Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for csf1a

Gene Name Gene ID Reads Annotation
csf1a ENSDARG00000075343 548 colony stimulating factor 1a (macrophage) [Source:ZFIN;Acc:ZDB-GENE-080204-107]










Genes with expression patterns similar to csf1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. csf1a ENSDARG00000075343 548 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 colony stimulating factor 1a (macrophage) [Source:ZFIN;Acc:ZDB-GENE-080204-107]
2. pir ENSDARG00000056638 722 1.781 - 0.800 - - - - - 0.981 - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
3. gpr146 ENSDARG00000059610 810 1.739 - - - - - - 0.770 0.969 - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
4. PPP1R16B ENSDARG00000079860 390 1.733 0.807 0.926 - - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
5. si:ch211-76l23.4 ENSDARG00000096242 202 1.704 - 0.728 - - - - - 0.976 - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
6. cmtm3 ENSDARG00000008811, ENSDARG00000115417 502 1.701 - 0.736 - - - - - 0.965 - CKLF-like MARVEL transmembrane domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040801-206]
7. CABZ01081748.1 ENSDARG00000102139 31 1.565 - 0.774 - - 0.791 - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
8. zgc:171599 ENSDARG00000044847 275 1.564 - 0.852 - - - - 0.712 - - zgc:171599 [Source:ZFIN;Acc:ZDB-GENE-080219-33]
9. zgc:193811 ENSDARG00000076745 72 1.484 - - 0.706 - 0.778 - - - - zgc:193811 [Source:ZFIN;Acc:ZDB-GENE-081022-43]
10. agtr1b ENSDARG00000045443 232 0.991 - - - - - - - 0.991 - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
11. RIN3 ENSDARG00000077618 745 0.99 - - - - - - - 0.990 - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
12. si:dkey-238o14.5 si:dkey-238o14.5 450 0.988 - - - - - - - 0.988 -
13. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.986 - - - - - - - 0.986 - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
14. smyd5 ENSDARG00000071669 1194 0.986 - - - - - - - 0.986 - SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
15. slc6a11a ENSDARG00000074002 189 0.983 - - - - - - - 0.983 - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
16. hsd17b4 ENSDARG00000101239 301 0.982 - - - - - - - 0.982 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
17. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.982 - - - - - - - 0.982 - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
18. CABZ01073405.1 CABZ01073405.1 275 0.982 - - - - - - - 0.982 -
19. hcst ENSDARG00000092074 172 0.982 - - - - - - - 0.982 - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
20. PARP14 PARP14 164 0.982 - - - - - - - 0.982 -
21. zgc:113019 ENSDARG00000099743 994 0.982 - - - - - - - 0.982 - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
22. ufsp2 ENSDARG00000056369, ENSDARG00000115753 998 0.981 - - - - - - - 0.981 - ufm1-specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8726]
23. kmt2d ENSDARG00000037060 1232 0.981 - - - - - - - 0.981 - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
24. wscd2 ENSDARG00000061819 304 0.981 - - - - - - - 0.981 - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
25. TAF4 TAF4 658 0.981 - - - - - - - 0.981 -
26. cxxc1l cxxc1l 1035 0.981 - - - - - - - 0.981 -
27. C17H15orf57 C17H15orf57 1366 0.981 - - - - - - - 0.981 -
28. ftr23 ENSDARG00000067985 254 0.981 - - - - - - - 0.981 - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
29. C6H1orf159 C6H1orf159 406 0.981 - - - - - - - 0.981 -
30. golga4 ENSDARG00000075331 447 0.981 - - - - - - - 0.981 - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
31. arpc5a ENSDARG00000039142 5482 0.98 - - - - - - - 0.980 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
32. agk ENSDARG00000009837, ENSDARG00000113514 811 0.98 - - - - - - - 0.980 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
33. si:dkey-204f11.64 ENSDARG00000094695 586 0.98 - - - - - - - 0.980 - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
34. myo9b ENSDARG00000077410 1956 0.979 - - - - - - - 0.979 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
35. TUBGCP6 1991 0.979 - - - - - - - 0.979 - tubulin, gamma complex associated protein 6
36. slc30a9 ENSDARG00000057272 766 0.979 - - - - - - - 0.979 - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
37. si:dkey-38p12.2 si:dkey-38p12.2 504 0.979 - - - - - - - 0.979 -
38. rdh12 ENSDARG00000018069 396 0.979 - - - - - - - 0.979 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
39. prelid1b ENSDARG00000044169 501 0.979 - - - - - - - 0.979 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
40. si:dkey-193b15.6 si:dkey-193b15.6 1340 0.978 - - - - - - - 0.978 -
41. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.978 - - - - - - - 0.978 - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
42. srebf2 ENSDARG00000063438 1982 0.978 - - - - - - - 0.978 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
43. nptx1l ENSDARG00000074671 569 0.977 - - - - - - - 0.977 - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
44. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 0.977 - - - - - - - 0.977 - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
45. USP6 USP6 613 0.977 - - - - - - - 0.977 -
46. cnp ENSDARG00000070822 649 0.976 - - - - - - - 0.976 - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
47. fam96b 2255 0.976 - - - - - - - 0.976 - family with sequence similarity 96, member B
48. si:dkey-3h3.3 ENSDARG00000067718 225 0.976 - - - - - - - 0.976 - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
49. paxip1 ENSDARG00000005606 1417 0.976 - - - - - - - 0.976 - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
50. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.976 - - - - - - - 0.976 - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
51. araf ENSDARG00000054533 1132 0.975 - - - - - - - 0.975 - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
52. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 0.975 - - - - - - - 0.975 - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
53. BX649554.3_1 BX649554.3_1 1071 0.975 - - - - - - - 0.975 -
54. vps4b ENSDARG00000069175 1922 0.974 - - - - - - - 0.974 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
55. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.974 - - - - - - - 0.974 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
56. tfe3b ENSDARG00000019457, ENSDARG00000111231 507 0.974 - - - - - - - 0.974 - transcription factor binding to IGHM enhancer 3b [Source:ZFIN;Acc:ZDB-GENE-010919-3]
57. lamp1 1017 0.974 - - - - - - - 0.974 - lysosomal-associated membrane protein 1
58. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.973 - - - - - - - 0.973 - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
59. zgc:113443 359 0.973 - - - - - - - 0.973 - zgc:113443, transcript variant X3
60. GGT7 ENSDARG00000115805 481 0.973 - - - - - - - 0.973 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
61. LRP10 ENSDARG00000054539 1895 0.973 - - - - - - - 0.973 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
62. exoc7 ENSDARG00000087229 987 0.973 - - - - - - - 0.973 - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
63. dyrk1b ENSDARG00000070187 2777 0.972 - - - - - - - 0.972 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
64. epc1 epc1 1164 0.972 - - - - - - - 0.972 -
65. rgs12b ENSDARG00000036774 5088 0.971 - - - - - - - 0.971 - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
66. RNF145 RNF145 1364 0.971 - - - - - - - 0.971 -
67. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 0.97 - - - - - - - 0.970 - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
68. WDR77 2463 0.97 - - - - - - - 0.970 - WD repeat domain 77
69. gigfy2 3194 0.97 - - - - - - - 0.970 - GRB10 interacting GYF protein 2, transcript variant X1
70. sly1 sly1 2403 0.969 - - - - - - - 0.969 -
71. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.968 - - - - - - - 0.968 - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
72. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 0.968 - - - - - - - 0.968 - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
73. COL13A1 1565 0.968 - - - - - - - 0.968 - collagen, type XIII, alpha 1, transcript variant X1
74. casc5 1487 0.968 - - - - - - - 0.968 - cancer susceptibility candidate 5, transcript variant X3
75. rnaseka ENSDARG00000069461 10304 0.967 - - - - - - - 0.967 - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
76. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 0.966 - - - - - - - 0.966 - nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
77. yy1b ENSDARG00000027978 2669 0.964 - - - - - - - 0.964 - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
78. PHLPP1 ENSDARG00000078694 2466 0.964 - - - - - - - 0.964 - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
79. CCDC167 ENSDARG00000045850 1024 0.963 - - - - - - - 0.963 - coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
80. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 0.963 - - - - - - - 0.963 - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
81. cenpl ENSDARG00000038802 696 0.962 - - - - - - - 0.962 - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
82. drg2 ENSDARG00000006642 1167 0.962 - - - - - - - 0.962 - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
83. elovl6l ENSDARG00000038639 1184 0.961 - - - - - - - 0.961 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
84. gpx4b ENSDARG00000076836 8085 0.961 - - - - - - - 0.961 - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
85. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 0.961 - - - - - - - 0.961 - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
86. qars ENSDARG00000010316 2715 0.961 - - - - - - - 0.961 - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
87. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 0.96 - - - - - - - 0.960 - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
88. aldh7a1 ENSDARG00000018426 4637 0.96 - - - - - - - 0.960 - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
89. scaf11 ENSDARG00000045885 3531 0.96 - - - - - - - 0.960 - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
90. rabac1 ENSDARG00000004171 2708 0.96 - - - - - - - 0.960 - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
91. pcyt2 ENSDARG00000043003 3506 0.96 - - - - - - - 0.960 - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
92. arap3 ENSDARG00000076801 725 0.96 - - - - - - - 0.960 - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
93. ell ENSDARG00000000568 1404 0.959 - - - - - - - 0.959 - elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
94. AIFM2 ENSDARG00000077549 1419 0.959 - - - - - - - 0.959 - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
95. uba5 ENSDARG00000063588 1260 0.959 - - - - - - - 0.959 - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
96. lepre1 lepre1 5346 0.958 - - - - - - - 0.958 -
97. stox2a ENSDARG00000070162 1620 0.954 - - - - - - - 0.954 - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
98. RGL3 RGL3 422 0.954 - - - - - - - 0.954 -
99. nudt17 ENSDARG00000008014 479 0.954 - - - - - - - 0.954 - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
100. st6gal2 st6gal2 1570 0.954 - - - - - - - 0.954 -

There are 832 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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