Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cps1

Gene Name Gene ID Reads Annotation
cps1 ENSDARG00000020028 67 carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]










Genes with expression patterns similar to cps1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cps1 ENSDARG00000020028 67 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
2. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 4.438 - - 0.733 0.944 0.923 - - 0.858 0.980 lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
3. mipa ENSDARG00000037285, ENSDARG00000116133 507 4.417 - - 0.729 0.930 0.805 - - 0.955 0.998 major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
4. cryba2a ENSDARG00000030349 1342 4.408 - - 0.724 0.913 0.906 - - 0.944 0.921 crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
5. lim2.4 ENSDARG00000015445 791 4.381 - - 0.748 0.885 0.842 - - 0.932 0.974 lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
6. cryba1l1 ENSDARG00000032929 1868 4.32 - - 0.751 0.873 0.841 - - 0.910 0.945 crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
7. crygmx ENSDARG00000053862 482 4.299 - - 0.760 0.900 0.857 - - 0.787 0.995 crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
8. cx23 ENSDARG00000054150 115 4.276 - - 0.726 0.891 0.781 - - 0.945 0.933 connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
9. mipb ENSDARG00000013963 753 4.27 - - 0.734 0.941 0.715 - - 0.901 0.979 major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
10. prox2 ENSDARG00000041952, ENSDARG00000117137 112 4.256 - - 0.733 0.861 0.849 - - 0.851 0.962 prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
11. crygm2d10 ENSDARG00000087765 358 4.252 - - 0.743 0.867 0.827 - - 0.903 0.912 crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
12. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 4.109 - - 0.728 0.825 0.910 - - 0.845 0.801 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
13. crybb1 ENSDARG00000068507 2255 4.064 - - 0.804 0.839 0.875 - - 0.841 0.705 crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
14. crybb1l2 ENSDARG00000016793 723 4.02 - - 0.766 0.778 0.793 - - 0.892 0.791 crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
15. cx44.1 cx44.1 799 3.731 - - - 0.954 0.859 - - 0.939 0.979
16. cryba1l2 ENSDARG00000014803 47 3.59 - - - 0.944 0.733 - - 0.930 0.983 crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
17. lim2.3 ENSDARG00000037402 302 3.551 - - - 0.932 0.892 - - 0.869 0.858 lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
18. zgc:110053 zgc:110053 69 3.501 - - 0.781 0.849 - - - 0.902 0.969
19. crygm2d16 ENSDARG00000076790 129 3.48 - - 0.722 0.876 - - - 0.894 0.988 crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
20. cryba2b ENSDARG00000041925 4329 3.458 - - 0.801 0.900 0.796 - - 0.961 - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
21. crybb1l1 ENSDARG00000007576 1020 3.423 - - 0.705 - 0.834 - - 0.914 0.970 crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
22. zgc:86723 zgc:86723 299 3.39 - - 0.704 0.794 - - - 0.897 0.995
23. grifin ENSDARG00000033382 141 3.38 - - 0.717 0.747 - - - 0.931 0.985 galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
24. crygm2d4 ENSDARG00000087164, ENSDARG00000115295 138 3.375 - - - 0.769 0.734 - - 0.894 0.978 crystallin, gamma M2d4 [Source:ZFIN;Acc:ZDB-GENE-060918-3]
25. si:ch211-212n6.16 si:ch211-212n6.16 314 3.359 - - 0.701 0.819 - - - 0.939 0.900
26. cryba4 ENSDARG00000024548 111 3.358 - - - 0.757 0.778 - - 0.836 0.987 crystallin, beta A4 [Source:ZFIN;Acc:ZDB-GENE-050522-143]
27. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 3.347 - - 0.741 0.798 - - - 0.882 0.926 crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
28. crygn2 ENSDARG00000030411 2551 3.288 - - 0.722 0.754 0.824 - - - 0.988 crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
29. CU929052.1 CU929052.1 642 3.285 - - 0.720 0.897 0.847 - - 0.821 -
30. cryba1b ENSDARG00000053875 3256 3.279 - - 0.772 0.790 - - - 0.738 0.979 crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
31. crygm2d5 ENSDARG00000069792 207 3.136 - - 0.713 0.706 - - - 0.952 0.765 crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
32. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 3.089 - - 0.746 0.758 0.798 - - - 0.787 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
33. si:ch211-212n6.18 si:ch211-212n6.18 233 2.809 - - - 0.875 - - - 0.946 0.988
34. capn3a ENSDARG00000041864 89 2.782 - - - 0.869 - - - 0.917 0.996 calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
35. crygm2d1 ENSDARG00000087324 258 2.762 - - - 0.898 - - - 0.874 0.990 crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
36. zgc:165347_1 zgc:165347_1 69 2.76 - - - 0.910 - - - 0.868 0.982
37. si:ch211-145g9.7 32 2.742 - - - 0.814 0.951 - - - 0.977 si:ch211-145g9.7, transcript variant X1
38. crygm2d6 ENSDARG00000073874 38 2.713 - - - 0.779 - - - 0.942 0.992 crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
39. crygmxl2 ENSDARG00000074001 282 2.706 - - - 0.939 - - - 0.911 0.856 crystallin, gamma MX, like 2 [Source:ZFIN;Acc:ZDB-GENE-050522-401]
40. crygm2d9 ENSDARG00000115701 28 2.701 - - - 0.901 - - - 0.840 0.960 crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
41. nrl ENSDARG00000100466 41 2.678 - - 0.783 - 0.919 - - - 0.976 neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
42. cx50.5 cx50.5 15 2.628 - - - 0.859 - - - 0.801 0.968
43. crygm2d14 ENSDARG00000087301 66 2.615 - - - - 0.815 - - 0.813 0.987 crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
44. fabp11b ENSDARG00000002311 354 2.603 - - 0.808 0.869 0.926 - - - - fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
45. zgc:162402 zgc:162402 298 2.602 - - - 0.812 - - - 0.926 0.864
46. si:ch211-274p24.3 si:ch211-274p24.3 72 2.581 - - - - 0.896 - - 0.811 0.874
47. crygm2d3 ENSDARG00000088823 1560 2.546 - - 0.735 0.874 - - - 0.937 - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
48. crybb1l3 ENSDARG00000007655 33 2.51 - - 0.765 - - - - 0.773 0.972 crystallin, beta B1, like 3 [Source:ZFIN;Acc:ZDB-GENE-070820-11]
49. ahr1b ENSDARG00000023537 44 2.49 - - 0.714 - 0.927 - - 0.849 - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
50. crygm2d13 ENSDARG00000057460 1093 2.46 - - - 0.827 0.742 - - 0.891 - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
51. si:ch211-152c2.3 ENSDARG00000045898 3448 2.444 - - 0.748 0.829 0.867 - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
52. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 2.432 - - 0.792 0.714 0.926 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
53. dnase1l3l dnase1l3l 16 2.429 - - 0.733 - - - - 0.706 0.990
54. zgc:165347 zgc:165347 1358 2.415 - - 0.739 0.756 - - - 0.920 -
55. cryba1a ENSDARG00000041141 8 2.414 - - 0.733 0.716 - - - - 0.965 crystallin, beta A1a [Source:ZFIN;Acc:ZDB-GENE-040718-107]
56. crygmxl1 ENSDARG00000018797 7 2.414 - - - 0.714 - - - 0.722 0.978 crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
57. pmelb ENSDARG00000033760 206 2.403 - - - - 0.856 - - 0.820 0.727 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
58. crygm2d8 ENSDARG00000116164 698 1.92 - - - - - - - 0.931 0.989 crystallin, gamma M2d8 [Source:ZFIN;Acc:ZDB-GENE-040718-321]
59. otc ENSDARG00000062147 95 1.902 - - - - - - - 0.945 0.957 ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
60. cryaa ENSDARG00000053502, ENSDARG00000113469 80 1.884 - - - - - - - 0.900 0.984 crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
61. foxq2 ENSDARG00000071394 3 1.867 - - - - - - - 0.892 0.975 forkhead box Q2 [Source:ZFIN;Acc:ZDB-GENE-050208-663]
62. crygm2d15 ENSDARG00000069826 48 1.844 - - - - - - - 0.881 0.963 crystallin, gamma M2d15 [Source:ZFIN;Acc:ZDB-GENE-040718-322]
63. lctla ENSDARG00000036139, ENSDARG00000116316 32 1.793 - - - - - - - 0.818 0.975 lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]
64. ggt1a ENSDARG00000023526 26 1.767 - - - - - - - 0.788 0.979 gamma-glutamyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1388]
65. lgsn ENSDARG00000007715 8 1.758 - - - - - - - 0.787 0.971 lengsin, lens protein with glutamine synthetase domain [Source:ZFIN;Acc:ZDB-GENE-060312-26]
66. si:ch211-219a15.3 ENSDARG00000087659 12 1.72 - - - - - - - 0.778 0.942 si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
67. CCDC88A_1 CCDC88A_1 12 1.696 - - - - - - - 0.859 0.837
68. sparcl1 ENSDARG00000074989 80 1.69 - - - - - - - 0.898 0.792 SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
69. crygm2d7 ENSDARG00000076572, ENSDARG00000116634 229 1.679 - - - 0.858 - - - 0.821 - crystallin, gamma M2d7 [Source:ZFIN;Acc:ZDB-GENE-060918-5]
70. vsx2 ENSDARG00000005574 102 1.677 - - 0.786 0.891 - - - - - visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
71. si:dkey-34f9.3 ENSDARG00000077813 3 1.668 - - - - - - - 0.824 0.844 si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]
72. lim2.5 ENSDARG00000041295 56 1.665 - - - - - - - 0.791 0.874 lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]
73. pax6l pax6l 54 1.659 - - - - - - - 0.885 0.774
74. lctlb ENSDARG00000016337 35 1.649 - - - - - - - 0.821 0.828 lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
75. nkx2.1b nkx2.1b 125 1.626 - - - - - - - 0.840 0.786
76. defbl1 ENSDARG00000075161 211 1.616 - - 0.786 - - - - 0.830 - defensin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-070207-1]
77. fip1l1a ENSDARG00000043328 7 1.607 - - - 0.744 - - - - 0.863 FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
78. si:dkey-21o19.2 ENSDARG00000088900 52 1.6 - - - - - - - 0.900 0.700 si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
79. sept4a ENSDARG00000010385 75 1.583 - - - 0.778 - - - 0.805 - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
80. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.577 - - - - - - - 0.819 0.758 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
81. pitx3 ENSDARG00000070069 363 1.572 - - - 0.747 0.825 - - - - paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
82. npvf ENSDARG00000036227 23 1.56 - - - - - - - 0.722 0.838 neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
83. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.558 - - - - - - - 0.828 0.730 zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
84. crygm2f ENSDARG00000078134, ENSDARG00000112285 2 1.558 - - - 0.714 - - - - 0.844 crystallin, gamma M2f [Source:ZFIN;Acc:ZDB-GENE-080220-17]
85. PEG3_13 PEG3_13 5 1.558 - - - 0.714 - - - - 0.844
86. irgq2 ENSDARG00000068657 4 1.558 - - - 0.714 - - - - 0.844 immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
87. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1.555 - - - 0.786 - - - 0.769 - solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
88. CR391967.1 CR391967.1 135 1.554 - - - - - - - 0.816 0.738
89. pax6a ENSDARG00000103379 3061 1.547 - - - - 0.740 - - 0.807 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
90. prdm1b ENSDARG00000098925 440 1.542 - - - 0.762 0.780 - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
91. slc6a1a ENSDARG00000045944 260 1.539 - - - 0.742 - - - 0.797 - solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
92. pvalb5 ENSDARG00000032836 242 1.532 - - - 0.806 0.726 - - - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
93. RBM33_1 RBM33_1 7 1.515 - - - - - - - 0.722 0.793
94. efcab4bb efcab4bb 27 1.45 - - 0.729 - 0.721 - - - -
95. cspg5b ENSDARG00000099793 67 1.449 - - - - - - - 0.738 0.711 chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
96. ydjc ENSDARG00000062655 5 1.449 - - - - 0.727 - - 0.722 - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
97. si:zfos-44h1.1 si:zfos-44h1.1 1 1.436 - - - 0.714 - - - 0.722 -
98. rx2 ENSDARG00000040321 112 1.412 - - - 0.709 - - - 0.703 - retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
99. mcm5_1 ENSDARG00000019507 10 0.987 - - - - - - - - 0.987 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
100. ulk3 ENSDARG00000101661 69 0.983 - - - - - - - - 0.983 unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]

There are 436 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA