Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cpsf4

Gene Name Gene ID Reads Annotation
cpsf4 ENSDARG00000020217 764 cleavage and polyadenylation specific factor 4 [Source:ZFIN;Acc:ZDB-GENE-990415-180]










Genes with expression patterns similar to cpsf4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cpsf4 ENSDARG00000020217 764 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cleavage and polyadenylation specific factor 4 [Source:ZFIN;Acc:ZDB-GENE-990415-180]
2. mrps23 ENSDARG00000033973 2265 1.737 - 0.757 - - - 0.980 - - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
3. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.724 - - - 0.736 - 0.988 - - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
4. iqsec2 iqsec2 304 1.697 - - - 0.708 - 0.989 - - -
5. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.695 - - - 0.723 - 0.972 - - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
6. NELL2A ENSDARG00000090690 840 1.682 - - - 0.703 - 0.979 - - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
7. n4bp2 ENSDARG00000061451, ENSDARG00000113406 238 1.53 - 0.830 - 0.700 - - - - - NEDD4 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-061103-451]
8. nsmce1 ENSDARG00000098780 289 1.517 - 0.709 - - - - 0.808 - - NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]
9. KBTBD2 ENSDARG00000087226 707 1.454 - 0.721 - 0.733 - - - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
10. cobl_1 ENSDARG00000091006 293 1.441 - 0.709 - - - - 0.732 - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
11. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.44 - 0.735 - 0.705 - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
12. TMEM45A ENSDARG00000070743 1669 1.43 - 0.725 - 0.705 - - - - - transmembrane protein 45a [Source:ZFIN;Acc:ZDB-GENE-050522-34]
13. sae1 ENSDARG00000010487 2028 1.404 - 0.703 - 0.701 - - - - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
14. psmg3 ENSDARG00000098391 920 0.998 - - - - - 0.998 - - - proteasome (prosome, macropain) assembly chaperone 3 [Source:ZFIN;Acc:ZDB-GENE-040718-262]
15. slc25a46 ENSDARG00000035181 668 0.998 - - - - - 0.998 - - - solute carrier family 25, member 46 [Source:ZFIN;Acc:ZDB-GENE-040718-296]
16. ppap2c ppap2c 1361 0.996 - - - - - 0.996 - - -
17. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 0.996 - - - - - 0.996 - - - plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
18. CABZ01039859.1 ENSDARG00000076361 540 0.996 - - - - - 0.996 - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
19. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 0.996 - - - - - 0.996 - - - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
20. ccnl1b ENSDARG00000012140 1639 0.995 - - - - - 0.995 - - - cyclin L1b [Source:ZFIN;Acc:ZDB-GENE-030131-4813]
21. bcl6ab ENSDARG00000069295 656 0.995 - - - - - 0.995 - - - B-cell CLL/lymphoma 6a, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-030131-7523]
22. brms1la ENSDARG00000006235 2011 0.995 - - - - - 0.995 - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
23. zgc:110333 ENSDARG00000040628 3250 0.994 - - - - - 0.994 - - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
24. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 0.994 - - - - - 0.994 - - - glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
25. mau2 ENSDARG00000042056 2378 0.993 - - - - - 0.993 - - - MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
26. PHYHIP ENSDARG00000116497 456 0.99 - - - - - 0.990 - - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
27. DUSP13_1 DUSP13_1 425 0.99 - - - - - 0.990 - - -
28. efcab7 ENSDARG00000020279 1030 0.99 - - - - - 0.990 - - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
29. cradd ENSDARG00000028192 153 0.99 - - - - - 0.990 - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
30. cdc42se1 ENSDARG00000023724 3901 0.99 - - - - - 0.990 - - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
31. CABZ01035189.1 CABZ01035189.1 1070 0.99 - - - - - 0.990 - - -
32. FAM117A_1 FAM117A_1 360 0.99 - - - - - 0.990 - - -
33. kcna1 kcna1 174 0.99 - - - - - 0.990 - - -
34. styk1 1199 0.99 - - - - - 0.990 - - - serine/threonine/tyrosine kinase 1
35. ins ENSDARG00000035350, ENSDARG00000116735 317 0.99 - - - - - 0.990 - - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
36. osgn1 ENSDARG00000052279 5607 0.989 - - - - - 0.989 - - - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
37. chid1 ENSDARG00000069673 675 0.989 - - - - - 0.989 - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
38. pigs ENSDARG00000017813 718 0.989 - - - - - 0.989 - - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
39. nom1 ENSDARG00000060027, ENSDARG00000112720 831 0.989 - - - - - 0.989 - - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
40. prc1a ENSDARG00000100918 1746 0.989 - - - - - 0.989 - - - protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
41. BX322787.1 ENSDARG00000105779 381 0.989 - - - - - 0.989 - - -
42. RAB11FIP5 RAB11FIP5 626 0.989 - - - - - 0.989 - - -
43. smim7 ENSDARG00000074848 1260 0.989 - - - - - 0.989 - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
44. zgc:153924 507 0.989 - - - - - 0.989 - - - zgc:153924
45. CU571255.1 CU571255.1 902 0.989 - - - - - 0.989 - - -
46. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 0.989 - - - - - 0.989 - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
47. CU929378.1 CU929378.1 514 0.989 - - - - - 0.989 - - -
48. si:dkey-221j11.3 ENSDARG00000093304 1001 0.989 - - - - - 0.989 - - - si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
49. MON1B_1 MON1B_1 697 0.989 - - - - - 0.989 - - -
50. irs2 irs2 392 0.989 - - - - - 0.989 - - -
51. CABZ01041962.1 ENSDARG00000076082 690 0.989 - - - - - 0.989 - - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
52. orc4 ENSDARG00000101161 1081 0.988 - - - - - 0.988 - - - origin recognition complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2224]
53. si:dkey-56e3.2 ENSDARG00000092551 835 0.988 - - - - - 0.988 - - - si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
54. epc1 epc1 1164 0.988 - - - - - 0.988 - - -
55. dot1l ENSDARG00000061992 602 0.988 - - - - - 0.988 - - - DOT1-like histone H3K79 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060503-341]
56. dnah9l ENSDARG00000062630 268 0.988 - - - - - 0.988 - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
57. eif2ak1 ENSDARG00000093182, ENSDARG00000112267 695 0.988 - - - - - 0.988 - - - eukaryotic translation initiation factor 2-alpha kinase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-268]
58. ing2 ENSDARG00000104907 1336 0.988 - - - - - 0.988 - - - inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
59. oacyl ENSDARG00000075191 351 0.988 - - - - - 0.988 - - - O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-090710-2]
60. chmp4c ENSDARG00000007418, ENSDARG00000110750 729 0.988 - - - - - 0.988 - - - charged multivesicular body protein 4C [Source:ZFIN;Acc:ZDB-GENE-050417-389]
61. eif4g3b ENSDARG00000074331, ENSDARG00000116386 1155 0.988 - - - - - 0.988 - - - eukaryotic translation initiation factor 4 gamma, 3b [Source:ZFIN;Acc:ZDB-GENE-090312-49]
62. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 0.988 - - - - - 0.988 - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
63. mtmr2 ENSDARG00000004616 1052 0.988 - - - - - 0.988 - - - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
64. dus3l ENSDARG00000099528 1192 0.988 - - - - - 0.988 - - - dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
65. crfb17 511 0.988 - - - - - 0.988 - - - cytokine receptor family member B17
66. RMDN2 ENSDARG00000078761 717 0.988 - - - - - 0.988 - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
67. sox7 ENSDARG00000030125 806 0.988 - - - - - 0.988 - - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
68. smox ENSDARG00000036967 3816 0.987 - - - - - 0.987 - - - spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
69. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.987 - - - - - 0.987 - - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
70. C13H9orf72 C13H9orf72 2310 0.987 - - - - - 0.987 - - -
71. SNORA21 SNORA21 547 0.987 - - - - - 0.987 - - -
72. MAP1S_1 MAP1S_1 1117 0.987 - - - - - 0.987 - - -
73. cwc22 ENSDARG00000014008 2385 0.987 - - - - - 0.987 - - - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
74. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 0.987 - - - - - 0.987 - - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
75. sec62 ENSDARG00000019951 3724 0.986 - - - - - 0.986 - - - SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
76. trim33 ENSDARG00000016181 1718 0.986 - - - - - 0.986 - - - tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
77. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 0.986 - - - - - 0.986 - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
78. zgc:77391 zgc:77391 1445 0.986 - - - - - 0.986 - - -
79. KRT78 KRT78 10751 0.986 - - - - - 0.986 - - -
80. suv420h1 1810 0.986 - - - - - 0.986 - - - suppressor of variegation 4-20 homolog 1 (Drosophila)
81. tmed7 ENSDARG00000046022 2435 0.986 - - - - - 0.986 - - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
82. rpa2 ENSDARG00000037188 4284 0.986 - - - - - 0.986 - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
83. mier1a ENSDARG00000041072 1690 0.986 - - - - - 0.986 - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
84. znf280d ENSDARG00000077013 1387 0.986 - - - - - 0.986 - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
85. rbm15 ENSDARG00000073847, ENSDARG00000110499 1307 0.986 - - - - - 0.986 - - - RNA binding motif protein 15 [Source:ZFIN;Acc:ZDB-GENE-041008-192]
86. fbxl22 ENSDARG00000096995 1290 0.986 - - - - - 0.986 - - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
87. elovl7b ENSDARG00000100185 2032 0.986 - - - - - 0.986 - - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
88. gk5 ENSDARG00000062864 738 0.986 - - - - - 0.986 - - - glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
89. dmrt2a ENSDARG00000015072, ENSDARG00000113160 895 0.985 - - - - - 0.985 - - - doublesex and mab-3 related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-990621-7]
90. fam21c 1768 0.985 - - - - - 0.985 - - - family with sequence similarity 21, member C, transcript variant X6
91. txnl4a ENSDARG00000036190 2048 0.985 - - - - - 0.985 - - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
92. ptplad1 ptplad1 1084 0.985 - - - - - 0.985 - - -
93. ssu72 ENSDARG00000031216 2350 0.985 - - - - - 0.985 - - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
94. ppp1r14aa ENSDARG00000011239 980 0.985 - - - - - 0.985 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Aa [Source:ZFIN;Acc:ZDB-GENE-050417-413]
95. disp1 ENSDARG00000044417 603 0.985 - - - - - 0.985 - - - dispatched homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030911-7]
96. ssh2a ENSDARG00000088440 1149 0.985 - - - - - 0.985 - - - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
97. si:dkey-9i23.16 ENSDARG00000093954 929 0.985 - - - - - 0.985 - - - si:dkey-9i23.16 [Source:ZFIN;Acc:ZDB-GENE-090313-362]
98. peli2 ENSDARG00000029045 844 0.985 - - - - - 0.985 - - - pellino E3 ubiquitin protein ligase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-360]
99. irf6 ENSDARG00000101986 1438 0.984 - - - - - 0.984 - - - interferon regulatory factor 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1137]
100. stmn1a ENSDARG00000004169 21169 0.984 - - - - - 0.984 - - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]

There are 516 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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