Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cry4

Gene Name Gene ID Reads Annotation
cry4 ENSDARG00000011890 980 cryptochrome circadian clock 4 [Source:ZFIN;Acc:ZDB-GENE-010426-7]










Genes with expression patterns similar to cry4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cry4 ENSDARG00000011890 980 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cryptochrome circadian clock 4 [Source:ZFIN;Acc:ZDB-GENE-010426-7]
2. tp53i11b ENSDARG00000006025 569 2.373 - - - 0.712 - - - 0.722 0.939 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
3. endog ENSDARG00000058865 679 1.755 - - - - - - 0.816 - 0.939 endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
4. ERBB4_1 ERBB4_1 1064 1.696 - 0.799 - - - - - - 0.897
5. cog2 ENSDARG00000004037 462 1.685 - - - - - 0.753 - - 0.932 component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
6. gba2 ENSDARG00000061472 171 1.672 - - - - - 0.732 - - 0.940 glucosidase, beta (bile acid) 2 [Source:ZFIN;Acc:ZDB-GENE-070522-3]
7. mov10b.1 ENSDARG00000061177 370 1.669 - - - - - - - 0.732 0.937 Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
8. mto1 ENSDARG00000055679 859 1.663 - - - - - - - 0.722 0.941 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
9. ano5a ENSDARG00000015731 601 1.659 - - - - - 0.710 - - 0.949 anoctamin 5a [Source:ZFIN;Acc:ZDB-GENE-091013-2]
10. cx35.4 ENSDARG00000042866 685 1.653 - - - - - - - 0.792 0.861 connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
11. tbp ENSDARG00000014994 1591 1.65 - - - - - 0.751 - - 0.899 TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
12. lrp1bb ENSDARG00000061517 172 1.649 - - 0.711 - - - - - 0.938 low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
13. yrk ENSDARG00000004378 618 1.644 - 0.753 - - - - - - 0.891 Yes-related kinase [Source:ZFIN;Acc:ZDB-GENE-030131-9517]
14. speg speg 334 1.638 - - - 0.865 - 0.773 - - -
15. cstf2_1 ENSDARG00000090788 709 1.633 - 0.713 - - - - - - 0.920 cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]
16. slc25a39 ENSDARG00000007449 630 1.628 - 0.706 - - - - - - 0.922 solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
17. FBXW7 ENSDARG00000060994 1675 1.619 - - - - - 0.707 - - 0.912 F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
18. rnf175 ENSDARG00000037647 1233 1.616 - - 0.712 - - - - - 0.904 ring finger protein 175 [Source:ZFIN;Acc:ZDB-GENE-040426-1104]
19. dus3l ENSDARG00000099528 1192 1.615 - - - - - - - 0.714 0.901 dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
20. si:dkey-91i10.2 ENSDARG00000074034 334 1.608 0.716 - - - - - - - 0.892 si:dkey-91i10.2 [Source:ZFIN;Acc:ZDB-GENE-050208-441]
21. b3gnt5a ENSDARG00000018971 938 1.6 - - - - - - - 0.745 0.855 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-030131-8470]
22. pelo ENSDARG00000055477 1927 1.6 - 0.732 - - - - - - 0.868 pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
23. galnt6 ENSDARG00000014386 1126 1.597 - - - - - 0.703 - - 0.894 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) [Source:ZFIN;Acc:ZDB-GENE-040426-2272]
24. kdelc1 ENSDARG00000031971, ENSDARG00000109619, ENSDARG00000112803 249 1.595 - - - - - - 0.846 0.749 - KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-878]
25. gadd45g gadd45g 510 1.586 - - - - - 0.796 0.790 - -
26. BX539313.4 BX539313.4 1858 1.576 - - - - - 0.779 0.797 - -
27. slka ENSDARG00000061525 1678 1.574 - - - - - 0.712 - - 0.862 STE20-like kinase a [Source:ZFIN;Acc:ZDB-GENE-050411-66]
28. rabep1 ENSDARG00000059600, ENSDARG00000110933 1003 1.566 - - - - - 0.747 0.819 - - rabaptin, RAB GTPase binding effector protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-165]
29. traf6 ENSDARG00000028058 478 1.565 - - - 0.747 - - - - 0.818 TNF receptor-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5735]
30. rab27a ENSDARG00000103935 1173 1.552 - - - - - 0.713 - - 0.839 RAB27A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050913-46]
31. nrg2b ENSDARG00000086585 100 1.55 0.770 - - - - - - 0.780 - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
32. mitfa ENSDARG00000003732 1288 1.544 - 0.768 - - - 0.776 - - - microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]
33. efnb3a ENSDARG00000112993 399 1.544 0.767 - - - - - - 0.777 - ephrin-B3a [Source:ZFIN;Acc:ZDB-GENE-100316-1]
34. col27a1a 1747 1.541 - 0.708 - - - - - - 0.833 collagen, type XXVII, alpha 1a
35. ppt2 ENSDARG00000104542 888 1.54 - 0.727 - - - - 0.813 - - palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
36. alg9 ENSDARG00000012840 631 1.537 - - - 0.824 - - - 0.713 - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
37. crebbpa ENSDARG00000104609 1739 1.521 - - - 0.705 - - - - 0.816 CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
38. CASS4 ENSDARG00000006775 760 1.493 - - - 0.745 - - - 0.748 - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
39. pogzb ENSDARG00000076542, ENSDARG00000113904 787 1.492 - 0.778 - - - - 0.714 - - pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3]
40. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.491 0.725 0.766 - - - - - - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
41. zgc:174906 ENSDARG00000075314 2187 1.489 - 0.732 - - - - - - 0.757 zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
42. asic1b ENSDARG00000101866 61 1.483 - - 0.706 0.777 - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
43. CABZ01117079.1 CABZ01117079.1 123 1.481 - - - 0.748 - - - 0.733 -
44. mirlet7i 192 1.469 - - - 0.741 - 0.728 - - - microRNA let-7i
45. lipt1 ENSDARG00000025233 385 1.461 - 0.710 - 0.751 - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
46. nrxn2b ENSDARG00000063150 343 1.454 0.736 - - 0.718 - - - - - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
47. nrd1 nrd1 324 1.447 - - - 0.701 - - - 0.746 -
48. eif4e2 ENSDARG00000038585 2116 1.444 - - - - - 0.729 0.715 - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
49. tpm1 ENSDARG00000087402 1666 1.438 - - - - - 0.723 0.715 - - tropomyosin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-854]
50. echs1 ENSDARG00000001578 3733 1.429 - - - - - - 0.703 0.726 - enoyl CoA hydratase, short chain, 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-617]
51. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 1.425 0.713 - - - - 0.712 - - - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
52. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.419 - - - - - - 0.700 - 0.719 mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
53. klhl21 ENSDARG00000039255 2550 1.41 - - - - - 0.701 0.709 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
54. pank4 ENSDARG00000098453, ENSDARG00000114951 662 0.953 - - - - - - - - 0.953 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
55. tradd ENSDARG00000036057, ENSDARG00000117083 1583 0.953 - - - - - - - - 0.953 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
56. glsb ENSDARG00000040705 1439 0.952 - - - - - - - - 0.952 glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
57. lypd6b ENSDARG00000077643 650 0.95 - - - - - - - - 0.950 LY6/PLAUR domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-050522-38]
58. kti12 ENSDARG00000054301, ENSDARG00000112513, ENSDARG00000114091 382 0.949 - - - - - - - - 0.949 KTI12 chromatin associated homolog [Source:ZFIN;Acc:ZDB-GENE-060825-174]
59. casp2 ENSDARG00000062052 559 0.948 - - - - - - - - 0.948 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
60. nfu1 ENSDARG00000068125 1743 0.947 - - - - - - - - 0.947 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
61. gpr1 ENSDARG00000101366 733 0.947 - - - - - - - - 0.947 G protein-coupled receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091204-457]
62. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.945 - - - - - - - - 0.945 tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
63. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.945 - - - - - - - - 0.945 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
64. rnf165a ENSDARG00000077906 133 0.944 - - - - - - - - 0.944 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
65. per1b ENSDARG00000012499 320 0.944 - - - - - - - - 0.944 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
66. si:ch211-195h23.3 ENSDARG00000068431 322 0.944 - - - - - - - - 0.944 si:ch211-195h23.3 [Source:ZFIN;Acc:ZDB-GENE-070912-174]
67. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.944 - - - - - - - - 0.944 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
68. PFKL_1 PFKL_1 298 0.943 - - - - - - - - 0.943
69. eve1 ENSDARG00000056012 144 0.943 - - - - - - - - 0.943 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
70. nxnl2 ENSDARG00000003934 386 0.943 - - - - - - - - 0.943 nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
71. dlx4b ENSDARG00000071560 446 0.943 - - - - - - - - 0.943 distal-less homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-990415-50]
72. trim33l ENSDARG00000086126 241 0.943 - - - - - - - - 0.943 tripartite motif containing 33, like [Source:ZFIN;Acc:ZDB-GENE-030131-5695]
73. KIF2A_1 ENSDARG00000043571 189 0.943 - - - - - - - - 0.943 kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
74. FAM83H FAM83H 190 0.942 - - - - - - - - 0.942
75. CABZ01063402.1 CABZ01063402.1 64 0.942 - - - - - - - - 0.942
76. myo18ab ENSDARG00000061862 124 0.942 - - - - - - - - 0.942 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
77. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 0.942 - - - - - - - - 0.942 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
78. si:ch211-232i5.1 ENSDARG00000078072 1337 0.942 - - - - - - - - 0.942 si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
79. CR388047.3 ENSDARG00000117023 89 0.942 - - - - - - - - 0.942
80. GRAMD2 GRAMD2 300 0.942 - - - - - - - - 0.942
81. ACBD3 ENSDARG00000042623 159 0.942 - - - - - - - - 0.942 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
82. si:ch211-89o5.1 si:ch211-89o5.1 91 0.942 - - - - - - - - 0.942
83. rnf170 ENSDARG00000104069 838 0.942 - - - - - - - - 0.942 ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
84. galnt11 ENSDARG00000063636 1188 0.942 - - - - - - - - 0.942 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]
85. si:dkey-246e3.4 ENSDARG00000086390 50 0.942 - - - - - - - - 0.942 si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
86. CT030712.1 ENSDARG00000044355 83 0.941 - - - - - - - - 0.941 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
87. taf3 ENSDARG00000045513 1819 0.941 - - - - - - - - 0.941 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto [Source:ZFIN;Acc:ZDB-GENE-030131-6406]
88. ERAP1_1 ERAP1_1 64 0.941 - - - - - - - - 0.941
89. enpp6 ENSDARG00000040469 187 0.941 - - - - - - - - 0.941 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
90. MIER3 MIER3 114 0.94 - - - - - - - - 0.940
91. b3gat2 ENSDARG00000030733 348 0.94 - - - - - - - - 0.940 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
92. stxbp3 ENSDARG00000008142 2604 0.94 - - - - - - - - 0.940 syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
93. smarcd2 ENSDARG00000088877 416 0.94 - - - - - - - - 0.940 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
94. calhm2 ENSDARG00000039482 138 0.939 - - - - - - - - 0.939 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
95. pdlim4 ENSDARG00000068973 2567 0.939 - - - - - - - - 0.939 PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
96. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.938 - - - - - - - - 0.938 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
97. TIMP4 TIMP4 599 0.938 - - - - - - - - 0.938
98. cadpsa ENSDARG00000043661 160 0.937 - - - - - - - - 0.937 Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
99. prmt10 prmt10 312 0.937 - - - - - - - - 0.937
100. zgc:153151 ENSDARG00000069563 126 0.936 - - - - - - - - 0.936 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]

There are 1143 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA