Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for crmp1

Gene Name Gene ID Reads Annotation
crmp1 ENSDARG00000056742 332 collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]










Genes with expression patterns similar to crmp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. crmp1 ENSDARG00000056742 332 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
2. nipa1 ENSDARG00000055917 132 2.476 0.932 0.739 - - 0.805 - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
3. ddx42 ENSDARG00000037928 1659 2.387 0.704 - - - - 0.712 - 0.971 - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
4. mamdc1 mamdc1 156 2.309 - 0.782 - - 0.826 0.701 - - -
5. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1.821 0.932 - - - - - 0.889 - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
6. zgc:171566 ENSDARG00000105118 340 1.802 - - - - - 0.814 - 0.988 - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
7. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.778 - 0.931 - - - 0.847 - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
8. uros ENSDARG00000027491 1147 1.771 - - - - - 0.822 - 0.949 - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
9. gabpb1 ENSDARG00000023659 26 1.771 0.932 - - - 0.839 - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
10. BX548000.1 ENSDARG00000099044 45 1.763 0.932 - - - 0.831 - - - -
11. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1.746 0.932 - - - - 0.814 - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
12. gng2_1 ENSDARG00000056831 113 1.743 - 0.931 - - - 0.812 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
13. gsdf ENSDARG00000075301 6 1.737 - 0.931 - - - - 0.806 - - gonadal somatic cell derived factor [Source:ZFIN;Acc:ZDB-GENE-101029-3]
14. si:dkey-199m13.2 si:dkey-199m13.2 31 1.737 - 0.931 - - - - 0.806 - -
15. phf3 ENSDARG00000034768 1372 1.737 - - - - - 0.754 - 0.983 - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
16. slc44a1a ENSDARG00000015946 10 1.737 - 0.931 - - - - 0.806 - - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
17. ubxn6 ENSDARG00000003087, ENSDARG00000113404 431 1.732 - - - - - 0.744 - 0.988 - UBX domain protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5680]
18. TTBK1_1 TTBK1_1 132 1.732 - - - - 0.839 0.893 - - -
19. PMFBP1 ENSDARG00000101917 292 1.728 0.900 - - - - 0.828 - - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
20. BX004890.2 BX004890.2 84 1.721 0.901 - - - - 0.820 - - -
21. cx34.4 ENSDARG00000075854 168 1.719 - 0.927 - - - 0.792 - - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
22. gpr133 gpr133 83 1.715 - 0.903 - - - 0.812 - - -
23. marveld3 ENSDARG00000099654 113 1.714 - 0.826 - - - 0.888 - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
24. cacna1c ENSDARG00000008398 193 1.712 - - - - - 0.835 0.877 - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
25. wdr65 wdr65 251 1.711 0.722 - - - - - - 0.989 -
26. polb ENSDARG00000003749 2049 1.709 - - - - - 0.735 - 0.974 - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
27. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 1.707 0.886 - - - - 0.821 - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
28. eno2 ENSDARG00000014287 2162 1.7 - - - - - 0.723 - 0.977 - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
29. si:dkey-81p22.11 ENSDARG00000093797 68 1.7 - - - - - 0.819 0.881 - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
30. rdh12 ENSDARG00000018069 396 1.698 - 0.817 - - - 0.881 - - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
31. SLC44A1 SLC44A1 43 1.692 - 0.886 - - - - 0.806 - -
32. CABZ01069519.1 CABZ01069519.1 64 1.689 - 0.923 - - - - 0.766 - -
33. msxe msxe 362 1.684 - 0.822 - - - 0.862 - - -
34. ADCYAP1R1 ADCYAP1R1 118 1.67 0.875 - - - - 0.795 - - -
35. eng2b eng2b 865 1.667 - - - - - - - 0.937 0.730
36. herc3 ENSDARG00000075887 41 1.666 0.816 - - - - - 0.850 - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
37. nr2e1 ENSDARG00000017107 340 1.664 0.932 - - - - - - - 0.732 nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
38. tbc1d22b ENSDARG00000026988 18 1.658 - 0.931 0.727 - - - - - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
39. XKR7 ENSDARG00000026333 175 1.655 - - - - - 0.841 0.814 - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
40. smarca5 ENSDARG00000052348 15433 1.648 - - - - - - - 0.910 0.738 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
41. ENSDARG00000076126 ENSDARG00000076126 100 1.648 - - - - - 0.826 0.822 - -
42. CABZ01071446.1 CABZ01071446.1 4 1.645 0.839 - - - - - 0.806 - -
43. C3H16orf89 C3H16orf89 449 1.644 0.932 - 0.712 - - - - - -
44. si:dkey-114c15.5 ENSDARG00000095150 70 1.634 0.825 - - - - 0.809 - - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
45. dhrs1 ENSDARG00000054300, ENSDARG00000116842 555 1.632 0.796 - - - - 0.836 - - - dehydrogenase/reductase (SDR family) member 1 [Source:ZFIN;Acc:ZDB-GENE-030616-591]
46. st6galnac5a ENSDARG00000039220 76 1.626 0.800 - - - - 0.826 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
47. GCNT7 ENSDARG00000040608 91 1.625 0.881 0.744 - - - - - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
48. mvb12ba ENSDARG00000091619 18 1.617 - 0.877 0.740 - - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
49. prr14 ENSDARG00000089232 495 1.613 - 0.858 - - 0.755 - - - - proline rich 14 [Source:ZFIN;Acc:ZDB-GENE-030131-3785]
50. CD81 CD81 67 1.609 - - - - - 0.799 0.810 - -
51. fignl1 ENSDARG00000016427 636 1.604 - 0.774 - - - 0.830 - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
52. si:ch211-245h7.2 si:ch211-245h7.2 317 1.603 0.820 0.783 - - - - - - -
53. si:dkey-104n9.1 ENSDARG00000093042 41 1.599 0.791 0.808 - - - - - - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
54. r3hdm1 ENSDARG00000101458 5241 1.598 - - - - - - - 0.836 0.762 R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
55. si:dkey-264b2.3 19 1.596 - - - - - 0.790 0.806 - - si:dkey-264b2.3, transcript variant X2
56. si:ch73-362m14.4 ENSDARG00000023940 88 1.595 - - - - - 0.753 0.842 - - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
57. camk2n2 ENSDARG00000111102 69 1.589 0.848 - - - 0.741 - - - - calcium/calmodulin-dependent protein kinase II inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-389]
58. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.581 - - - - - 0.817 - - 0.764 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
59. ppp2r2ba 321 1.581 - - - - - 0.847 0.734 - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
60. pidd pidd 86 1.577 - 0.747 - - - - 0.830 - -
61. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.573 - - - - 0.713 0.860 - - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
62. BX548160.2 BX548160.2 108 1.566 0.850 - - - - - 0.716 - -
63. TTYH1 ENSDARG00000076804 399 1.561 - - - - - 0.760 - - 0.801 tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
64. wu:fb30e12 wu:fb30e12 1254 1.559 - - 0.786 - - 0.773 - - -
65. nexmifb ENSDARG00000029296 416 1.555 - - - - - 0.797 - - 0.758 neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
66. zgc:162160 ENSDARG00000060259 117 1.555 - - 0.730 - - 0.825 - - - zgc:162160 [Source:ZFIN;Acc:ZDB-GENE-070424-22]
67. unc119b ENSDARG00000044362 1528 1.553 - - - - - 0.833 - - 0.720 unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
68. pknox2 ENSDARG00000055349 784 1.551 - - - - - 0.779 - 0.772 - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
69. si:dkeyp-53d3.6 204 1.544 0.816 - - - - 0.728 - - - si:dkeyp-53d3.6, transcript variant X1
70. chd5 ENSDARG00000105083 132 1.542 - - - - - - 0.806 - 0.736 chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
71. DSCAML1 ENSDARG00000098057 321 1.542 - - - - - 0.835 - - 0.707 Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
72. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 1.541 0.839 0.702 - - - - - - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
73. si:dkey-270b7.1 si:dkey-270b7.1 83 1.537 - - - 0.701 - 0.836 - - -
74. desi1a ENSDARG00000033140 92 1.529 0.778 - 0.751 - - - - - - desumoylating isopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1657]
75. psmb5 ENSDARG00000075445, ENSDARG00000111880 126 1.521 - - - - 0.765 - 0.756 - - proteasome subunit beta 5 [Source:ZFIN;Acc:ZDB-GENE-990415-215]
76. zgc:92590 ENSDARG00000040282 13 1.519 0.713 - - - - - 0.806 - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
77. si:ch73-248e21.5 ENSDARG00000088283 19 1.514 - 0.744 0.770 - - - - - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
78. mapk8ip2 ENSDARG00000063157 467 1.51 - - 0.711 - - 0.799 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
79. CR936200.1 CR936200.1 327 1.509 - 0.712 - - - 0.797 - - -
80. bcl11ab ENSDARG00000063153 3032 1.508 - - - - - 0.754 - - 0.754 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
81. ELMO2 ENSDARG00000063527 301 1.506 - - - - 0.710 0.796 - - - engulfment and cell motility 2 [Source:ZFIN;Acc:ZDB-GENE-140106-84]
82. efna2 efna2 428 1.504 - - - - - 0.749 - - 0.755
83. si:dkeyp-79c2.1 42 1.501 - - - - - 0.754 0.747 - - si:dkeyp-79c2.1, transcript variant X2
84. TESK1 TESK1 109 1.497 - - 0.703 - - 0.794 - - -
85. rltpr 258 1.491 - - - - - 0.777 0.714 - - RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
86. emp1 ENSDARG00000069632 251 1.489 - - - - 0.746 0.743 - - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
87. bscl2 ENSDARG00000037008 429 1.487 - - - - 0.701 0.786 - - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
88. stap2a ENSDARG00000092810 591 1.486 - - - - - 0.755 - - 0.731 signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
89. mir133a-1 77 1.48 - 0.709 - - - 0.771 - - - microRNA 133a-1
90. CR855996.2 ENSDARG00000104450 310 1.477 0.757 - - - 0.720 - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
91. avpr1b avpr1b 58 1.475 - - 0.755 - - 0.720 - - -
92. CYTH2 ENSDARG00000028800 2349 1.472 - - - - - 0.764 - - 0.708 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
93. dpysl5a ENSDARG00000011141 1827 1.461 - - - - - 0.715 - - 0.746 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
94. npffr1l2 ENSDARG00000062631 127 1.458 - - - - - 0.712 0.746 - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
95. nadl1.2 695 1.458 - - - - - 0.753 0.705 - - neural adhesion molecule L1.2, transcript variant X1
96. ttc9b ENSDARG00000068421 251 1.449 - - - - - 0.705 - - 0.744 tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
97. phgdh ENSDARG00000001873 8325 1.439 - - - - - 0.719 - 0.720 - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
98. gata2a ENSDARG00000059327 326 1.437 - - - - 0.710 - - - 0.727 GATA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-260]
99. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.432 - - - - - 0.701 - 0.731 - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
100. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.421 - - - - - 0.714 - - 0.707 LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]

There are 2110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA