Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for crlf3

Gene Name Gene ID Reads Annotation
crlf3 ENSDARG00000070261 904 cytokine receptor-like factor 3 [Source:ZFIN;Acc:ZDB-GENE-050417-354]










Genes with expression patterns similar to crlf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. crlf3 ENSDARG00000070261 904 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cytokine receptor-like factor 3 [Source:ZFIN;Acc:ZDB-GENE-050417-354]
2. WIPF2 WIPF2 3171 2.294 - - - 0.745 - 0.760 0.789 - -
3. cyp2v1 ENSDARG00000018485 694 1.757 - 0.885 - 0.872 - - - - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
4. dhrs13a.2 ENSDARG00000111240 491 1.671 0.859 - - - - - - 0.812 - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
5. zgc:136851 zgc:136851 315 1.657 - 0.892 - - - - 0.765 - -
6. immp1l ENSDARG00000045935 175 1.644 - - - 0.843 - - - 0.801 - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]
7. si:dkeyp-89c11.3 si:dkeyp-89c11.3 343 1.633 - 0.901 - - - - 0.732 - -
8. csad ENSDARG00000026348 1461 1.628 - 0.892 - - - - 0.736 - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
9. RNF130 ENSDARG00000089767 559 1.625 - 0.773 - - - - - 0.852 - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
10. rnf113a ENSDARG00000037930 849 1.622 - - - 0.790 - - - 0.832 - ring finger protein 113A [Source:ZFIN;Acc:ZDB-GENE-040825-1]
11. tmem184a ENSDARG00000104538 661 1.618 - 0.913 - - - 0.705 - - - transmembrane protein 184a [Source:ZFIN;Acc:ZDB-GENE-040426-2925]
12. NBR1 NBR1 752 1.61 - 0.755 - 0.855 - - - - -
13. cmasb 499 1.606 - 0.828 - - - - - 0.778 - cytidine monophosphate N-acetylneuraminic acid synthetase b
14. MTHFS ENSDARG00000104487 770 1.605 - - - 0.742 - 0.863 - - - 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) [Source:ZFIN;Acc:ZDB-GENE-130103-5]
15. acot8 ENSDARG00000014138 89 1.596 - - - - - - 0.822 0.774 - acyl-CoA thioesterase 8 [Source:ZFIN;Acc:ZDB-GENE-041010-174]
16. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.585 - 0.834 - 0.751 - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
17. nrp2b ENSDARG00000038446 783 1.578 - 0.713 - 0.865 - - - - - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
18. snapc5 ENSDARG00000062476 1024 1.571 - 0.771 - 0.800 - - - - - small nuclear RNA activating complex, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-041111-50]
19. ormdl2 ENSDARG00000058022 1146 1.569 - 0.813 - - - - 0.756 - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
20. kcnj1a.5 ENSDARG00000089060 617 1.568 - 0.760 - - - - 0.808 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-050420-120]
21. wnt6b ENSDARG00000073935 236 1.568 - 0.838 - - - - 0.730 - - wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
22. acap1 ENSDARG00000056346, ENSDARG00000109603 274 1.565 - - - 0.847 - - - 0.718 - ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1242]
23. sptssa ENSDARG00000071203 2306 1.564 - 0.771 - 0.793 - - - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
24. fam57ba ENSDARG00000026875 504 1.563 - 0.771 - 0.792 - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
25. dhrs13a.1 ENSDARG00000026322 336 1.562 - 0.817 - - - - 0.745 - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-58]
26. abhd16a ENSDARG00000078929 1115 1.561 - 0.715 - - - - 0.846 - - abhydrolase domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-010601-2]
27. haao ENSDARG00000076487 143 1.548 0.758 - - - - - - 0.790 - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
28. morc3a ENSDARG00000056679 648 1.548 - - - 0.804 - - - 0.744 - MORC family CW-type zinc finger 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1502]
29. aco1 ENSDARG00000026376 5034 1.534 - 0.762 - - - - 0.772 - - aconitase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-031118-76]
30. cars ENSDARG00000036164 2019 1.534 - - - 0.803 - - - 0.731 - cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
31. ptprk ENSDARG00000063416 742 1.534 - - - 0.790 - - 0.744 - - protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
32. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 1.534 - 0.719 - - - - - 0.815 - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
33. mogat3b ENSDARG00000003635 394 1.533 - - - - - - 0.711 0.822 - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
34. dock5 ENSDARG00000001968 467 1.53 - - - 0.793 - - 0.737 - - dedicator of cytokinesis 5 [Source:ZFIN;Acc:ZDB-GENE-080108-4]
35. lamp2 ENSDARG00000014914 5035 1.528 - 0.795 - - - - 0.733 - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
36. tex261 ENSDARG00000044584 513 1.51 - 0.764 - - - - - 0.746 - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
37. fam105bb fam105bb 1253 1.492 - 0.762 - - - - 0.730 - -
38. ripk1l ENSDARG00000006677 593 1.491 - 0.774 - 0.717 - - - - - receptor (TNFRSF)-interacting serine-threonine kinase 1, like [Source:ZFIN;Acc:ZDB-GENE-070705-132]
39. si:dkey-240e12.6 ENSDARG00000110137 674 1.483 - 0.728 - - - - - 0.755 - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
40. zgc:91909 ENSDARG00000021287 1488 1.478 - - - - - - 0.755 0.723 - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
41. slc2a10 ENSDARG00000090820 637 1.469 - 0.722 - - - - - 0.747 - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
42. myo6a ENSDARG00000044016 847 1.468 - 0.738 - 0.730 - - - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
43. ctsh ENSDARG00000041108 2873 1.466 - 0.765 - - - - 0.701 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
44. chmp4b chmp4b 5318 1.45 - - - 0.721 - - 0.729 - -
45. zgc:112265 ENSDARG00000100406 339 1.442 - 0.703 - - - 0.739 - - - zgc:112265 [Source:ZFIN;Acc:ZDB-GENE-050626-133]
46. trim35-28 ENSDARG00000021021 1380 1.419 - - - - - 0.707 0.712 - - tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
47. rassf6 ENSDARG00000000804 1090 1.419 - 0.718 - - - - 0.701 - - Ras association (RalGDS/AF-6) domain family 6 [Source:ZFIN;Acc:ZDB-GENE-030616-513]
48. ubfd1 ENSDARG00000102827 966 1.418 - - - 0.711 - 0.707 - - - ubiquitin family domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050506-90]
49. eml2 ENSDARG00000008808 706 0.967 - 0.967 - - - - - - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
50. ARHGEF5 2727 0.929 - 0.929 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
51. PRSS16 ENSDARG00000076602 963 0.926 - 0.926 - - - - - - - serine protease 16 [Source:ZFIN;Acc:ZDB-GENE-070112-732]
52. sas sas 1783 0.926 - 0.926 - - - - - - -
53. mfsd11 ENSDARG00000102828 1043 0.919 - 0.919 - - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
54. gna12a ENSDARG00000025826 1769 0.918 - - - - - - 0.918 - - guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
55. usp12a ENSDARG00000078109 490 0.915 - 0.915 - - - - - - - ubiquitin specific peptidase 12a [Source:ZFIN;Acc:ZDB-GENE-060228-3]
56. MTMR4 1374 0.914 - 0.914 - - - - - - - myotubularin related protein 4, transcript variant X3
57. lingo4b ENSDARG00000078527 235 0.912 - - - 0.912 - - - - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
58. rab42a ENSDARG00000034215 692 0.91 - - - 0.910 - - - - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
59. tmem50a ENSDARG00000015757 3244 0.91 - 0.910 - - - - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
60. zdhhc9 ENSDARG00000060515 981 0.909 - 0.909 - - - - - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
61. BX548078.1 ENSDARG00000093780 1325 0.909 - 0.909 - - - - - - -
62. HYAL1 ENSDARG00000059916 134 0.908 - - - 0.908 - - - - - hyaluronoglucosaminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060312-42]
63. ICT1 356 0.907 - - - 0.907 - - - - - immature colon carcinoma transcript 1
64. si:ch211-51h9.7 ENSDARG00000074720 227 0.907 - 0.907 - - - - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
65. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 0.906 - 0.906 - - - - - - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
66. rab35 rab35 1287 0.905 - 0.905 - - - - - - -
67. CU019646.1 ENSDARG00000117632 223 0.903 - - - 0.903 - - - - - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
68. tbc1d1 ENSDARG00000062081, ENSDARG00000109222 1592 0.901 - - - - - - 0.901 - - TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060710-1]
69. rela ENSDARG00000098696 889 0.9 - - - 0.900 - - - - - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
70. TMEM54 TMEM54 1882 0.9 - 0.900 - - - - - - -
71. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.9 - 0.900 - - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
72. atr ENSDARG00000079625 231 0.898 - - - 0.898 - - - - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
73. map7d1b ENSDARG00000104701 1655 0.898 - 0.898 - - - - - - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
74. dedd1 ENSDARG00000002758 932 0.897 - 0.897 - - - - - - - death effector domain-containing 1 [Source:ZFIN;Acc:ZDB-GENE-000616-2]
75. wtap ENSDARG00000042642 1779 0.891 - 0.891 - - - - - - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
76. cdc20 ENSDARG00000100741 3264 0.89 - 0.890 - - - - - - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
77. EDEM3 ENSDARG00000074129 805 0.888 - 0.888 - - - - - - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
78. pex16 ENSDARG00000058202 486 0.888 - 0.888 - - - - - - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
79. SEC16B ENSDARG00000099554 411 0.887 - 0.887 - - - - - - - SEC16 homolog B, endoplasmic reticulum export factor [Source:ZFIN;Acc:ZDB-GENE-050208-274]
80. mpzl3 959 0.887 - 0.887 - - - - - - - myelin protein zero-like 3
81. ptprua ENSDARG00000092638 479 0.886 - - - 0.886 - - - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
82. ccdc22 ENSDARG00000052379 2276 0.886 - 0.886 - - - - - - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
83. prkag3b ENSDARG00000000369 1945 0.885 - - - 0.885 - - - - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
84. rassf9 ENSDARG00000074721 448 0.882 - - - 0.882 - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
85. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.881 - - - 0.881 - - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
86. CABZ01054965.1 ENSDARG00000090844 74 0.881 - - - 0.881 - - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
87. adam10b ENSDARG00000015502 26 0.88 - - - 0.880 - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
88. ptprz1b ENSDARG00000020871 435 0.88 - - - 0.880 - - - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
89. CRTC1 47 0.88 - - - 0.880 - - - - - CREB regulated transcription coactivator 1
90. si:dkey-16b10.3 si:dkey-16b10.3 21 0.88 - - - 0.880 - - - - -
91. zgc:92161 ENSDARG00000101749 27 0.879 - - - 0.879 - - - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
92. si:ch73-239k17.1 si:ch73-239k17.1 44 0.879 - - - 0.879 - - - - -
93. nudt5 ENSDARG00000078073 779 0.879 - 0.879 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
94. CD53 CD53 108 0.879 - - - 0.879 - - - - -
95. cmc1 ENSDARG00000103670 1197 0.878 - 0.878 - - - - - - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
96. ENSDARG00000092971 ENSDARG00000092971 563 0.878 - - - 0.878 - - - - -
97. ano1 ENSDARG00000102335 445 0.878 - 0.878 - - - - - - - anoctamin 1, calcium activated chloride channel [Source:ZFIN;Acc:ZDB-GENE-121127-3]
98. HELZ2_1 ENSDARG00000012600 53 0.877 - - - 0.877 - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
99. orai2 ENSDARG00000035148 330 0.877 - 0.877 - - - - - - - ORAI calcium release-activated calcium modulator 2 [Source:ZFIN;Acc:ZDB-GENE-060531-127]
100. zgc:114046 ENSDARG00000091728 68 0.876 - - - 0.876 - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]

There are 1114 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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