 [Source:ZFIN;Acc:ZDB-GENE-030616-39]
2. agpat6 agpat6 587 2.362 - 0.710 - - - - 0.874 0.778 -
3. NPAS3 ENSDARG00000109820 362 1.755 - - - - - 0.881 0.874 - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
4. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.749 - - - - - 0.920 0.829 - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
5. RNF115 ENSDARG00000062450 83 1.736 - 0.829 - - - - - 0.907 - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
6. ELFN1 ELFN1 59 1.719 - - - - - 0.800 0.919 - -
7. nlgn3b ENSDARG00000062376 171 1.707 - - - - - 0.879 - 0.828 - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
8. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 1.672 - - - - - 0.754 - 0.918 - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
9. dpysl5b ENSDARG00000059311 600 1.646 0.748 - - - - 0.898 - - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
10. nrxn2b ENSDARG00000063150 343 1.621 - - - - - 0.824 0.797 - - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
11. rufy2 ENSDARG00000062019, ENSDARG00000116213, ENSDARG00000116286 409 1.606 - - - - - - 0.774 0.832 - RUN and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070424-66]
12. zgc:63972 ENSDARG00000054288, ENSDARG00000112978 78 1.603 - - - - - - 0.717 0.886 - zgc:63972 [Source:ZFIN;Acc:ZDB-GENE-040426-1320]
13. TTC37 ENSDARG00000074314 356 1.599 - - - - - - 0.759 0.840 - tetratricopeptide repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-110125-2]
14. CCAR2 ENSDARG00000038302 363 1.591 0.874 - - - - 0.717 - - - cell cycle and apoptosis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-091204-207]
15. cacng2b ENSDARG00000102376 213 1.569 - - - - - 0.759 0.810 - - calcium channel, voltage-dependent, gamma subunit 2b [Source:ZFIN;Acc:ZDB-GENE-090624-3]
16. grin2bb ENSDARG00000030376 60 1.568 0.762 - - - - 0.806 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
17. MAPK8IP1 MAPK8IP1 121 1.56 - - - - 0.702 - 0.858 - -
18. gpr56 gpr56 523 1.554 - - - - - 0.722 - 0.832 -
19. CU179656.1 ENSDARG00000107086 270 1.548 - - - - - 0.771 0.777 - -
20. mtx1b ENSDARG00000036109 445 1.545 - 0.707 - - - - - 0.838 - metaxin 1b [Source:ZFIN;Acc:ZDB-GENE-021210-1]
21. CHL1 CHL1 1553 1.531 - - - - 0.714 0.817 - - -
22. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1.525 0.784 - - - - 0.741 - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
23. slc8a3 ENSDARG00000004931 338 1.524 - 0.729 - - - - - 0.795 - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
24. rac3a ENSDARG00000090062 394 1.5 - - - - - 0.756 - 0.744 - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
25. lppr3a lppr3a 1294 1.494 - - - - - 0.725 0.769 - -
26. C24H16orf11 C24H16orf11 32 1.487 - - - - 0.725 - 0.762 - -
27. CNGB1 CNGB1 40 1.485 - - - 0.740 - - 0.745 - -
28. C13H20orf194 C13H20orf194 580 1.481 - - - - - 0.754 - 0.727 -
29. mkln1 ENSDARG00000025576 1122 1.479 - 0.708 - - - - - 0.771 - muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
30. calca ENSDARG00000056590 150 1.469 0.708 - - - - 0.761 - - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
31. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.467 - 0.727 - - - 0.740 - - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
32. si:ch211-220f16.2 ENSDARG00000007976 638 1.461 - 0.757 - - - - - 0.704 - si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]
33. pycrl pycrl 80 1.458 0.753 - - - - - 0.705 - -
34. neurod neurod 1189 1.442 0.737 - - - - 0.705 - - -
35. hoxa1a ENSDARG00000104307 29 1 - - - - - 1.000 - - - homeobox A1a [Source:ZFIN;Acc:ZDB-GENE-000823-5]
36. flrt1a 107 1 - - - - - 1.000 - - - fibronectin leucine rich transmembrane protein 1a, transcript variant X2
37. si:ch211-152f6.6 si:ch211-152f6.6 278 0.985 - - - - - 0.985 - - -
38. CU855953.1 CU855953.1 137 0.974 - - - - - 0.974 - - -
39. NHSL1 NHSL1 182 0.961 - - - - - 0.961 - - -
40. evlb ENSDARG00000099720 245 0.955 - - - - - 0.955 - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
41. BX957322.2 ENSDARG00000095302 68 0.952 - - - - - - 0.952 - -
42. bhlhe22 ENSDARG00000058039 1673 0.949 - - - - - 0.949 - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
43. si:ch73-196k8.2 si:ch73-196k8.2 427 0.948 - - - - - - - 0.948 -
44. tgm5l ENSDARG00000098837 174 0.947 - - - - - - - 0.947 - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
45. chrm4a ENSDARG00000069254 32 0.946 - - - - - 0.946 - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
46. si:ch211-141o9.10 ENSDARG00000077900 98 0.941 - - - - - - - 0.941 - si:ch211-141o9.10 [Source:ZFIN;Acc:ZDB-GENE-130603-5]
47. APBB3 ENSDARG00000053771 654 0.939 - - - - - 0.939 - - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
48. C13H10orf11 1209 0.938 - - - - - - - 0.938 - c13h10orf11 homolog (H. sapiens), transcript variant X2
49. GSTK1_1 GSTK1_1 316 0.935 - - - - - - - 0.935 -
50. igsf9ba ENSDARG00000033845 158 0.93 - - - - - 0.930 - - - immunoglobulin superfamily, member 9Ba [Source:ZFIN;Acc:ZDB-GENE-060503-729]
51. zgc:110699 ENSDARG00000017474 381 0.93 - - - - - 0.930 - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
52. pbx3a ENSDARG00000089262 97 0.929 - - - - - 0.929 - - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
53. PRKAR2B ENSDARG00000036446 812 0.921 - - - - - 0.921 - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
54. SNORA74 SNORA74 284 0.918 - - - - - 0.918 - - -
55. d2hgdh ENSDARG00000060210 362 0.914 - - - - - - - 0.914 - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
56. mafb ENSDARG00000076520 139 0.911 - - - - - - 0.911 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b) [Source:ZFIN;Acc:ZDB-GENE-141211-38]
57. frmd4bb ENSDARG00000076496 18 0.909 - - - - - - - 0.909 - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
58. CABZ01021538.1 CABZ01021538.1 67 0.908 - - - - - 0.908 - - -
59. KCTD5 KCTD5 109 0.904 - - - - - 0.904 - - -
60. rassf2a ENSDARG00000029865, ENSDARG00000113625 1134 0.902 - - - - - 0.902 - - - Ras association (RalGDS/AF-6) domain family member 2a [Source:ZFIN;Acc:ZDB-GENE-040912-124]
61. zgc:100906 ENSDARG00000033599 344 0.901 - - - - - 0.901 - - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
62. diras1a ENSDARG00000028066 126 0.9 - - - - - 0.900 - - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
63. si:rp71-1i20.2 ENSDARG00000043198 113 0.9 - - - - - - - 0.900 - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
64. slc15a2 ENSDARG00000032010 451 0.9 - 0.900 - - - - - - - solute carrier family 15 (oligopeptide transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5866]
65. LRFN5_1 LRFN5_1 96 0.899 - - - - - 0.899 - - -
66. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.899 - - - - - - - 0.899 - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
67. zgc:113294 ENSDARG00000032285 132 0.898 - - - - - - - 0.898 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
68. ASTL ASTL 24 0.898 - - - - - - - 0.898 -
69. smyd3 ENSDARG00000058050 69 0.897 - - - - - - - 0.897 - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
70. CABZ01086801.1 CABZ01086801.1 41 0.896 - - - - - - - 0.896 -
71. fbxw2 ENSDARG00000009745 618 0.895 - - - - - - - 0.895 - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
72. si:ch211-237l4.6 ENSDARG00000056915 49 0.894 - - - - - - - 0.894 - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
73. cd40 ENSDARG00000054968 90 0.894 - - - - - - - 0.894 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
74. mark4a ENSDARG00000023914, ENSDARG00000112220 445 0.893 - - - - - 0.893 - - - MAP/microtubule affinity-regulating kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060531-156]
75. pou2f2b pou2f2b 134 0.893 - - - - - 0.893 - - -
76. si:ch211-39k3.2 ENSDARG00000075881 531 0.892 - - - - - - - 0.892 - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
77. cyp2k8 ENSDARG00000101190 69 0.891 - - - - - - - 0.891 - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
78. dusp5 ENSDARG00000019307, ENSDARG00000110831 476 0.889 - - - - - - - 0.889 - dual specificity phosphatase 5 [Source:ZFIN;Acc:ZDB-GENE-010625-1]
79. traf1 ENSDARG00000069482 50 0.888 - - - - - - - 0.888 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
80. CU855815.2 CU855815.2 80 0.888 - - - - - - - 0.888 -
81. NGFR NGFR 186 0.888 - - - - - - - 0.888 -
82. MAN1A2 ENSDARG00000041728 359 0.887 - - - - - - - 0.887 - mannosidase, alpha, class 1A, member 2 [Source:ZFIN;Acc:ZDB-GENE-070912-390]
83. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 0.886 - - - - - - - 0.886 - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
84. CABZ01071530.2 CABZ01071530.2 47 0.886 - - - - - 0.886 - - -
85. POLRMT ENSDARG00000101220 215 0.886 - - - - - - - 0.886 - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
86. syt11b ENSDARG00000056105 578 0.886 - - - - - 0.886 - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
87. TMEM55B_1 TMEM55B_1 495 0.885 - - - - - 0.885 - - -
88. fgf4 ENSDARG00000105230 407 0.885 - - - - - - - 0.885 - fibroblast growth factor 4 [Source:ZFIN;Acc:ZDB-GENE-001006-1]
89. si:dkey-14d8.2 38 0.885 - - - - - - - 0.885 - si:dkey-14d8.2
90. rsrc1 ENSDARG00000033987 552 0.885 - - - - - - - 0.885 - arginine/serine-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2374]
91. crfb17 511 0.885 - - - - - - - 0.885 - cytokine receptor family member B17
92. TUBB8P7 TUBB8P7 1353 0.884 - - - - - 0.884 - - -
93. lzts3b ENSDARG00000058558 166 0.884 - - - - - 0.884 - - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
94. GPRIN3 GPRIN3 169 0.883 - - - - - - - 0.883 -
95. RAB39B RAB39B 482 0.882 - - - - - 0.882 - - -
96. NEFH NEFH 101 0.882 - - - - - 0.882 - - -
97. rrp15 ENSDARG00000013478 1126 0.882 - - - - - - - 0.882 - ribosomal RNA processing 15 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5261]
98. CLMN ENSDARG00000096867 73 0.881 - - - - - - - 0.881 - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
99. si:dkey-93n13.2 ENSDARG00000092816 119 0.881 - - - - - - - 0.881 - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
100. ctnnd2b ENSDARG00000003779 964 0.88 - - - - - 0.880 - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]

There are 936 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA