Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cpsf3l

Gene Name Gene ID Reads Annotation
cpsf3l 870 cleavage and polyadenylation specific factor 3-like, transcript variant X1










Genes with expression patterns similar to cpsf3l

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cpsf3l 870 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cleavage and polyadenylation specific factor 3-like, transcript variant X1
2. afap1l1b ENSDARG00000056453 583 1.496 - 0.739 - - - - 0.757 - - actin filament associated protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-061013-428]
3. arl6 ENSDARG00000032056, ENSDARG00000113281 238 1.48 0.733 - - - - - 0.747 - - ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
4. vps72 1164 0.899 - 0.899 - - - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
5. ddx42 ENSDARG00000037928 1659 0.895 - - - - - - 0.895 - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
6. rbpms2b ENSDARG00000079578 436 0.879 - 0.879 - - - - - - - RNA binding protein, mRNA processing factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-741]
7. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 0.876 - - - - - - 0.876 - - ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
8. ptprjb ptprjb 95 0.87 - 0.870 - - - - - - -
9. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 0.868 - - - - - - 0.868 - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
10. PHLDB2_1 PHLDB2_1 316 0.854 - - - - - - 0.854 - -
11. trim35-39 ENSDARG00000071241 464 0.848 - 0.848 - - - - - - - tripartite motif containing 35-39 [Source:ZFIN;Acc:ZDB-GENE-080219-13]
12. NTF4 NTF4 355 0.847 - 0.847 - - - - - - -
13. C25H12orf73 C25H12orf73 2031 0.844 - 0.844 - - - - - - -
14. RNF214 RNF214 816 0.842 - - - - - - 0.842 - -
15. fem1b ENSDARG00000062636 474 0.841 - - - - - - 0.841 - - fem-1 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-071009-3]
16. chtf18 ENSDARG00000058480, ENSDARG00000111334 506 0.84 - 0.840 - - - - - - - CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-508]
17. snrpb2 ENSDARG00000039424 1597 0.835 - 0.835 - - - - - - - small nuclear ribonucleoprotein polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-060616-2]
18. MIB1 ENSDARG00000102184 3285 0.834 - 0.834 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
19. mier1a ENSDARG00000041072 1690 0.833 - - - - - - 0.833 - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
20. si:ch211-255g12.9 si:ch211-255g12.9 78 0.83 - 0.830 - - - - - - -
21. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.828 - 0.828 - - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
22. par1 par1 564 0.825 - 0.825 - - - - - - -
23. si:ch211-163b2.4 ENSDARG00000094890 140 0.825 - - - - - - 0.825 - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
24. hbae1 14666 0.825 - 0.825 - - - - - - - hemoglobin, alpha embryonic 1
25. gpr63 ENSDARG00000074540 242 0.823 - - - - - - 0.823 - - G protein-coupled receptor 63 [Source:ZFIN;Acc:ZDB-GENE-110411-183]
26. cep55l ENSDARG00000102349 604 0.818 - 0.818 - - - - - - - centrosomal protein 55 like [Source:ZFIN;Acc:ZDB-GENE-050522-222]
27. ccdc174 ENSDARG00000023858 432 0.817 - 0.817 - - - - - - - coiled-coil domain containing 174 [Source:ZFIN;Acc:ZDB-GENE-050320-54]
28. mmp15a ENSDARG00000051962 932 0.815 - 0.815 - - - - - - - matrix metallopeptidase 15a [Source:ZFIN;Acc:ZDB-GENE-070817-4]
29. cyb5r1 ENSDARG00000018966, ENSDARG00000112062 1017 0.812 - 0.812 - - - - - - - cytochrome b5 reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8497]
30. galt ENSDARG00000069543 473 0.812 - 0.812 - - - - - - - galactose-1-phosphate uridylyltransferase [Source:ZFIN;Acc:ZDB-GENE-070112-172]
31. KBTBD2 ENSDARG00000087226 707 0.811 - 0.811 - - - - - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
32. fam173a ENSDARG00000041223, ENSDARG00000113102 639 0.809 - - - - - - 0.809 - - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
33. nap1l4b ENSDARG00000068868 3285 0.808 - 0.808 - - - - - - - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
34. dbpb ENSDARG00000057652, ENSDARG00000116703 71 0.808 - 0.808 - - - - - - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
35. BX465205.1 ENSDARG00000097139 64 0.808 - 0.808 - - - - - - -
36. cnep1r1 ENSDARG00000036064 1440 0.807 - 0.807 - - - - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
37. dcaf13 ENSDARG00000002267 2435 0.805 - - - - - - 0.805 - - ddb1 and cul4 associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-703]
38. ptcd1 ENSDARG00000076176 281 0.805 - 0.805 - - - - - - - pentatricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6146]
39. ENGASE ENSDARG00000010035 232 0.805 - 0.805 - - - - - - - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
40. DIDO1 ENSDARG00000057940 312 0.804 - 0.804 - - - - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
41. cratb ENSDARG00000098782 705 0.804 - - - - - - 0.804 - - carnitine O-acetyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040912-162]
42. CDCA7L CDCA7L 1365 0.8 - - - - - - 0.800 - -
43. C1H9orf156 C1H9orf156 122 0.8 - 0.800 - - - - - - -
44. polr1d ENSDARG00000037570 860 0.8 - 0.800 - - - - - - - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
45. si:ch1073-181h11.4 ENSDARG00000098347 86 0.8 - 0.800 - - - - - - - si:ch1073-181h11.4 [Source:ZFIN;Acc:ZDB-GENE-091204-426]
46. dynlt1 ENSDARG00000045909 2451 0.8 - - - - - - 0.800 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
47. lmbrd1 ENSDARG00000104223 924 0.798 0.798 - - - - - - - - LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
48. mapk7 ENSDARG00000023110 455 0.798 - - - 0.798 - - - - - mitogen-activated protein kinase 7 [Source:ZFIN;Acc:ZDB-GENE-050320-10]
49. grip2a ENSDARG00000087187 401 0.797 - 0.797 - - - - - - - glutamate receptor interacting protein 2a [Source:ZFIN;Acc:ZDB-GENE-081104-132]
50. CDH24 CDH24 325 0.796 - 0.796 - - - - - - -
51. erfl3 ENSDARG00000062801 149 0.796 - 0.796 - - - - - - - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
52. rab34a ENSDARG00000045628, ENSDARG00000113347 358 0.794 - - - - - - 0.794 - - RAB34, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041010-197]
53. senp3b ENSDARG00000056741 1296 0.793 - 0.793 - - - - - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
54. adoa ENSDARG00000042827 310 0.793 - 0.793 - - - - - - - 2-aminoethanethiol (cysteamine) dioxygenase a [Source:ZFIN;Acc:ZDB-GENE-041212-62]
55. SCAF8 1618 0.792 - - - - - 0.792 - - - SR-related CTD-associated factor 8, transcript variant X3
56. zdhhc16b ENSDARG00000015989 193 0.792 - - - - - - 0.792 - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
57. fam198b ENSDARG00000077054 98 0.79 - 0.790 - - - - - - - family with sequence similarity 198, member B [Source:ZFIN;Acc:ZDB-GENE-100105-1]
58. ctdp1 ENSDARG00000017522 731 0.79 - - - - - - 0.790 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040720-1]
59. GPR125 GPR125 837 0.789 - 0.789 - - - - - - -
60. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 0.789 - - - - - - 0.789 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
61. yeats4 ENSDARG00000045874 1168 0.789 0.789 - - - - - - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
62. micall1 micall1 720 0.787 - 0.787 - - - - - - -
63. phax ENSDARG00000044298 2302 0.786 - 0.786 - - - - - - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
64. b4galt7 ENSDARG00000021899 546 0.786 - 0.786 - - - - - - - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
65. she ENSDARG00000087956 941 0.786 - 0.786 - - - - - - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
66. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.785 - 0.785 - - - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
67. timeless ENSDARG00000078497 1114 0.784 - 0.784 - - - - - - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
68. btaf1 ENSDARG00000060089 822 0.783 - 0.783 - - - - - - - BTAF1 RNA polymerase II, B-TFIID transcription factor-associated [Source:ZFIN;Acc:ZDB-GENE-021025-1]
69. BAZ2B BAZ2B 3285 0.782 - - - - - - 0.782 - -
70. orc1 ENSDARG00000039217, ENSDARG00000115400 795 0.781 - - - - - - 0.781 - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
71. jdp2 jdp2 301 0.781 - 0.781 - - - - - - -
72. mcm10 ENSDARG00000045815 196 0.781 - 0.781 - - - - - - - minichromosome maintenance 10 replication initiation factor [Source:ZFIN;Acc:ZDB-GENE-041210-42]
73. srebf2 ENSDARG00000063438 1982 0.781 - 0.781 - - - - - - - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
74. psd3l ENSDARG00000104820 1201 0.78 - - - - - 0.780 - - - pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
75. slc3a1 ENSDARG00000017165 136 0.78 - - - - - - 0.780 - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
76. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 0.78 - - - - - - 0.780 - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
77. tfpia ENSDARG00000034718 1257 0.78 - 0.780 - - - - - - - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
78. chka ENSDARG00000041078, ENSDARG00000115973 468 0.779 - 0.779 - - - - - - - choline kinase alpha [Source:ZFIN;Acc:ZDB-GENE-050208-149]
79. c1qtnf9 ENSDARG00000058318, ENSDARG00000112904 1274 0.778 - 0.778 - - - - - - - C1q and TNF related 9 [Source:ZFIN;Acc:ZDB-GENE-080303-33]
80. FAM53C FAM53C 769 0.777 - 0.777 - - - - - - -
81. slc20a1a ENSDARG00000020114, ENSDARG00000113616 503 0.777 - 0.777 - - - - - - - solute carrier family 20, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2217]
82. nf2a ENSDARG00000020204 740 0.775 - 0.775 - - - - - - - neurofibromin 2a (merlin) [Source:ZFIN;Acc:ZDB-GENE-080722-7]
83. rnf216 ENSDARG00000087893 518 0.775 - 0.775 - - - - - - - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
84. gtf2h5 ENSDARG00000056099, ENSDARG00000114297 1331 0.774 0.774 - - - - - - - - general transcription factor IIH, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-041001-144]
85. slc10a4 ENSDARG00000009131 51 0.774 - 0.774 - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
86. med25 ENSDARG00000038005, ENSDARG00000115713 1305 0.772 - 0.772 - - - - - - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
87. tceb1a 969 0.772 - 0.772 - - - - - - - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
88. tubgcp2 ENSDARG00000013079 1520 0.772 0.772 - - - - - - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
89. mafba ENSDARG00000017121 1215 0.772 - 0.772 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ba [Source:ZFIN;Acc:ZDB-GENE-980526-515]
90. dhps ENSDARG00000003270 827 0.772 - 0.772 - - - - - - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
91. slc22a15 ENSDARG00000055445 188 0.771 0.771 - - - - - - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
92. si:ch211-125e6.8 ENSDARG00000094518 538 0.771 - - - - - - 0.771 - - si:ch211-125e6.8 [Source:ZFIN;Acc:ZDB-GENE-070912-42]
93. pms1 ENSDARG00000000476 105 0.771 - 0.771 - - - - - - - PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]
94. traip ENSDARG00000011262 410 0.771 - - - - - - 0.771 - - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
95. guf1 ENSDARG00000029088 231 0.77 - 0.770 - - - - - - - GUF1 homolog, GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-4289]
96. mrpl45 ENSDARG00000044942, ENSDARG00000114416, ENSDARG00000115767 1599 0.768 - 0.768 - - - - - - - mitochondrial ribosomal protein L45 [Source:ZFIN;Acc:ZDB-GENE-040426-1041]
97. cd276 ENSDARG00000003061 2798 0.768 - 0.768 - - - - - - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
98. mntb ENSDARG00000073988 1023 0.767 - 0.767 - - - - - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
99. rbm4.1 ENSDARG00000036386 625 0.766 - 0.766 - - - - - - - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
100. CDH16 ENSDARG00000077570 78 0.766 - 0.766 - - - - - - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]

There are 276 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA