Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cratb

Gene Name Gene ID Reads Annotation
cratb ENSDARG00000098782 705 carnitine O-acetyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040912-162]










Genes with expression patterns similar to cratb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cratb ENSDARG00000098782 705 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 carnitine O-acetyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040912-162]
2. si:ch211-245n8.4 ENSDARG00000096222 230 1.587 - 0.737 - - - - - 0.850 - si:ch211-245n8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-56]
3. CR382385.2 ENSDARG00000115992 353 1.516 - - - - - - 0.806 0.710 -
4. odf3l2 36 1.507 - - - - - - 0.713 0.794 - outer dense fiber of sperm tails 3-like 2
5. gnl2 ENSDARG00000098080 565 1.475 0.749 0.726 - - - - - - - guanine nucleotide binding protein-like 2 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-040426-2317]
6. anapc2 ENSDARG00000105035 239 1.461 - 0.705 - - - - - 0.756 - anaphase promoting complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-081104-256]
7. btr22 ENSDARG00000100539 137 1.429 - - - - - - 0.703 0.726 - bloodthirsty-related gene family, member 22 [Source:ZFIN;Acc:ZDB-GENE-080402-4]
8. gro1 gro1 81 1.429 - 0.714 - - - 0.715 - - -
9. CR788231.1 CR788231.1 61 1.427 - 0.724 - - - - 0.703 - -
10. rdh8a ENSDARG00000028048 334 0.889 - - - - - - 0.889 - - retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
11. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 0.88 - - - - - - 0.880 - - ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
12. fam8a1 fam8a1 561 0.877 - - - - - 0.877 - - -
13. TMEM184B TMEM184B 1280 0.877 - - - - - - - 0.877 -
14. tecpr2 ENSDARG00000060835 491 0.873 - - - - - 0.873 - - - tectonin beta-propeller repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060503-358]
15. slc16a5 slc16a5 173 0.872 - - - - - - - 0.872 -
16. trpv4 ENSDARG00000061941 297 0.869 - 0.869 - - - - - - - transient receptor potential cation channel, subfamily V, member 4 [Source:ZFIN;Acc:ZDB-GENE-030912-7]
17. setd6 ENSDARG00000043986, ENSDARG00000113991 194 0.863 - - - - - - - 0.863 - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
18. fbxo3 ENSDARG00000029242 529 0.86 - - - - - - - 0.860 - F-box protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-269]
19. LRRC45 ENSDARG00000014005 140 0.86 - - - - - - - 0.860 - leucine rich repeat containing 45 [Source:ZFIN;Acc:ZDB-GENE-121214-317]
20. pik3c2b ENSDARG00000086927 864 0.858 - - - - - 0.858 - - - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta [Source:ZFIN;Acc:ZDB-GENE-050309-145]
21. ITPA ENSDARG00000057529 493 0.856 - 0.856 - - - - - - - inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
22. si:dkey-178e17.3 ENSDARG00000058658 271 0.854 - - - - - - - 0.854 - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
23. ctdp1 ENSDARG00000017522 731 0.854 - - - - - - 0.854 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040720-1]
24. RNF214 RNF214 816 0.852 - - - - - - 0.852 - -
25. efcab7 ENSDARG00000020279 1030 0.848 - - - - - - - 0.848 - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
26. cep104 ENSDARG00000060361 303 0.847 - - - - - - - 0.847 - centrosomal protein 104 [Source:ZFIN;Acc:ZDB-GENE-060503-195]
27. ddx42 ENSDARG00000037928 1659 0.846 - - - - - - 0.846 - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
28. OAF OAF 459 0.845 - - - - - - - 0.845 -
29. hrasb ENSDARG00000005651 662 0.843 - - - - - - - 0.843 - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
30. scp2b ENSDARG00000102356 951 0.842 - - - - - - 0.842 - - sterol carrier protein 2b [Source:ZFIN;Acc:ZDB-GENE-041010-196]
31. CDCA7L CDCA7L 1365 0.841 - - - - - - 0.841 - -
32. glod4 ENSDARG00000042509, ENSDARG00000113811 297 0.84 - 0.840 - - - - - - - glyoxalase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040912-38]
33. wdr48 wdr48 383 0.84 - - - - - - - 0.840 -
34. wdr37 ENSDARG00000074611 468 0.84 - - - - - - 0.840 - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
35. efhc1 ENSDARG00000009743 113 0.839 - - - - - - - 0.839 - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
36. ctsc ENSDARG00000101334 3691 0.839 - - - - - - 0.839 - - cathepsin C [Source:ZFIN;Acc:ZDB-GENE-030619-9]
37. pms2 ENSDARG00000075672, ENSDARG00000115929 248 0.837 - - - - - - - 0.837 - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
38. zgc:173443 ENSDARG00000034403 26 0.837 - - - - - - - 0.837 - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
39. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 0.836 - - - - - - - 0.836 - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
40. mid2 ENSDARG00000034871 1001 0.836 - 0.836 - - - - - - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
41. cox5b2 ENSDARG00000068738 182 0.835 - 0.835 - - - - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
42. stk36 ENSDARG00000061095 113 0.835 - - - - - - - 0.835 - serine/threonine kinase 36 (fused homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030912-6]
43. syf2 ENSDARG00000004706 2463 0.834 - - - - - 0.834 - - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
44. ppp6r2b ENSDARG00000069654 323 0.831 - - - - - - - 0.831 - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
45. pvrl4 155 0.83 - - - - - - - 0.830 - poliovirus receptor-related 4
46. wnt10a ENSDARG00000017155 491 0.829 - - - 0.829 - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
47. si:ch211-125e6.8 ENSDARG00000094518 538 0.827 - - - - - - 0.827 - - si:ch211-125e6.8 [Source:ZFIN;Acc:ZDB-GENE-070912-42]
48. tfr1b_1 ENSDARG00000077372, ENSDARG00000112880 343 0.827 - - - - - - - 0.827 - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
49. mtmr2 ENSDARG00000004616 1052 0.826 - - - - - - - 0.826 - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
50. FP236168.1 FP236168.1 150 0.826 - - - - - - - 0.826 -
51. C18H15orf38 C18H15orf38 370 0.826 - - - - - - - 0.826 -
52. RNASEH2C ENSDARG00000089637 1673 0.822 - - - - - - 0.822 - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
53. ATP5SL ATP5SL 130 0.822 - - - - - - - 0.822 -
54. fibpa ENSDARG00000016058 2148 0.82 - - - - - - 0.820 - - fibroblast growth factor (acidic) intracellular binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1363]
55. angptl4 ENSDARG00000035859 2701 0.82 - - - - - - - 0.820 - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
56. fam129aa ENSDARG00000042055 222 0.82 - - - - - - - 0.820 - family with sequence similarity 129, member Aa [Source:ZFIN;Acc:ZDB-GENE-041014-181]
57. nipblb ENSDARG00000061052 6109 0.82 - - - - - 0.820 - - - nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
58. gch1 ENSDARG00000070453 898 0.819 - - - - - 0.819 - - - GTP cyclohydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-5]
59. swt1 ENSDARG00000094010 472 0.819 - - - - - - - 0.819 - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
60. tgfbr1a ENSDARG00000017494 1458 0.818 - - - - - - - 0.818 - transforming growth factor, beta receptor 1 a [Source:ZFIN;Acc:ZDB-GENE-051120-75]
61. wdr35 ENSDARG00000069269 492 0.818 - - - - - - - 0.818 - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
62. nhej1 ENSDARG00000058893 172 0.817 - - - - - - - 0.817 - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
63. SMAD4_3 SMAD4_3 131 0.814 - 0.814 - - - - - - -
64. GPR125 GPR125 837 0.813 - - - - - - 0.813 - -
65. fam173a ENSDARG00000041223, ENSDARG00000113102 639 0.813 - - - - - - 0.813 - - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
66. si:dkey-229b18.3 ENSDARG00000095912 568 0.812 - - - - - - - 0.812 - si:dkey-229b18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6870]
67. pigs ENSDARG00000017813 718 0.812 - - - - - - - 0.812 - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
68. pycr1 pycr1 1258 0.811 - - - - - - 0.811 - -
69. itga6a ENSDARG00000042282 1061 0.809 - 0.809 - - - - - - - integrin, alpha 6a [Source:ZFIN;Acc:ZDB-GENE-050309-23]
70. ptprk ENSDARG00000063416 742 0.809 - - - - - - - 0.809 - protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
71. tdp1 ENSDARG00000073866 214 0.809 - - - - - 0.809 - - - tyrosyl-DNA phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-090909-1]
72. rbm17 ENSDARG00000031346 2079 0.808 - - - - - - 0.808 - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
73. chst3a ENSDARG00000061070 127 0.808 - - - - - - - 0.808 - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
74. gria1b ENSDARG00000032714, ENSDARG00000111658 12 0.808 - - - - - - - 0.808 - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
75. CR385054.1_1 ENSDARG00000100106 43 0.806 - - - - - - - 0.806 -
76. ZXDC ZXDC 93 0.806 - 0.806 - - - - - - -
77. CU633477.1 CU633477.1 19 0.804 - - - - - - - 0.804 -
78. cpsf3l 870 0.804 - - - - - - 0.804 - - cleavage and polyadenylation specific factor 3-like, transcript variant X1
79. fbln5 ENSDARG00000039273 105 0.804 - - - - - - - 0.804 - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
80. susd5 ENSDARG00000088277 439 0.804 - 0.804 - - - - - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
81. MYH9 MYH9 158 0.802 - - - - - - - 0.802 -
82. si:dkey-4j21.1 17 0.802 - - - - - - - 0.802 - si:dkey-4j21.1, transcript variant X2
83. ccdc151 ENSDARG00000062978, ENSDARG00000113033 316 0.801 - - - - - - - 0.801 - coiled-coil domain containing 151 [Source:ZFIN;Acc:ZDB-GENE-061013-787]
84. zgc:113162 ENSDARG00000052923 62 0.801 - - - - - - - 0.801 - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
85. cbln4 ENSDARG00000061240 67 0.799 - - - - - - - 0.799 - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
86. bik ENSDARG00000045549 18 0.799 - - - - - - - 0.799 - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
87. bon bon 20 0.799 - - - - - - - 0.799 -
88. CABZ01078944.1 CABZ01078944.1 9 0.799 - - - - - - - 0.799 -
89. si:dkey-152b24.7 ENSDARG00000099715 26 0.799 - - - - - - - 0.799 - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
90. SLC35A3_1 SLC35A3_1 35 0.799 - - - - - - - 0.799 -
91. si:dkey-148f24.5 si:dkey-148f24.5 7 0.799 - - - - - - - 0.799 -
92. CU855931.2 CU855931.2 13 0.799 - - - - - - - 0.799 -
93. FAM124B ENSDARG00000087489 16 0.799 - - - - - - - 0.799 - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
94. si:dkey-167k11.1 si:dkey-167k11.1 14 0.799 - - - - - - - 0.799 -
95. RDM1 RDM1 28 0.799 - - - - - - - 0.799 -
96. chmp6b ENSDARG00000102024 37 0.798 - - - - - - - 0.798 - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
97. CABZ01003826.1 CABZ01003826.1 486 0.798 0.798 - - - - - - - -
98. rtcb ENSDARG00000101047 496 0.798 - - - - - - - 0.798 - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2096]
99. apnl ENSDARG00000090900 21 0.798 - - - - - - - 0.798 - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
100. si:ch73-222h13.1 ENSDARG00000087107 16 0.797 - - - - - - - 0.797 - si:ch73-222h13.1 [Source:ZFIN;Acc:ZDB-GENE-090313-144]

There are 528 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA