Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for csf1b

Gene Name Gene ID Reads Annotation
csf1b ENSDARG00000068263 248 colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]










Genes with expression patterns similar to csf1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. csf1b ENSDARG00000068263 248 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
2. dbx2 2971 3.357 0.884 0.714 - - - 0.849 0.910 - - developing brain homeobox 2
3. pax6a ENSDARG00000103379 3061 3.133 0.843 0.713 - - - 0.720 0.857 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
4. GJD2_1 GJD2_1 3045 3.064 0.725 0.714 - - - 0.725 0.900 - -
5. AL935029.1 AL935029.1 514 2.662 - 0.928 - - - 0.848 0.886 - -
6. SPOCK1 ENSDARG00000074644 794 2.66 0.861 - - - - 0.851 0.948 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
7. cspg5a ENSDARG00000069981 1699 2.649 0.914 - - - - 0.814 0.921 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
8. nbeaa ENSDARG00000070080 862 2.605 0.839 - - - - 0.852 0.914 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
9. C8H1orf106 C8H1orf106 2690 2.6 0.867 - - - - 0.797 0.936 - -
10. capn1b ENSDARG00000052748, ENSDARG00000117045 320 2.57 0.933 0.883 - - - 0.754 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
11. gng3 ENSDARG00000009553 2530 2.56 0.859 - - - - 0.773 0.928 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
12. slc17a6b ENSDARG00000041150 823 2.551 0.927 0.714 - - - - 0.910 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
13. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.542 0.795 0.816 - - - - 0.931 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
14. Mar-09 Mar-09 126 2.54 0.851 - - - - 0.872 0.817 - -
15. slc8a2b ENSDARG00000100592 598 2.536 0.793 - - - - 0.811 0.932 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
16. scube2 ENSDARG00000037362 2833 2.517 0.908 - - - - 0.863 0.746 - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
17. dnajc5aa ENSDARG00000042948 2885 2.505 0.772 - - - - 0.804 0.929 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
18. sypb ENSDARG00000002230 262 2.503 0.740 - - - - 0.856 0.907 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
19. her2 ENSDARG00000038205 3219 2.496 0.830 - - - - 0.716 0.950 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
20. AGO1 ENSDARG00000092644 4521 2.492 0.780 - - - - 0.776 0.936 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
21. prdm13 ENSDARG00000078701 205 2.488 0.848 - - - - 0.839 0.801 - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
22. scrt2 ENSDARG00000056175 4331 2.474 0.878 0.756 - - - - 0.840 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
23. vim ENSDARG00000010008 3551 2.468 0.761 - - - - 0.750 0.957 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
24. jag1a ENSDARG00000030289 1275 2.46 0.842 0.761 - - - - 0.857 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
25. sox12 ENSDARG00000025847 681 2.451 0.936 0.714 - - - - 0.801 - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
26. snap25b ENSDARG00000058117 469 2.443 0.782 - - - - 0.747 0.914 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
27. nes ENSDARG00000088805 2710 2.434 0.706 0.762 - - - - 0.966 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
28. neurog1 ENSDARG00000056130 3924 2.431 0.768 - - - - 0.711 0.952 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
29. syngr3a ENSDARG00000014871 405 2.428 0.746 - - - - 0.747 0.935 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
30. fgf13b ENSDARG00000056633 455 2.428 0.903 - - - - 0.762 0.763 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
31. scn2b ENSDARG00000101713 796 2.424 - 0.731 - - - 0.789 0.904 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
32. pou4f1 ENSDARG00000005559 821 2.421 0.782 - - - - 0.767 0.872 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
33. NTRK3 NTRK3 163 2.417 0.848 0.714 - - - - 0.855 - -
34. LMTK3 LMTK3 222 2.409 0.916 - - - - 0.700 0.793 - -
35. rbfox3 rbfox3 1443 2.407 0.711 - - - - 0.804 0.892 - -
36. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.405 0.743 0.714 - - - - 0.948 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
37. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.398 0.845 0.709 - - - - 0.844 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
38. vgf ENSDARG00000105529 247 2.396 0.707 - - - - 0.759 0.930 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
39. slc35g2b ENSDARG00000045447 378 2.386 0.719 - - - - 0.714 0.953 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
40. neflb ENSDARG00000012426 298 2.378 - 0.714 - - - 0.754 0.910 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
41. amph ENSDARG00000007663 599 2.376 0.762 0.731 - - - - 0.883 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
42. jph3 ENSDARG00000102204 175 2.373 0.885 0.714 - - - - 0.774 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
43. rheb ENSDARG00000090213 1432 2.373 0.702 - - - - 0.737 0.934 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
44. epha4b ENSDARG00000011600 3110 2.372 0.732 - - - - 0.755 0.885 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
45. scn8aa ENSDARG00000005775 792 2.368 0.732 - - - - 0.753 0.883 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
46. EPB41L1 EPB41L1 1896 2.364 0.790 - - - - 0.726 0.848 - -
47. PPP2R5B ENSDARG00000054931 213 2.363 0.743 - - - - 0.751 0.869 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
48. ckbb ENSDARG00000043257 3503 2.36 0.783 - - - - 0.707 0.870 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
49. b3gat2 ENSDARG00000030733 348 2.354 0.765 - - - - 0.746 0.843 - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
50. PDZD4 ENSDARG00000090564 131 2.354 0.846 - - - - 0.794 0.714 - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
51. clstn3 ENSDARG00000073883 590 2.349 0.774 - - - - 0.727 0.848 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
52. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 2.348 0.761 - - - - 0.807 0.780 - - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
53. INA INA 950 2.346 0.816 - - - - 0.713 0.817 - -
54. nefmb ENSDARG00000043697 2052 2.344 0.794 - - - - 0.814 0.736 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
55. CAMSAP3 ENSDARG00000059475 263 2.305 0.707 - - - - 0.768 0.830 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
56. SYT2 ENSDARG00000014169 265 2.304 0.745 - - - - 0.711 0.848 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
57. rufy3 ENSDARG00000029692 3031 2.303 0.761 - - - - 0.729 0.813 - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
58. trim46b ENSDARG00000058649 54 2.302 0.757 0.714 - - - - 0.831 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
59. ZNF337_7 ZNF337_7 198 2.297 0.795 0.757 - - - - 0.745 - -
60. lhx1a ENSDARG00000014018 958 2.291 - 0.783 - - - 0.712 0.796 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
61. TUBB8P7_2 TUBB8P7_2 565 2.268 0.755 - - - - 0.706 0.807 - -
62. MCTP1 MCTP1 219 2.263 0.771 0.757 - - - - 0.735 - -
63. KCNAB2 KCNAB2 129 2.26 0.715 0.714 - - - - 0.831 - -
64. gad2 ENSDARG00000015537 724 2.253 - 0.753 - - - 0.700 0.800 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
65. UNC13A UNC13A 36 2.232 0.795 - - - - 0.713 0.724 - -
66. stmn2b ENSDARG00000070537 1586 2.224 0.706 - - - - 0.707 0.811 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
67. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 2.218 0.715 - - - - 0.793 0.710 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
68. CT573433.2 CT573433.2 115 2.147 0.728 0.714 - - - 0.705 - - -
69. ncam1a ENSDARG00000056181 193 1.84 0.901 0.939 - - - - - - - neural cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-990415-31]
70. FAM196A 82 1.836 - 0.947 - - - - 0.889 - - family with sequence similarity 196 member A
71. negr1 ENSDARG00000021607 1051 1.818 0.894 - - - - - 0.924 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
72. adam23a ENSDARG00000062323 580 1.817 0.874 - - - - - 0.943 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
73. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.805 0.953 - - - - - 0.852 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
74. cadpsb ENSDARG00000070567 458 1.794 - - - - - 0.828 0.966 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
75. UBE2QL1 ENSDARG00000079276 3474 1.792 0.903 - - - - - 0.889 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
76. bhlhe22 ENSDARG00000058039 1673 1.789 0.902 - - - - - 0.887 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
77. stmn1b ENSDARG00000033655 9491 1.784 0.842 - - - - - 0.942 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
78. kcnj11l ENSDARG00000031438 369 1.781 0.908 - - - - - 0.873 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
79. HSPA4L ENSDARG00000053544 363 1.78 - 0.912 - - - - 0.868 - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
80. hoxa3a ENSDARG00000103862 2239 1.78 0.856 - - - - - 0.924 - - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
81. fbxo41 ENSDARG00000078908 95 1.78 - - - - - 0.835 0.945 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
82. irx1b ENSDARG00000056594 2224 1.775 0.811 - - - - - 0.964 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
83. nacad ENSDARG00000012347 1268 1.773 - - - - - 0.873 0.900 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
84. lrrn3 lrrn3 137 1.771 0.857 - - - - - 0.914 - -
85. sv2bb ENSDARG00000060711 196 1.77 0.840 - - - - - 0.930 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
86. npas3b npas3b 1446 1.764 0.797 - - - - - 0.967 - -
87. slc12a5b ENSDARG00000078187 329 1.761 - - - - - 0.796 0.965 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
88. ncana 1537 1.761 0.795 - - - - - 0.966 - - neurocan a
89. rusc1 ENSDARG00000078125 617 1.759 - - - - - 0.837 0.922 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
90. IGLON5 ENSDARG00000022176 1353 1.759 - - - - - 0.839 0.920 - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
91. vsnl1a ENSDARG00000023228 1584 1.755 0.964 - - - - - 0.791 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
92. clstn1 ENSDARG00000031720 5286 1.749 - - - - - 0.826 0.923 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
93. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.746 0.807 - - - - - 0.939 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
94. nlgn3b ENSDARG00000062376 171 1.746 0.852 - - - - - 0.894 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
95. si:dkeyp-69c1.7 ENSDARG00000087165 31 1.745 0.937 - - - - 0.808 - - - si:dkeyp-69c1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-69]
96. dpysl5b ENSDARG00000059311 600 1.745 - - - - - 0.802 0.943 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
97. prrt1 ENSDARG00000062208 368 1.744 0.833 - - - - - 0.911 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
98. elavl3 ENSDARG00000014420 8644 1.743 - - - - - 0.795 0.948 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
99. zgc:194665 ENSDARG00000004577 136 1.742 - - - - - 0.913 0.829 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
100. gfap ENSDARG00000025301 5584 1.739 0.811 - - - - - 0.928 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]

There are 1823 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA