Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cpsf2

Gene Name Gene ID Reads Annotation
cpsf2 ENSDARG00000028971 841 cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]










Genes with expression patterns similar to cpsf2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cpsf2 ENSDARG00000028971 841 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]
2. zc3h18 ENSDARG00000062506 1676 1.87 - - - - - - 0.987 0.883 - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
3. BAHD1 ENSDARG00000086789 1194 1.824 - - - 0.870 - - 0.954 - - bromo adjacent homology domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120411-42]
4. sepn1 801 1.803 0.915 - - - - - - 0.888 - selenoprotein N, 1
5. cux1b ENSDARG00000043134 641 1.794 - - - - - - 0.988 0.806 - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
6. adamts6 ENSDARG00000041982 320 1.751 0.890 - - - - - - 0.861 - ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:ZFIN;Acc:ZDB-GENE-091113-9]
7. prdm4 ENSDARG00000017366 454 1.74 - 0.852 - - - - - 0.888 - PR domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-131]
8. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 1.727 - 0.736 - - - - 0.991 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
9. ZFYVE1 ENSDARG00000078652 631 1.721 - - - - - - 0.986 0.735 - zinc finger, FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131205-1]
10. svopl ENSDARG00000057983, ENSDARG00000116460 975 1.719 - - - - - - 0.951 0.768 - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
11. mrps7 ENSDARG00000101622 889 1.713 - 0.725 - - - - 0.988 - - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
12. dusp2 ENSDARG00000098108 353 1.711 0.739 - - - - - 0.972 - - dual specificity phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-188]
13. slc44a1b ENSDARG00000090982 240 1.703 - 0.812 - - - - - 0.891 - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
14. CTBP1 ENSDARG00000057007, ENSDARG00000115804 2088 1.698 - - - - - - 0.973 0.725 - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
15. ACTN2 ACTN2 343 1.694 - 0.719 - - - - 0.975 - -
16. dhdds ENSDARG00000039851 1135 1.686 - 0.700 - - - - 0.986 - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
17. hsd11b3a hsd11b3a 1388 1.675 0.734 - - - - - 0.941 - -
18. frem1a ENSDARG00000069473 1847 1.671 0.761 - - - - - 0.910 - - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
19. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.67 - 0.702 - - - - 0.968 - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
20. nubp2 ENSDARG00000055653 803 1.667 0.846 - - - - - - 0.821 - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
21. nomo ENSDARG00000078592 4344 1.665 - - - 0.743 - - 0.922 - - nodal modulator [Source:ZFIN;Acc:ZDB-GENE-040826-3]
22. safb ENSDARG00000020467 5608 1.653 - - - - - - 0.934 - 0.719 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
23. gadd45bb ENSDARG00000013576 331 1.649 0.824 - - - - - - 0.825 - growth arrest and DNA-damage-inducible, beta b [Source:ZFIN;Acc:ZDB-GENE-050223-1]
24. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 1.647 - 0.701 - - - - 0.946 - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
25. si:dkey-235d18.5 ENSDARG00000039652 667 1.64 - - - - - - 0.935 0.705 - si:dkey-235d18.5 [Source:ZFIN;Acc:ZDB-GENE-041014-243]
26. CLDN23_1 CLDN23_1 198 1.616 0.832 0.784 - - - - - - -
27. CABZ01038494.1 ENSDARG00000088258 908 1.61 0.893 0.717 - - - - - - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
28. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 1.606 0.711 - - - - - 0.895 - - Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
29. spsb4b ENSDARG00000040538 372 1.593 0.841 - - - - - - 0.752 - splA/ryanodine receptor domain and SOCS box containing 4b [Source:ZFIN;Acc:ZDB-GENE-040801-213]
30. C10H21orf59 275 1.566 - - - 0.721 - - - 0.845 - c10h21orf59 homolog (H. sapiens)
31. fkbp10a ENSDARG00000099183 314 1.557 - - - 0.735 - - - 0.822 - FK506 binding protein 10a [Source:ZFIN;Acc:ZDB-GENE-100921-75]
32. senp3a ENSDARG00000095538, ENSDARG00000116812 2292 1.533 - 0.833 - - - - - - 0.700 SUMO specific peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2303]
33. RLIM ENSDARG00000079306 514 1.524 - 0.716 - - - 0.808 - - - ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]
34. cdk5rap3 ENSDARG00000045092, ENSDARG00000115530 717 1.522 - 0.788 - 0.734 - - - - - CDK5 regulatory subunit associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040625-90]
35. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.518 0.801 - - 0.717 - - - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
36. cnih cnih 8292 1.513 - - - 0.701 - - 0.812 - -
37. srrt ENSDARG00000017762, ENSDARG00000114824 2158 1.51 - - - - - - - 0.763 0.747 serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
38. ankrd46a ENSDARG00000044328 482 1.483 - 0.722 - - - 0.761 - - - ankyrin repeat domain 46a [Source:ZFIN;Acc:ZDB-GENE-030131-2643]
39. fam195b 1159 1.464 - - - 0.758 - - - 0.706 - family with sequence similarity 195, member B
40. xrn2 ENSDARG00000101900 2875 1.447 - 0.737 - - - - - - 0.710 5'-3' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2874]
41. RIBC2 ENSDARG00000075177 445 1.436 - - - - - 0.707 - 0.729 - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
42. nelfa ENSDARG00000061411, ENSDARG00000116904 581 0.996 - - - - - - 0.996 - - negative elongation factor complex member A [Source:ZFIN;Acc:ZDB-GENE-030131-6400]
43. actr10 ENSDARG00000038432 1598 0.994 - - - - - - 0.994 - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
44. zdhhc3 zdhhc3 152 0.994 - - - - - - 0.994 - -
45. nrg2a ENSDARG00000077818 854 0.994 - - - - - - 0.994 - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
46. rac3b ENSDARG00000020795 1523 0.993 - - - - - - 0.993 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
47. slc35b3 ENSDARG00000045437 370 0.993 - - - - - - 0.993 - - solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 [Source:ZFIN;Acc:ZDB-GENE-060312-46]
48. dennd5b ENSDARG00000003789 1152 0.993 - - - - - - 0.993 - - DENN/MADD domain containing 5B [Source:ZFIN;Acc:ZDB-GENE-030131-2248]
49. PRKD3 ENSDARG00000079967 192 0.993 - - - - - - 0.993 - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
50. ZNF337_10 ZNF337_10 183 0.993 - - - - - - 0.993 - -
51. PDZD8 ENSDARG00000088699 844 0.993 - - - - - - 0.993 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
52. PSD PSD 367 0.993 - - - - - - 0.993 - -
53. armc1l ENSDARG00000020887 1219 0.992 - - - - - - 0.992 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
54. si:ch211-198d23.1 ENSDARG00000092574 104 0.992 - - - - - - 0.992 - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
55. NTAN1 ENSDARG00000105182 844 0.992 - - - - - - 0.992 - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
56. bin2b ENSDARG00000010255 2649 0.992 - - - - - - 0.992 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
57. SLITRK6 ENSDARG00000098769 217 0.992 - - - - - - 0.992 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
58. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.992 - - - - - - 0.992 - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
59. mpdu1b ENSDARG00000040265 1968 0.992 - - - - - - 0.992 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
60. sult3st1 ENSDARG00000009885 218 0.992 - - - - - - 0.992 - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
61. unk ENSDARG00000000935 353 0.992 - - - - - - 0.992 - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
62. PRR5 PRR5 630 0.992 - - - - - - 0.992 - -
63. TMEM184B TMEM184B 1280 0.992 - - - - - - 0.992 - -
64. znf687a ENSDARG00000102774 393 0.992 - - - - - - 0.992 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
65. si:ch211-51o18.2 si:ch211-51o18.2 111 0.992 - - - - - - 0.992 - -
66. ERRFI1 ERRFI1 664 0.992 - - - - - - 0.992 - -
67. zgc:63691 zgc:63691 180 0.991 - - - - - - 0.991 - -
68. PLXNB2 PLXNB2 99 0.991 - - - - - - 0.991 - -
69. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 0.991 - - - - - - 0.991 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
70. asb6 ENSDARG00000007125 389 0.991 - - - - - - 0.991 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
71. prkaa1 ENSDARG00000060596 1448 0.991 - - - - - - 0.991 - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030325-1]
72. socs3a ENSDARG00000025428 349 0.991 - - - - - - 0.991 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
73. si:ch73-108h4.3 si:ch73-108h4.3 193 0.991 - - - - - - 0.991 - -
74. baz2a ENSDARG00000102974 266 0.991 - - - - - - 0.991 - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
75. ICT1 356 0.991 - - - - - - 0.991 - - immature colon carcinoma transcript 1
76. plxna4 ENSDARG00000019328 782 0.991 - - - - - - 0.991 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
77. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.991 - - - - - - 0.991 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
78. zgc:173962 zgc:173962 67 0.991 - - - - - - 0.991 - -
79. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.991 - - - - - - 0.991 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
80. tmco3 ENSDARG00000075108 368 0.991 - - - - - - 0.991 - - transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]
81. smurf1 ENSDARG00000016086 878 0.991 - - - - - - 0.991 - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
82. BX324179.3 BX324179.3 326 0.991 - - - - - - 0.991 - -
83. lppr4a lppr4a 141 0.991 - - - - - - 0.991 - -
84. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 0.99 - - - - - - 0.990 - - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
85. VPS37C ENSDARG00000031836 906 0.99 - - - - - - 0.990 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
86. asb3 ENSDARG00000005246 317 0.99 - - - - - - 0.990 - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
87. mob2b ENSDARG00000012005 395 0.99 - - - - - - 0.990 - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
88. ABI3_1 ABI3_1 511 0.99 - - - - - - 0.990 - -
89. COL13A1 1565 0.99 - - - - - - 0.990 - - collagen, type XIII, alpha 1, transcript variant X1
90. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.99 - - - - - - 0.990 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
91. prdm5 ENSDARG00000006288 472 0.99 - - - - - - 0.990 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
92. FBXO31 ENSDARG00000062195 753 0.99 - - - - - - 0.990 - - F-box protein 31 [Source:ZFIN;Acc:ZDB-GENE-070628-4]
93. dnajb9a ENSDARG00000052072 578 0.99 - - - - - - 0.990 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
94. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 0.99 - - - - - - 0.990 - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
95. plekhh1 ENSDARG00000053835 2123 0.99 - - - - - - 0.990 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
96. irf8 ENSDARG00000056407 85 0.99 - - - - - - 0.990 - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
97. esyt3 ENSDARG00000006422 335 0.99 - - - - - - 0.990 - - extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
98. nhp2l1a nhp2l1a 993 0.99 - - - - - - 0.990 - -
99. igfbp3 ENSDARG00000099144 269 0.99 - - - - - - 0.990 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
100. zgc:162612 ENSDARG00000079699 244 0.99 - - - - - - 0.990 - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]

There are 1216 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA