Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for crip1

Gene Name Gene ID Reads Annotation
crip1 ENSDARG00000053858 768 cysteine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-1]










Genes with expression patterns similar to crip1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. crip1 ENSDARG00000053858 768 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cysteine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-1]
2. cideb ENSDARG00000012640 620 1.519 0.781 - - - - - 0.738 - - cell death-inducing DFFA-like effector b [Source:ZFIN;Acc:ZDB-GENE-080514-2]
3. alkbh4 ENSDARG00000052247 306 1.456 - 0.715 - - - 0.741 - - - alkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
4. foxd2 ENSDARG00000058133 1150 1.406 - 0.704 - - - 0.702 - - - forkhead box D2 [Source:ZFIN;Acc:ZDB-GENE-980605-6]
5. acbd5a ENSDARG00000034883 300 0.885 - 0.885 - - - - - - - acyl-CoA binding domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-050522-268]
6. lrrc8a lrrc8a 674 0.879 - 0.879 - - - - - - -
7. hoxd4a ENSDARG00000059276 1516 0.841 - 0.841 - - - - - - - homeobox D4a [Source:ZFIN;Acc:ZDB-GENE-980526-214]
8. msh6 ENSDARG00000104541 197 0.84 - 0.840 - - - - - - - mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
9. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.838 - 0.838 - - - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
10. atp1a1a.4 ENSDARG00000001870 1864 0.836 - - - - - 0.836 - - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
11. tfeb ENSDARG00000010794 473 0.833 - 0.833 - - - - - - - transcription factor EB [Source:ZFIN;Acc:ZDB-GENE-090807-3]
12. mycn ENSDARG00000006837 1616 0.832 - - - - - 0.832 - - - MYCN proto-oncogene, bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-020711-1]
13. si:dkey-188i13.11 ENSDARG00000092895 548 0.831 - - - - - 0.831 - - - si:dkey-188i13.11 [Source:ZFIN;Acc:ZDB-GENE-090313-209]
14. sptlc2a ENSDARG00000018976 937 0.828 - - - - - 0.828 - - - serine palmitoyltransferase, long chain base subunit 2a [Source:ZFIN;Acc:ZDB-GENE-050522-23]
15. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 0.827 - - - - - 0.827 - - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
16. gucy2c ENSDARG00000014320, ENSDARG00000116238 322 0.823 - - - - - 0.823 - - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
17. zgc:175107 ENSDARG00000075417 39 0.822 - 0.822 - - - - - - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
18. socs2 ENSDARG00000045557 340 0.821 - 0.821 - - - - - - - suppressor of cytokine signaling 2 [Source:ZFIN;Acc:ZDB-GENE-041210-171]
19. cog5 ENSDARG00000008235 222 0.821 - 0.821 - - - - - - - component of oligomeric golgi complex 5 [Source:ZFIN;Acc:ZDB-GENE-041210-47]
20. acads ENSDARG00000030781 1669 0.82 - 0.820 - - - - - - - acyl-CoA dehydrogenase short chain [Source:ZFIN;Acc:ZDB-GENE-040808-64]
21. si:ch73-334d15.2 ENSDARG00000087020 441 0.819 - 0.819 - - - - - - - si:ch73-334d15.2 [Source:ZFIN;Acc:ZDB-GENE-091204-158]
22. cnep1r1 ENSDARG00000036064 1440 0.818 - 0.818 - - - - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
23. fam219aa ENSDARG00000016396 1788 0.813 0.813 - - - - - - - - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
24. ccdc174 ENSDARG00000023858 432 0.813 - 0.813 - - - - - - - coiled-coil domain containing 174 [Source:ZFIN;Acc:ZDB-GENE-050320-54]
25. prlrb ENSDARG00000045955 12 0.813 - 0.813 - - - - - - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
26. TOM1L2 ENSDARG00000056394 793 0.812 - 0.812 - - - - - - - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
27. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 0.812 0.812 - - - - - - - - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
28. micall1 micall1 720 0.811 - 0.811 - - - - - - -
29. acp6 ENSDARG00000040064 197 0.81 - 0.810 - - - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
30. GPA33 2465 0.81 0.810 - - - - - - - - glycoprotein A33 (transmembrane)
31. vps8 ENSDARG00000060477, ENSDARG00000113757 271 0.81 - 0.810 - - - - - - - vacuolar protein sorting 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-348]
32. cdh17 ENSDARG00000005112 3816 0.806 - - - - - 0.806 - - - cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]
33. dimt1l ENSDARG00000005057 230 0.806 - 0.806 - - - - - - - DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-75]
34. znf750 ENSDARG00000102267 327 0.806 - 0.806 - - - - - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
35. si:ch211-51a6.2 ENSDARG00000030967 593 0.805 - 0.805 - - - - - - - si:ch211-51a6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-118]
36. itpkca ENSDARG00000002994 710 0.805 - - - - - - 0.805 - - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
37. hspbp1 ENSDARG00000102937 260 0.801 - 0.801 - - - - - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
38. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 0.8 - - - - - - 0.800 - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
39. sidt2 ENSDARG00000045976 1997 0.799 0.799 - - - - - - - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
40. dhrs11a ENSDARG00000046090, ENSDARG00000112531 411 0.799 - 0.799 - - - - - - - dehydrogenase/reductase (SDR family) member 11a [Source:ZFIN;Acc:ZDB-GENE-060929-324]
41. FDXR ENSDARG00000089369 481 0.798 - - - - - 0.798 - - - ferredoxin reductase [Source:ZFIN;Acc:ZDB-GENE-130613-2]
42. C20H6orf58_1 C20H6orf58_1 216 0.796 - - 0.796 - - - - - -
43. TCERG1 TCERG1 324 0.796 - 0.796 - - - - - - -
44. paip1 ENSDARG00000042892 902 0.795 - - - - - 0.795 - - - poly(A) binding protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-247]
45. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 0.794 0.794 - - - - - - - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
46. si:ch211-42i9.4 si:ch211-42i9.4 1448 0.794 - 0.794 - - - - - - -
47. igf2bp2b ENSDARG00000099758, ENSDARG00000111268, ENSDARG00000116761 588 0.793 - 0.793 - - - - - - - insulin-like growth factor 2 mRNA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060503-536]
48. cramp1l cramp1l 700 0.793 - 0.793 - - - - - - -
49. si:ch211-270n8.4 87 0.791 - - - - - 0.791 - - - si:ch211-270n8.4
50. ERICH2 ENSDARG00000107534 160 0.791 - - - - - 0.791 - - - glutamate-rich 2 [Source:ZFIN;Acc:ZDB-GENE-131231-2]
51. C10H12orf44 C10H12orf44 787 0.791 - 0.791 - - - - - - -
52. esrrb ENSDARG00000100847 636 0.789 - - - - - 0.789 - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
53. HSCB HSCB 395 0.789 - 0.789 - - - - - - -
54. meig1 ENSDARG00000045705, ENSDARG00000114008, ENSDARG00000115242 570 0.789 - - - - - 0.789 - - - meiosis/spermiogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-050320-33]
55. CCDC108 CCDC108 74 0.788 - 0.788 - - - - - - -
56. capsla ENSDARG00000103521 277 0.788 - - - - - 0.788 - - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
57. sos2 ENSDARG00000060506 769 0.788 - 0.788 - - - - - - - son of sevenless homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090319-5]
58. SHISA9 SHISA9 154 0.788 - 0.788 - - - - - - -
59. tspo ENSDARG00000026655 12517 0.787 0.787 - - - - - - - - translocator protein [Source:ZFIN;Acc:ZDB-GENE-041010-125]
60. thap3 ENSDARG00000041080, ENSDARG00000114392 220 0.787 - 0.787 - - - - - - - THAP domain containing, apoptosis associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-050327-4]
61. kiaa0907 1674 0.787 - 0.787 - - - - - - - KIAA0907 protein, transcript variant X7
62. ankmy1 ENSDARG00000062702 52 0.786 - - - - - 0.786 - - - ankyrin repeat and MYND domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-740]
63. RSPH1 289 0.786 - 0.786 - - - - - - - radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
64. AEBP1 ENSDARG00000091726 1431 0.786 - 0.786 - - - - - - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
65. nedd4l ENSDARG00000060006 1669 0.786 - - - - - - 0.786 - - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
66. POLE4 ENSDARG00000013016 848 0.785 - 0.785 - - - - - - - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
67. degs2 ENSDARG00000042544 1912 0.785 0.785 - - - - - - - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
68. thap11 ENSDARG00000036055 238 0.785 - 0.785 - - - - - - - THAP domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2121]
69. aspdh ENSDARG00000038297 39 0.785 - - - - - 0.785 - - - aspartate dehydrogenase domain containing [Source:ZFIN;Acc:ZDB-GENE-040912-102]
70. echdc2 ENSDARG00000016607 719 0.784 - - - - - 0.784 - - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
71. tmem59l ENSDARG00000003655 1536 0.784 - 0.784 - - - - - - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
72. nras ENSDARG00000038225 450 0.784 - 0.784 - - - - - - - NRAS proto-oncogene, GTPase [Source:ZFIN;Acc:ZDB-GENE-990415-166]
73. btaf1 ENSDARG00000060089 822 0.783 - 0.783 - - - - - - - BTAF1 RNA polymerase II, B-TFIID transcription factor-associated [Source:ZFIN;Acc:ZDB-GENE-021025-1]
74. igf2b ENSDARG00000033307, ENSDARG00000116125 1537 0.782 - - - - - 0.782 - - - insulin-like growth factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2935]
75. smg6 ENSDARG00000100481 493 0.782 - 0.782 - - - - - - - SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
76. hvcn1 ENSDARG00000040338 571 0.782 - - - - - 0.782 - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
77. pxk ENSDARG00000063195 851 0.782 - 0.782 - - - - - - - PX domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050208-393]
78. CR384059.2 CR384059.2 139 0.782 - - - - - 0.782 - - -
79. CABZ01064972.1 ENSDARG00000098966 199 0.781 - - - - - 0.781 - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
80. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 0.781 - 0.781 - - - - - - - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
81. cish ENSDARG00000060316 329 0.78 - 0.780 - - - - - - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
82. scp2a ENSDARG00000012194 614 0.78 - - - - - - 0.780 - - sterol carrier protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1846]
83. pdcd6ip ENSDARG00000025269 2522 0.779 - - - - - - 0.779 - - programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
84. sae1 ENSDARG00000010487 2028 0.779 - 0.779 - - - - - - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
85. CABZ01078889.1 CABZ01078889.1 911 0.779 - 0.779 - - - - - - -
86. tex2 ENSDARG00000078186 2467 0.779 0.779 - - - - - - - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
87. hcfc2 ENSDARG00000058127 490 0.778 - 0.778 - - - - - - - host cell factor C2 [Source:ZFIN;Acc:ZDB-GENE-050417-203]
88. atpaf1 ENSDARG00000042799 1309 0.778 - - - - - 0.778 - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
89. ATOX1 ENSDARG00000087693 4016 0.778 - - - - - - 0.778 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
90. impad1 ENSDARG00000058114 667 0.776 0.776 - - - - - - - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
91. klf3 ENSDARG00000015495, ENSDARG00000114143 1640 0.776 0.776 - - - - - - - - Kruppel-like factor 3 (basic) [Source:ZFIN;Acc:ZDB-GENE-011116-1]
92. mb ENSDARG00000031952 351 0.776 - - - - - 0.776 - - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
93. trip11 ENSDARG00000078381 1763 0.776 - - - - - - 0.776 - - thyroid hormone receptor interactor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-9833]
94. si:ch211-195h23.3 ENSDARG00000068431 322 0.776 - - - - - 0.776 - - - si:ch211-195h23.3 [Source:ZFIN;Acc:ZDB-GENE-070912-174]
95. E2F1 ENSDARG00000103868 638 0.776 - 0.776 - - - - - - - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
96. FAM53C FAM53C 769 0.775 - 0.775 - - - - - - -
97. ube2h ENSDARG00000000019 9900 0.775 - - - - - - 0.775 - - ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
98. mrpl28 ENSDARG00000057805, ENSDARG00000109307, ENSDARG00000115867 1325 0.775 - 0.775 - - - - - - - mitochondrial ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-050522-113]
99. si:ch211-69i14.10 si:ch211-69i14.10 1939 0.775 - - - - - 0.775 - - -
100. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 0.774 - - - - - 0.774 - - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]

There are 257 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA