Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for crb1

Gene Name Gene ID Reads Annotation
crb1 ENSDARG00000100506, ENSDARG00000110621 373 crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]










Genes with expression patterns similar to crb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. crb1 ENSDARG00000100506, ENSDARG00000110621 373 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
2. ntn1b ENSDARG00000022531 248 3.417 0.789 0.917 - - - 0.772 0.939 - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
3. pkd2l1 ENSDARG00000022503 372 3.365 0.981 0.749 - - - 0.737 0.898 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
4. CU658147.1 CU658147.1 69 3.288 0.807 0.869 - - - 0.706 0.906 - -
5. pkd1b ENSDARG00000033029 461 3.136 0.808 0.707 - - - 0.738 0.883 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
6. sst1.1 ENSDARG00000040799 677 2.78 0.848 0.941 - - - - 0.991 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
7. nkx6.1 ENSDARG00000022569 3779 2.595 0.947 0.749 - - - - 0.899 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
8. prdm8 ENSDARG00000025017 370 2.509 0.747 0.816 - - - - 0.946 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
9. UNC13A UNC13A 36 2.49 - 0.736 - - - 0.883 0.871 - -
10. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 2.488 0.875 0.797 - - - - 0.816 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
11. scg2a 800 2.474 0.783 - - - - 0.766 0.925 - - secretogranin II (chromogranin C) a
12. ek1 ENSDARG00000020080 742 2.467 0.896 0.853 - - - - 0.718 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
13. nkx2.2a ENSDARG00000053298 747 2.37 0.830 0.770 - - - - 0.770 - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
14. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 2.369 0.716 - - - - 0.795 0.858 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
15. urp2 ENSDARG00000067781 85 2.356 0.840 0.707 - - - - 0.809 - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
16. shhb ENSDARG00000038867 338 2.317 - 0.709 - - - 0.832 0.776 - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
17. MSMP ENSDARG00000105581 254 2.29 0.737 - - - - 0.705 0.848 - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
18. epha3l epha3l 1441 2.286 0.850 0.729 - - - - 0.707 - -
19. slc18a3a ENSDARG00000006356 1285 2.284 0.753 0.722 - - - - 0.809 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
20. clu ENSDARG00000010434 498 2.278 - 0.706 - - - 0.709 0.863 - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
21. dla ENSDARG00000010791 9281 2.227 0.708 - - - - - 0.794 - 0.725 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
22. cyr61l2 ENSDARG00000099985 725 2.227 - 0.723 - - - 0.803 0.701 - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
23. olig2 ENSDARG00000040946 1405 1.903 0.936 - - - - - 0.967 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
24. ADAMTS3 ENSDARG00000060127 2839 1.875 0.929 - - - - - 0.946 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
25. mnx2a ENSDARG00000042106 939 1.858 0.937 - - - - - 0.921 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
26. zgc:113531 ENSDARG00000038794 2063 1.831 0.937 - - - - - 0.894 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
27. CCDC181 ENSDARG00000062021 77 1.818 0.912 0.906 - - - - - - - coiled-coil domain containing 181 [Source:ZFIN;Acc:ZDB-GENE-060503-312]
28. mnx2b ENSDARG00000030350 484 1.812 0.896 - - - - - 0.916 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
29. nkx2.9 ENSDARG00000020332 357 1.797 0.907 - - - - - 0.890 - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
30. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.791 0.876 - - - - - 0.915 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
31. gad1b ENSDARG00000027419 440 1.791 0.803 - - - - - 0.988 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
32. BX511121.1 ENSDARG00000029997 1774 1.79 0.901 - - - - - 0.889 - -
33. isl1 ENSDARG00000004023 981 1.778 - 0.847 - - - - 0.931 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
34. si:ch73-265d7.2 ENSDARG00000116713 2142 1.773 0.907 - - - - - 0.866 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
35. INSM2 ENSDARG00000020655 122 1.764 0.771 - - - - - 0.993 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
36. insm1a ENSDARG00000091756 1838 1.759 0.896 - - - - - 0.863 - - insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
37. TMEM100_1 TMEM100_1 44 1.758 - - - - - 0.765 0.993 - -
38. espn ENSDARG00000076414 343 1.75 0.919 - - - - - 0.831 - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
39. dync1i1 ENSDARG00000060948 554 1.748 0.802 - - - - - 0.946 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
40. kif5c ENSDARG00000076027 424 1.745 0.839 - - - - - 0.906 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
41. gad2 ENSDARG00000015537 724 1.738 0.938 - - - - - 0.800 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
42. CCSAP CCSAP 147 1.734 - 0.771 - - - - 0.963 - -
43. gpr19 ENSDARG00000102226 17 1.727 - 0.797 - - - - 0.930 - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
44. SGSM1_1 SGSM1_1 40 1.726 - - - - - 0.942 0.784 - -
45. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.717 0.960 - - - - - 0.757 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
46. hectd2 ENSDARG00000061194 559 1.709 0.847 - - - - - 0.862 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
47. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.701 - 0.835 - - - - 0.866 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
48. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 1.696 - 0.912 - - - - 0.784 - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
49. nrxn3b ENSDARG00000062693 192 1.694 - 0.736 - - - - 0.958 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
50. kif20a ENSDARG00000044491 12 1.693 - - - 0.763 - - 0.930 - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
51. SLC5A7 SLC5A7 453 1.693 0.916 - - - - - 0.777 - -
52. cers6 ENSDARG00000053583 247 1.69 - 0.835 - - - - 0.855 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
53. gpr144 gpr144 479 1.689 0.744 - - - - - 0.945 - -
54. her13 ENSDARG00000007097 2000 1.689 0.729 - - - - - 0.960 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
55. si:dkey-167k11.1 si:dkey-167k11.1 14 1.684 - - - 0.754 - - 0.930 - -
56. SHC3 ENSDARG00000098909 332 1.681 0.737 - - - - - 0.944 - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
57. im:7162084 im:7162084 665 1.677 0.945 - - - - - 0.732 - -
58. foxn4 ENSDARG00000010591 2332 1.676 - - - 0.758 - - 0.918 - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
59. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.668 - 0.946 - - - - 0.722 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
60. cdkl1 ENSDARG00000017329 3345 1.667 0.840 - - - - - 0.827 - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
61. bcl3 ENSDARG00000087832 69 1.663 - - - - - 0.942 - 0.721 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
62. tnika ENSDARG00000056218 728 1.65 - 0.769 - - - - 0.881 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
63. st18 663 1.65 0.757 - - - - - 0.893 - - suppression of tumorigenicity 18, zinc finger
64. ksr2 ENSDARG00000094526 134 1.648 - 0.769 - - - - 0.879 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
65. pcsk1nl ENSDARG00000076170 1232 1.647 - 0.804 - - - - 0.843 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
66. BX005421.3 ENSDARG00000114309 7 1.643 - - - - - 0.713 0.930 - -
67. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1.643 - - - - - 0.713 0.930 - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
68. zgc:195633_1 142 1.643 - - - - - 0.713 0.930 - - zgc:195633
69. zeb1a ENSDARG00000016788 48 1.643 - - - - - 0.713 0.930 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
70. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1.643 - - - - - 0.713 0.930 - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
71. celf4 ENSDARG00000070045 1537 1.641 - 0.805 - - - - 0.836 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
72. nadl1.1 1200 1.638 - 0.778 - - - - 0.860 - - neural adhesion molecule L1.1, transcript variant X1
73. PPP1R9B PPP1R9B 855 1.637 0.771 - - - - - 0.866 - -
74. THEM6 ENSDARG00000103914 49 1.636 - - - - - 0.716 0.920 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
75. sprn ENSDARG00000056004 128 1.636 0.753 - - - - - 0.883 - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
76. stx12l ENSDARG00000044605 99 1.634 0.715 - - - - - 0.919 - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
77. rcv1 rcv1 77 1.633 - - - - - 0.703 0.930 - -
78. hnrnpa3 ENSDARG00000059351 453 1.63 0.866 - - - - 0.764 - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
79. syt11a ENSDARG00000057913 1145 1.627 - 0.745 - - - - 0.882 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
80. SLC2A13 SLC2A13 74 1.627 - - - - - 0.771 0.856 - -
81. unc119b ENSDARG00000044362 1528 1.626 0.749 - - - - - 0.877 - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
82. csf1b ENSDARG00000068263 248 1.622 - - - - - 0.803 0.819 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
83. nkx6.2 ENSDARG00000104735 5081 1.622 0.869 - - - - - 0.753 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
84. ctnnd2b ENSDARG00000003779 964 1.622 - 0.789 - - - - 0.833 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
85. cnrip1a ENSDARG00000091683 1491 1.62 - 0.849 - - - - 0.771 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
86. C2CD4A ENSDARG00000061416 61 1.618 0.806 - - - - - 0.812 - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
87. wnt4a ENSDARG00000071208 1157 1.613 - - - - - 0.809 0.804 - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
88. chat chat 463 1.608 0.827 - - - - - 0.781 - -
89. dld ENSDARG00000020219 4928 1.603 - 0.720 - - - - 0.883 - - deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
90. SPOCK1 ENSDARG00000074644 794 1.602 - 0.789 - - - - 0.813 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
91. GADD45G GADD45G 382 1.597 - - - - - - 0.882 - 0.715
92. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.593 - 0.746 - - - - 0.847 - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
93. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.587 - 0.709 - - - - 0.878 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
94. nkx2.2b ENSDARG00000101549 266 1.586 0.847 - - - - 0.739 - - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
95. SYT2 ENSDARG00000014169 265 1.585 - 0.736 - - - - 0.849 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
96. dlg4 88 1.584 0.700 - - - - - 0.884 - - discs large MAGUK scaffold protein 4, transcript variant X5
97. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1.584 - - - - - 0.713 0.871 - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
98. calca ENSDARG00000056590 150 1.584 0.753 - - - - - 0.831 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
99. dlb ENSDARG00000004232 5120 1.582 0.832 - - - - - - - 0.750 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
100. atp1b4 ENSDARG00000053262 1337 1.575 0.721 - - - - - 0.854 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]

There are 1460 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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