Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for crabp1b

Gene Name Gene ID Reads Annotation
crabp1b ENSDARG00000035904 2753 cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]










Genes with expression patterns similar to crabp1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. crabp1b ENSDARG00000035904 2753 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
2. hoxc13a ENSDARG00000070353 4815 3.275 - - - 0.886 0.887 - - 0.777 0.725 homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
3. phldb1a ENSDARG00000061093 1637 2.631 - 0.993 0.866 - - 0.772 - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
4. BX511121.1 ENSDARG00000029997 1774 2.609 - - - 0.909 0.865 - - 0.835 -
5. frem2a ENSDARG00000076856 11022 2.522 - - 0.885 0.770 0.867 - - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
6. antxr1c ENSDARG00000063612 3203 2.413 - - 0.963 - 0.723 - - 0.727 - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
7. sall4 ENSDARG00000044485 1694 2.392 - - - 0.789 - 0.774 0.829 - - spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
8. ncana 1537 2.267 - - - - 0.788 0.710 - 0.769 - neurocan a
9. suv39h1b ENSDARG00000055753 1540 1.911 - 0.993 0.918 - - - - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
10. sema3ab ENSDARG00000042210, ENSDARG00000110306 2178 1.819 - 0.995 0.824 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab [Source:ZFIN;Acc:ZDB-GENE-991209-6]
11. ahsa1l ahsa1l 2366 1.816 - 0.994 0.822 - - - - - -
12. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.779 - 0.991 - - - 0.788 - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
13. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 1.775 - 0.995 - - - 0.780 - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
14. ddx42 ENSDARG00000037928 1659 1.774 - 0.994 - - - 0.780 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
15. dyrk1ab ENSDARG00000023814 1769 1.772 - 0.994 - - - 0.778 - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
16. psmd11a ENSDARG00000060150 4529 1.762 - 0.990 - - - - 0.772 - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
17. BX649554.3_1 BX649554.3_1 1071 1.761 - - 0.942 0.819 - - - - -
18. tes ENSDARG00000051857 2020 1.756 - 0.996 - - - 0.760 - - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
19. thbs4a ENSDARG00000102777 625 1.753 - 0.994 - - - - - 0.759 - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
20. xylt1 ENSDARG00000061248 2357 1.75 - 0.993 - - - 0.757 - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
21. ntd5 ENSDARG00000040944 4988 1.748 - - - 0.946 0.802 - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
22. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.742 - 0.994 - - - 0.748 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
23. CABZ01074130.1 ENSDARG00000105274 26501 1.73 - - - 0.868 0.862 - - - -
24. esrrga ENSDARG00000004861 805 1.728 - 0.993 - - 0.735 - - - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
25. wnt5b ENSDARG00000102464 1662 1.722 - - 0.951 - 0.771 - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
26. asna1 ENSDARG00000018190 5253 1.721 - 0.972 - - - 0.749 - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
27. hoxa13a ENSDARG00000100312 543 1.717 - - - 0.912 0.805 - - - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
28. FBLN1 ENSDARG00000103311 877 1.714 - - 0.946 - 0.768 - - - - fibulin 1 [Source:NCBI gene;Acc:30240]
29. wu:fb54a03 wu:fb54a03 1722 1.701 - 0.993 - - - - 0.708 - -
30. gfap ENSDARG00000025301 5584 1.699 - 0.992 - - - 0.707 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
31. prune2 ENSDARG00000059423, ENSDARG00000116519 646 1.696 - 0.994 - - - 0.702 - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
32. tsc22d2 ENSDARG00000041839 1109 1.695 - 0.935 - - - - 0.760 - - TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
33. zgc:92061 zgc:92061 21304 1.695 - - - 0.914 0.781 - - - -
34. fgfr2 ENSDARG00000058115 6743 1.693 - 0.975 - - - 0.718 - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
35. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 1.693 - - 0.751 - 0.942 - - - - mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
36. atp2b4 5891 1.691 - 0.935 - - - - 0.756 - - ATPase, Ca++ transporting, plasma membrane 4
37. smarce1 ENSDARG00000016871 9628 1.691 - 0.979 - - - 0.712 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
38. KIF26A KIF26A 1077 1.688 - - 0.921 - - 0.767 - - -
39. CASK CASK 1750 1.686 - - 0.850 - - 0.836 - - -
40. cog2 ENSDARG00000004037 462 1.681 - - 0.959 0.722 - - - - - component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
41. col4a4 ENSDARG00000002831 803 1.667 - - - 0.837 0.830 - - - - collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
42. prickle1b ENSDARG00000045694 7536 1.666 - - 0.840 - 0.826 - - - - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
43. hoxd13a ENSDARG00000059256 1190 1.662 - - 0.835 - 0.827 - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
44. map3k10 ENSDARG00000055672 284 1.661 - - 0.941 - - 0.720 - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
45. rapgef1a ENSDARG00000043593 416 1.656 - - 0.939 - - 0.717 - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
46. tfdp2 ENSDARG00000042835 1985 1.653 - - 0.915 - - 0.738 - - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
47. TNRC6B ENSDARG00000074161 2464 1.652 - - 0.890 - - 0.762 - - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
48. dpp6b ENSDARG00000024744 234 1.649 - - - 0.861 - 0.788 - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
49. hoxa9a ENSDARG00000105013 1509 1.645 - - 0.914 - - 0.731 - - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
50. inhbb ENSDARG00000040777 2141 1.632 - - 0.878 - - - 0.754 - - inhibin subunit beta B [Source:ZFIN;Acc:ZDB-GENE-990415-2]
51. cercam ENSDARG00000079049, ENSDARG00000109573 2228 1.629 - - 0.872 0.757 - - - - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
52. trpm7 ENSDARG00000036232 925 1.623 0.701 - 0.922 - - - - - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
53. cdkl1 ENSDARG00000017329 3345 1.609 - - - 0.888 - - - - 0.721 cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
54. colgalt2 ENSDARG00000014670 1932 1.595 - - 0.876 - - - - 0.719 - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
55. zfpl1 ENSDARG00000103453 860 1.592 - - - 0.816 - 0.776 - - - zinc finger protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1255]
56. cers2a ENSDARG00000013704 4239 1.586 - - 0.849 0.737 - - - - - ceramide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020808-2]
57. psenen ENSDARG00000068698 2777 1.575 - - 0.796 - - 0.779 - - - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
58. im:7150988 ENSDARG00000109310 28520 1.574 - 0.791 - - 0.783 - - - - im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
59. CAMTA2 ENSDARG00000092799 1950 1.574 - - 0.846 - - 0.728 - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
60. LRRC8A LRRC8A 406 1.573 - - - 0.847 - 0.726 - - -
61. tbc1d5 ENSDARG00000036212 2580 1.572 - - 0.831 - - 0.741 - - - TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]
62. TTBK1_1 TTBK1_1 132 1.571 0.801 - - - - 0.770 - - -
63. PRKDC ENSDARG00000075083 693 1.569 - - - 0.768 - - 0.801 - - protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]
64. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.568 - - 0.837 - - - 0.731 - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
65. bmp4 ENSDARG00000019995 2038 1.568 - - 0.851 - 0.717 - - - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
66. enkur ENSDARG00000031248 427 1.557 - - 0.852 - - - - 0.705 - enkurin, TRPC channel interacting protein [Source:ZFIN;Acc:ZDB-GENE-070718-1]
67. MYOF ENSDARG00000006112 436 1.557 - - - - 0.781 - - 0.776 - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
68. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.556 - - 0.846 - - 0.710 - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
69. qsox1 ENSDARG00000039459 320 1.552 0.719 - - 0.833 - - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7019]
70. wu:fb17f05 wu:fb17f05 13622 1.551 - - - 0.835 0.716 - - - -
71. sar1b ENSDARG00000103403 1699 1.542 - - 0.824 - - - 0.718 - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
72. kazald2 ENSDARG00000078518 3062 1.536 - - - 0.751 0.785 - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
73. angptl7 ENSDARG00000027582, ENSDARG00000110344 1574 1.53 - - - 0.723 0.807 - - - - angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
74. GANAB_2 GANAB_2 3210 1.528 - - - - - 0.823 0.705 - -
75. bub1bb ENSDARG00000074927 1667 1.525 - - 0.814 - - 0.711 - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
76. gdf10b ENSDARG00000073891 116 1.516 - - - - 0.816 - - 0.700 - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
77. zgc:109744 ENSDARG00000070800 262 1.516 0.770 - - - - 0.746 - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
78. tmem127 ENSDARG00000030981 1389 1.496 - - - - - 0.784 0.712 - - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
79. and1 ENSDARG00000088514 37603 1.49 - - - 0.723 0.767 - - - - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
80. si:ch211-194k22.8 ENSDARG00000096711 1318 1.487 - - - - - 0.781 0.706 - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
81. prrx1a ENSDARG00000033971 1786 1.487 - - - 0.766 - - 0.721 - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
82. rerea ENSDARG00000077353 4162 1.486 - - 0.783 - - 0.703 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
83. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 1.485 - - 0.771 - - - 0.714 - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
84. derl2 ENSDARG00000042401 863 1.483 - - - - - - 0.779 0.704 - derlin 2 [Source:ZFIN;Acc:ZDB-GENE-050522-90]
85. spag1a ENSDARG00000004017 1140 1.48 - - - - - 0.758 - 0.722 - sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
86. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.48 - - - 0.708 - 0.772 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
87. tnks tnks 1695 1.478 - - 0.752 - - 0.726 - - -
88. snrpa1 ENSDARG00000024651 3306 1.475 - - - - - 0.728 0.747 - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
89. mllt3 ENSDARG00000006754 985 1.475 - - - 0.718 0.757 - - - - MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]
90. CR388231.3 ENSDARG00000105601 2404 1.467 - - 0.720 - - 0.747 - - -
91. arhgap5 ENSDARG00000061294 2228 1.465 - - - - - 0.731 0.734 - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
92. TMEM128 552 1.458 - - - 0.739 - 0.719 - - - transmembrane protein 128
93. nexmifb ENSDARG00000029296 416 1.457 - - - 0.702 - 0.755 - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
94. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.455 - - - 0.743 - 0.712 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
95. bcam ENSDARG00000090190 39912 1.45 - - - 0.705 0.745 - - - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
96. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.449 - - - 0.731 - 0.718 - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
97. dync1li2 ENSDARG00000035924, ENSDARG00000110202 1429 1.444 - - - 0.715 - 0.729 - - - dynein, cytoplasmic 1, light intermediate chain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-156]
98. fam60al_1 949 1.443 - - - 0.731 - 0.712 - - - family with sequence similarity 60, member A, like
99. ptgs2a ENSDARG00000004539 1207 1.437 - - - - 0.707 0.730 - - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
100. si:dkey-95p16.2 ENSDARG00000093484 3413 1.43 - - - 0.726 - - 0.704 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]

There are 1494 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA