Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for csdc2a

Gene Name Gene ID Reads Annotation
csdc2a ENSDARG00000041323, ENSDARG00000115932 490 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]










Genes with expression patterns similar to csdc2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
2. mllt11 ENSDARG00000071026 2518 4.033 - 0.833 - - - 0.873 0.806 0.770 0.751 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
3. st18 663 3.951 0.746 - - - - 0.753 0.841 0.851 0.760 suppression of tumorigenicity 18, zinc finger
4. clvs2 ENSDARG00000053122 1390 3.447 - 0.953 - - - - 0.866 0.842 0.786 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
5. C7H4orf48 C7H4orf48 1455 3.375 - 0.911 - - - 0.773 0.858 0.833 -
6. Sep-03 Sep-03 1124 3.34 - 0.863 - - - 0.908 0.771 - 0.798
7. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 3.339 - - - - - 0.813 0.837 0.896 0.793 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
8. nbeaa ENSDARG00000070080 862 3.333 - 0.945 - - - 0.756 0.850 - 0.782 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
9. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 3.307 - - - - - 0.804 0.906 0.819 0.778 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
10. gap43 ENSDARG00000099744 4114 3.29 - - - - - 0.846 0.868 0.749 0.827 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
11. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 3.288 0.772 0.812 - - - 0.781 0.923 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
12. tuba1c ENSDARG00000055216 8384 3.282 - - - - - 0.877 0.886 0.700 0.819 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
13. marcksa ENSDARG00000004049 2518 3.259 - - - - - 0.778 0.821 0.821 0.839 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
14. rap2ip rap2ip 681 3.237 - - - - - 0.846 0.863 0.761 0.767
15. sprn ENSDARG00000056004 128 3.214 0.801 - - - - 0.768 0.800 0.845 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
16. hmp19 2554 3.204 - - - - - 0.845 0.867 0.702 0.790 HMP19 protein
17. rtn1b ENSDARG00000021143 1682 3.163 - - - - - 0.852 0.845 0.734 0.732 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
18. dpysl4 ENSDARG00000103490 534 3.148 0.722 - - - - - 0.883 0.796 0.747 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
19. her4.3 ENSDARG00000070770 613 3.142 - - - - - 0.746 0.839 0.848 0.709 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
20. PPP2R5B ENSDARG00000054931 213 3.092 - - - - - 0.861 0.805 0.712 0.714 protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
21. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 3.074 - - - - - 0.713 0.810 0.836 0.715 scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
22. lppr3a lppr3a 1294 3.07 - - - - - 0.875 0.740 0.707 0.748
23. ptbp2b ENSDARG00000015901 2458 3.057 0.740 - - - - 0.705 0.806 - 0.806 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
24. arnt2 ENSDARG00000103697 5731 3.03 - - - - - 0.833 0.733 0.751 0.713 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
25. sept5b ENSDARG00000036031 188 3.013 0.781 - - - - - 0.701 0.792 0.739 septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
26. nrcam nrcam 397 2.953 - - - - - 0.708 0.749 0.783 0.713
27. msl2a ENSDARG00000038909 1357 2.853 - - - - - 0.727 0.707 0.701 0.718 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
28. adam11 ENSDARG00000079204 298 2.708 - 0.936 - - - 0.965 0.807 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
29. adcyap1b ENSDARG00000027740 1539 2.625 - 0.901 - - - 0.888 - 0.836 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
30. scrt1a ENSDARG00000100821 2687 2.617 - 0.962 - - - 0.890 - 0.765 - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
31. dpysl5a ENSDARG00000011141 1827 2.615 - - - - - 0.873 0.910 - 0.832 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
32. gabra5 ENSDARG00000070730 156 2.613 - 0.900 - - - 0.814 0.899 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
33. cdk5r1b ENSDARG00000045087 2075 2.607 - 0.895 - - - 0.837 0.875 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
34. INA INA 950 2.594 - 0.896 - - - 0.839 0.859 - -
35. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.585 - - - - - 0.907 0.876 - 0.802 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
36. nadl1.1 1200 2.584 - - - - - 0.951 0.877 - 0.756 neural adhesion molecule L1.1, transcript variant X1
37. nrarpb ENSDARG00000018958 6225 2.563 - - - - - 0.876 0.884 - 0.803 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
38. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.555 - 0.850 - - - 0.862 0.843 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
39. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.553 - 0.960 - - - 0.817 0.776 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
40. dpysl3 ENSDARG00000002587 4381 2.553 - - - - - 0.868 0.885 - 0.800 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
41. CABZ01111990.1 CABZ01111990.1 4374 2.54 - - - - - 0.820 0.894 0.826 -
42. atp6v0cb ENSDARG00000036577 3472 2.539 - - - - - 0.911 0.889 - 0.739 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
43. lhx5 ENSDARG00000057936 785 2.53 - - - - - 0.806 0.886 0.838 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
44. her4.1 ENSDARG00000056732 1264 2.526 - - - - - 0.916 0.811 0.799 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
45. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.518 - - - - - - 0.877 0.804 0.837 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
46. ndrg4 ENSDARG00000103937 1234 2.512 - - - - - 0.828 0.832 - 0.852 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
47. LMTK3 LMTK3 222 2.506 - - - - - 0.753 0.881 0.872 -
48. nhlh2 ENSDARG00000025495 1860 2.502 - - - - - 0.854 0.865 - 0.783 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
49. ADAM22 ENSDARG00000060532 2259 2.488 - - - - - 0.718 0.862 0.908 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
50. nell2b ENSDARG00000062797 854 2.485 - - - - - 0.872 0.877 0.736 - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
51. pax6a ENSDARG00000103379 3061 2.479 - - - - - 0.897 0.874 0.708 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
52. ppfia4 ENSDARG00000053205 276 2.476 - 0.930 - - - 0.722 0.824 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
53. celf3a ENSDARG00000034668 2432 2.472 - - - - - 0.889 - 0.745 0.838 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
54. ppp3ca ENSDARG00000004988 615 2.469 - 0.865 - - - 0.781 0.823 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
55. RLTPR 1158 2.468 - - - - - - 0.923 0.792 0.753 RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
56. pcdh1gc5 ENSDARG00000104826 10052 2.464 0.725 - - - - 0.860 0.879 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
57. tmem35 ENSDARG00000052567 5685 2.461 - - - - - 0.829 0.829 - 0.803 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
58. ZFHX3 ENSDARG00000103057 7759 2.46 - - - - - 0.802 0.843 0.815 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
59. fgf13b ENSDARG00000056633 455 2.459 - 0.906 - - - 0.780 0.773 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
60. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.455 - 0.744 - - - 0.849 0.862 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
61. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.454 0.753 - - - - 0.815 0.886 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
62. SPOCK1 ENSDARG00000074644 794 2.451 - - - - - 0.846 0.886 0.719 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
63. elavl3 ENSDARG00000014420 8644 2.448 - - - - - 0.796 0.858 0.794 - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
64. hmgb3a ENSDARG00000056725 15668 2.446 - - - - - 0.871 0.819 - 0.756 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
65. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 2.437 - - - - - 0.902 0.759 - 0.776 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
66. sox14 ENSDARG00000070929 352 2.437 0.827 - - - - 0.718 0.892 - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
67. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.434 - - - - - 0.826 0.837 0.771 - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
68. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.432 - - - - - - 0.776 0.855 0.801 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
69. celf4 ENSDARG00000070045 1537 2.428 - - - - - 0.848 0.864 0.716 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
70. msi1 ENSDARG00000010710 2634 2.421 - 0.703 - - - 0.865 0.853 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
71. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.421 - - - - - 0.799 0.863 0.759 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
72. nova2 ENSDARG00000017673 7685 2.419 - - - - - 0.848 0.870 - 0.701 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
73. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.417 - - - - - 0.865 0.836 - 0.716
74. clstn3 ENSDARG00000073883 590 2.411 0.730 - - - - 0.815 0.866 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
75. st8sia5 ENSDARG00000036584 529 2.405 - 0.805 - - - - 0.871 0.729 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
76. cadm3 ENSDARG00000057013 1545 2.405 - - - - - 0.836 0.838 - 0.731 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
77. irx1a ENSDARG00000101831 644 2.4 - - - - - - 0.800 0.775 0.825 iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
78. itm2ca ENSDARG00000043448 1265 2.4 - - - - - 0.802 0.888 0.710 - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
79. negr1 ENSDARG00000021607 1051 2.4 - - - - - 0.830 0.811 - 0.759 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
80. dync1i1 ENSDARG00000060948 554 2.398 - - - - - 0.788 0.827 - 0.783 dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
81. tox ENSDARG00000032317 9126 2.397 - - - - - 0.712 0.870 - 0.815 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
82. si:ch73-21g5.7 ENSDARG00000093156 9412 2.395 - - - - - 0.717 0.878 0.800 - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
83. her12 ENSDARG00000032963 754 2.389 - - - - - 0.818 0.823 0.748 - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
84. pcdh18a ENSDARG00000089805 1096 2.389 - - - - - 0.789 0.887 0.713 - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
85. TMEM151A ENSDARG00000077986 78 2.388 - 0.850 - - - 0.797 0.741 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
86. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.386 - - - - - 0.829 0.847 - 0.710 neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
87. fez1 ENSDARG00000023174 701 2.385 - - - - - - 0.772 0.866 0.747 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
88. fzd3a ENSDARG00000021664 1958 2.383 - - - - - 0.780 0.800 - 0.803 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
89. TMEM57 TMEM57 260 2.382 - - - - - - 0.827 0.720 0.835
90. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 2.382 - 0.860 - - - 0.706 0.816 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
91. pou3f2a ENSDARG00000070220 817 2.376 - - - - - - 0.795 0.830 0.751 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
92. rims2b ENSDARG00000102690 275 2.376 0.761 - - - - 0.821 0.794 - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
93. si:ch211-202e12.3 401 2.373 - - - - - 0.787 - 0.822 0.764 si:ch211-202e12.3, transcript variant X6
94. necab2 ENSDARG00000056745, ENSDARG00000110976 304 2.369 - - - - - 0.839 0.757 0.773 - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
95. zbtb18 ENSDARG00000028228 3653 2.368 - - - - - 0.813 - 0.750 0.805 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
96. fsd1 ENSDARG00000062017 207 2.363 - - - - - 0.799 0.795 0.769 - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
97. pcdh19 ENSDARG00000034344 2378 2.363 - - - - - - 0.748 0.793 0.822 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
98. lhx1a ENSDARG00000014018 958 2.361 - - - - - 0.777 0.825 - 0.759 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
99. tmpob ENSDARG00000022978 8121 2.359 - - - - - 0.758 0.818 - 0.783 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
100. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.358 - - - - - 0.844 0.806 - 0.708 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]

There are 2432 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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