Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for crnkl1

Gene Name Gene ID Reads Annotation
crnkl1 ENSDARG00000007901 1952 crooked neck pre-mRNA splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-694]










Genes with expression patterns similar to crnkl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. crnkl1 ENSDARG00000007901 1952 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 crooked neck pre-mRNA splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-694]
2. proza ENSDARG00000037783, ENSDARG00000116864 500 1.548 - - - - - 0.749 0.799 - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
3. btr04 ENSDARG00000060962, ENSDARG00000095113 281 1.521 - - - - - 0.794 0.727 - - bloodthirsty-related gene family, member 4 [Source:ZFIN;Acc:ZDB-GENE-060825-109]
4. pgrmc2 ENSDARG00000030237, ENSDARG00000110406 791 1.517 - - - - - 0.812 0.705 - - progesterone receptor membrane component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2102]
5. TNS3 TNS3 1286 1.51 - 0.789 - - - - 0.721 - -
6. ppm1aa ENSDARG00000032155 1039 1.489 - 0.748 - 0.741 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Aa [Source:ZFIN;Acc:ZDB-GENE-991102-15]
7. PTP4A2 PTP4A2 185 1.483 - - - - - 0.733 0.750 - -
8. paxip1 ENSDARG00000005606 1417 1.478 - 0.712 - - - 0.766 - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
9. arl3 ENSDARG00000071409, ENSDARG00000113228 2130 1.478 - 0.723 - - - - 0.755 - - ADP-ribosylation factor-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7518]
10. rnf24 ENSDARG00000036965 226 1.462 - - - - - 0.719 0.743 - - ring finger protein 24 [Source:ZFIN;Acc:ZDB-GENE-041114-40]
11. CCDC117 CCDC117 412 1.461 - - - - - 0.723 0.738 - -
12. slc25a47a ENSDARG00000059923 1285 1.454 - - - - - 0.713 0.741 - - solute carrier family 25, member 47a [Source:ZFIN;Acc:ZDB-GENE-060616-266]
13. aldh5a1 ENSDARG00000076544, ENSDARG00000113300 1021 1.448 - - - 0.732 - 0.716 - - - aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-070228-2]
14. tmem33 ENSDARG00000041332 2883 1.448 - 0.727 - 0.721 - - - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
15. oxnad1 ENSDARG00000062664 2684 1.441 - 0.703 - - - - 0.738 - - oxidoreductase NAD-binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-199]
16. ppig ENSDARG00000044431 3427 1.441 - 0.734 0.707 - - - - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
17. rhogc ENSDARG00000028401 2671 1.437 - - - 0.735 - - 0.702 - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
18. taf10 ENSDARG00000068641 3333 1.43 - 0.705 - - - 0.725 - - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
19. mut ENSDARG00000060554 420 0.878 - - - - - - 0.878 - - methylmalonyl CoA mutase [Source:ZFIN;Acc:ZDB-GENE-010430-3]
20. emc9 ENSDARG00000034633 686 0.867 - - - - - 0.867 - - - ER membrane protein complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-040426-693]
21. BX510999.1 BX510999.1 412 0.866 - - - - - 0.866 - - -
22. SLC41A2 SLC41A2 202 0.863 - - - - - - 0.863 - -
23. hoxc11a ENSDARG00000070351 1783 0.862 - - - - - - 0.862 - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
24. bpnt1 ENSDARG00000043684 78 0.862 - - - - - - 0.862 - - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
25. STARD7 ENSDARG00000074858 889 0.855 - - - - - - 0.855 - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
26. REXO4 ENSDARG00000088619 655 0.854 - - - - - - 0.854 - - REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
27. rbl1 ENSDARG00000008141 1217 0.851 - - - - - - 0.851 - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
28. elp2 ENSDARG00000017199 399 0.848 - - - - - - 0.848 - - elongator acetyltransferase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060503-525]
29. erbb2ip 403 0.847 - - - - - - 0.847 - - erbb2 interacting protein, transcript variant X3
30. SCML2 ENSDARG00000012949 1310 0.846 - - - - - 0.846 - - - Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
31. CU915814.1 CU915814.1 245 0.844 - - - - - - 0.844 - -
32. tmem248 ENSDARG00000018825 1560 0.843 - - - - - - 0.843 - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
33. cept1b ENSDARG00000021177 675 0.842 - - - - - - 0.842 - - choline/ethanolamine phosphotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-071004-33]
34. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 0.841 - - - - - - 0.841 - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
35. fbp1a ENSDARG00000021366 1778 0.841 - - - - - 0.841 - - - fructose-1,6-bisphosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7171]
36. hook1 ENSDARG00000042946 452 0.838 - - - - - - 0.838 - - hook microtubule-tethering protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-159]
37. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 0.837 - - - - - - 0.837 - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
38. gtpbp4 ENSDARG00000018961 5323 0.837 - - - - - - 0.837 - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
39. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 0.835 - - - - - - 0.835 - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
40. CASKIN2_1 CASKIN2_1 2299 0.835 - - - - - - 0.835 - -
41. ephb3a ENSDARG00000031548 1872 0.832 - - - 0.832 - - - - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
42. si:ch211-270n8.4 87 0.831 - - - - - - 0.831 - - si:ch211-270n8.4
43. nol6 ENSDARG00000059711, ENSDARG00000115621 853 0.831 - - - - - - 0.831 - - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
44. prpsap2 ENSDARG00000019326 1463 0.831 - - - - - - 0.831 - - phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
45. triobp triobp 455 0.83 - - - - - - 0.830 - -
46. kif23 ENSDARG00000014943, ENSDARG00000116561 845 0.83 - - - - - - 0.830 - - kinesin family member 23 [Source:ZFIN;Acc:ZDB-GENE-991019-4]
47. ARG1 ENSDARG00000057429, ENSDARG00000110741 45 0.83 - - - - - - 0.830 - - arginase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-181]
48. nanos1 ENSDARG00000109337 2494 0.829 - - - - - - 0.829 - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
49. tbl3 ENSDARG00000052344 1530 0.829 - - - - - - 0.829 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
50. TRIM14_7 TRIM14_7 381 0.828 - - - - - - 0.828 - -
51. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 0.828 - - - 0.828 - - - - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
52. atp6v0cb ENSDARG00000036577 3472 0.827 - 0.827 - - - - - - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
53. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.827 - - - - - - 0.827 - - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
54. thyn1 ENSDARG00000042659, ENSDARG00000113223 459 0.826 - - - - - - 0.826 - - thymocyte nuclear protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1585]
55. prim1 ENSDARG00000040163 909 0.825 - - - 0.825 - - - - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
56. ngdn ENSDARG00000045372 782 0.825 - - - - - - 0.825 - - neuroguidin, EIF4E binding protein [Source:ZFIN;Acc:ZDB-GENE-031030-13]
57. setd8a 2549 0.824 - 0.824 - - - - - - - SET domain containing (lysine methyltransferase) 8a
58. dynlt1 ENSDARG00000045909 2451 0.824 - - - - - - 0.824 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
59. CABZ01080457.1 CABZ01080457.1 445 0.823 - - - - - - 0.823 - -
60. srd5a3 ENSDARG00000043307 142 0.823 - - - - - - 0.823 - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
61. tesk2 ENSDARG00000061450 261 0.821 - - - - - - 0.821 - - testis associated actin remodelling kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070209-68]
62. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.821 - - - - - - 0.821 - - ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
63. aif1l ENSDARG00000009336 1340 0.821 - - - - - 0.821 - - - allograft inflammatory factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9646]
64. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 0.82 - - - - - - 0.820 - - protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
65. si:ch73-61d6.3 ENSDARG00000057826 274 0.82 - - - - - - 0.820 - - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
66. zgc:65772 zgc:65772 2092 0.819 - - - 0.819 - - - - -
67. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 0.819 - - - - - - 0.819 - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
68. CR774186.2 CR774186.2 104 0.818 - - - - - - 0.818 - -
69. meis3 ENSDARG00000002795 2509 0.817 - - - - - - 0.817 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
70. zgc:112998 ENSDARG00000079760 380 0.817 - - - - - - 0.817 - - zgc:112998 [Source:ZFIN;Acc:ZDB-GENE-050320-134]
71. HOMEZ HOMEZ 1824 0.816 - - - - - 0.816 - - -
72. GPR31 431 0.816 - 0.816 - - - - - - - G protein-coupled receptor 31
73. exoc3l4 ENSDARG00000058180 923 0.815 - - - - - - 0.815 - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
74. lgalsla ENSDARG00000059060 512 0.815 - - - - - 0.815 - - - lectin, galactoside-binding-like a [Source:ZFIN;Acc:ZDB-GENE-060616-24]
75. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 0.815 - - - - - - 0.815 - - RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
76. tulp4 tulp4 1520 0.815 - - - - - 0.815 - - -
77. xpo6 ENSDARG00000041217, ENSDARG00000112616 735 0.814 - - - - - 0.814 - - - exportin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5912]
78. fbxl5 ENSDARG00000043046 1403 0.814 - - - - - 0.814 - - - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
79. gigfy2 3194 0.814 - 0.814 - - - - - - - GRB10 interacting GYF protein 2, transcript variant X1
80. CZv9_NA991H1orf52 CZv9_NA991H1orf52 1723 0.813 - - - 0.813 - - - - -
81. ARHGEF25 ARHGEF25 1159 0.813 - - - - - - 0.813 - -
82. sorbs2a ENSDARG00000003046 242 0.812 - - - 0.812 - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
83. rabl6 rabl6 489 0.812 - - - - - - 0.812 - -
84. acy1 ENSDARG00000038475, ENSDARG00000111129 576 0.812 - 0.812 - - - - - - - aminoacylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-755]
85. APOLD1_1 APOLD1_1 590 0.812 - - - - - - 0.812 - -
86. cdipt ENSDARG00000070686 1318 0.81 - - - - - - 0.810 - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
87. ufl1 ENSDARG00000007496 177 0.81 - - - - - 0.810 - - - UFM1-specific ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1163]
88. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 0.809 - - - - - 0.809 - - - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
89. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 0.808 - - - - - - 0.808 - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
90. dhrs11a ENSDARG00000046090, ENSDARG00000112531 411 0.808 - - - - - 0.808 - - - dehydrogenase/reductase (SDR family) member 11a [Source:ZFIN;Acc:ZDB-GENE-060929-324]
91. rxraa ENSDARG00000057737 750 0.808 - - - - - - 0.808 - - retinoid X receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-070314-2]
92. nt5dc2 ENSDARG00000059646 3878 0.808 - - - - - - 0.808 - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
93. NAPB NAPB 694 0.807 - 0.807 - - - - - - -
94. nup35 ENSDARG00000012222 1212 0.807 - 0.807 - - - - - - - nucleoporin 35 [Source:ZFIN;Acc:ZDB-GENE-030131-9407]
95. odz4 odz4 822 0.807 - - - 0.807 - - - - -
96. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 0.807 - - - - - - 0.807 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
97. WDFY3 ENSDARG00000078890 2092 0.806 - - - - - - 0.806 - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
98. itpka ENSDARG00000042856, ENSDARG00000115453 391 0.806 - - - - - 0.806 - - - inositol-trisphosphate 3-kinase A [Source:ZFIN;Acc:ZDB-GENE-030616-116]
99. nanos3 ENSDARG00000068255 319 0.806 - - - - - - 0.806 - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
100. aar2 ENSDARG00000018658 297 0.805 - - - - - - 0.805 - - AAR2 splicing factor homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040704-68]

There are 775 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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