Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cpm

Gene Name Gene ID Reads Annotation
cpm ENSDARG00000011769, ENSDARG00000113736 1113 carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]










Genes with expression patterns similar to cpm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cpm ENSDARG00000011769, ENSDARG00000113736 1113 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
2. wnt5b ENSDARG00000102464 1662 2.569 - - 0.978 - - 0.818 0.773 - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
3. MSR1 MSR1 449 2.467 - 0.779 0.942 - - 0.746 - - -
4. fn1 fn1 2538 2.429 - 0.729 0.947 - - - 0.753 - -
5. fdps ENSDARG00000040890 4000 2.416 - 0.883 0.820 - - - 0.713 - - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
6. zgc:154018 zgc:154018 362 2.34 - 0.721 - - - 0.836 0.783 - -
7. cmbl ENSDARG00000073786 456 2.299 - 0.745 - - - 0.812 0.742 - - carboxymethylenebutenolidase homolog (Pseudomonas) [Source:ZFIN;Acc:ZDB-GENE-071004-21]
8. LPHN1 LPHN1 152 2.161 - 0.712 - - - 0.744 0.705 - -
9. PLA2G3_1 PLA2G3_1 411 1.8 - 0.822 0.978 - - - - - -
10. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 1.783 - - 0.975 - - - 0.808 - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
11. SPDL1 ENSDARG00000103996, ENSDARG00000109617 1473 1.781 - - 0.782 - - - - - 0.999 spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]
12. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.772 - 0.888 0.884 - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
13. sqrdl 1598 1.756 - 0.814 0.942 - - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
14. igfbp5b ENSDARG00000025348 3803 1.732 - - 0.737 - - - - - 0.995 insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
15. asap2b ENSDARG00000019564 1660 1.723 - - 0.928 - - 0.795 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
16. rnf114 ENSDARG00000009886 725 1.721 - 0.760 0.961 - - - - - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
17. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 1.71 - - - - - 0.711 - - 0.999 carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
18. hsd17b14 ENSDARG00000054842 1394 1.703 - - 0.937 - - - 0.766 - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
19. slc47a1 ENSDARG00000046012 1426 1.69 - 0.813 0.877 - - - - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
20. C3H16orf58 C3H16orf58 487 1.68 - 0.707 0.973 - - - - - -
21. layna ENSDARG00000035169 515 1.672 - 0.718 0.954 - - - - - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
22. gstal gstal 1865 1.645 - 0.813 - - - 0.832 - - -
23. MAL2 ENSDARG00000077637 152 1.638 0.837 - - - - - - 0.801 - mal, T cell differentiation protein 2 (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-081022-204]
24. ugt1ab 545 1.617 - - - - - 0.831 0.786 - - UDP glucuronosyltransferase 1 family a, b
25. pvrl2l ENSDARG00000063390 1112 1.609 - 0.797 - - - 0.812 - - - poliovirus receptor-related 2 like [Source:ZFIN;Acc:ZDB-GENE-060503-249]
26. SPG21 ENSDARG00000007760 645 1.605 - 0.893 - - - - 0.712 - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
27. fn1b ENSDARG00000006526 9542 1.603 - 0.780 0.823 - - - - - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
28. ugdh ENSDARG00000019838, ENSDARG00000110018 1330 1.592 - 0.789 0.803 - - - - - - UDP-glucose 6-dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-011022-1]
29. si:dkey-30c15.13 ENSDARG00000069524, ENSDARG00000114258 403 1.582 - 0.856 - - - 0.726 - - - si:dkey-30c15.13 [Source:ZFIN;Acc:ZDB-GENE-060503-73]
30. col14a1a ENSDARG00000005762 4778 1.571 0.717 - 0.854 - - - - - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
31. tnks tnks 1695 1.57 - 0.765 0.805 - - - - - -
32. PCOLCE_1 PCOLCE_1 2148 1.559 - 0.815 - - - - 0.744 - -
33. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 1.556 - 0.755 - - 0.801 - - - -
34. APOD APOD 3404 1.554 - 0.754 0.800 - - - - - -
35. acer1 ENSDARG00000010347 101 1.543 0.797 - - - - - 0.746 - - alkaline ceramidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-70]
36. TBC1D8B ENSDARG00000062192 1031 1.542 - - - - - 0.811 0.731 - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
37. pfas ENSDARG00000003750 296 1.539 - 0.820 - - - 0.719 - - - phosphoribosylformylglycinamidine synthase [Source:ZFIN;Acc:ZDB-GENE-030131-4420]
38. ahcyl1 ENSDARG00000056331 1765 1.537 - 0.763 - - - 0.774 - - - adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
39. gpr137 ENSDARG00000037244 801 1.533 - - - - - 0.812 - 0.721 - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
40. zgc:92360 ENSDARG00000038151 2161 1.531 - 0.792 - - - 0.739 - - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
41. triqk ENSDARG00000076296 1274 1.523 - 0.723 - - - - 0.800 - - triple QxxK/R motif containing [Source:ZFIN;Acc:ZDB-GENE-070705-75]
42. MCUR1 MCUR1 786 1.518 - 0.739 - - - 0.779 - - -
43. KRT222 ENSDARG00000071518 767 1.517 - 0.730 - - - 0.787 - - - keratin 222 [Source:ZFIN;Acc:ZDB-GENE-070912-343]
44. CU929307.1 ENSDARG00000102297 900 1.516 - 0.737 - - - - 0.779 - -
45. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.516 0.728 - - - - - - 0.788 - zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
46. synj2bp ENSDARG00000028321 1143 1.512 - 0.779 - - - - 0.733 - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
47. hdac4 ENSDARG00000098349 1370 1.492 - - - - - - 0.737 0.755 - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
48. lmna ENSDARG00000013415 1562 1.485 0.723 - - - - - 0.762 - - lamin A [Source:ZFIN;Acc:ZDB-GENE-020424-3]
49. RFWD3 ENSDARG00000087752 167 1.484 0.750 - - - - - 0.734 - - ring finger and WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-120529-1]
50. dgkaa ENSDARG00000060626, ENSDARG00000110977 2315 1.48 - 0.754 - - - - 0.726 - - diacylglycerol kinase, alpha a [Source:ZFIN;Acc:ZDB-GENE-060616-305]
51. epdl1 ENSDARG00000076386 1747 1.477 - - - - - 0.767 - 0.710 - ependymin-like 1 [Source:ZFIN;Acc:ZDB-GENE-090710-3]
52. FP928982.1 FP928982.1 690 1.465 - - - - - - 0.739 0.726 -
53. FOXO1 FOXO1 85 1.462 - 0.755 - - - 0.707 - - -
54. BX571715.2 BX571715.2 1316 1.455 - 0.702 - - - - 0.753 - -
55. nubp2 ENSDARG00000055653 803 1.446 0.731 - - - - 0.715 - - - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
56. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 1.44 - - - - - 0.701 - 0.739 - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
57. RHBDF1 RHBDF1 131 1.437 - 0.736 - - - - - 0.701 -
58. tmem115 ENSDARG00000055763 1824 1.422 - 0.717 - - - - - 0.705 - transmembrane protein 115 [Source:ZFIN;Acc:ZDB-GENE-050913-157]
59. TRIM65 ENSDARG00000077098 991 1 - - - - - - - - 1.000 tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
60. jam3a ENSDARG00000114589 630 1 - - - - - - - - 1.000 junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
61. polr3k ENSDARG00000037835 1552 1 - - - - - - - - 1.000 polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
62. cdk5r1b ENSDARG00000045087 2075 0.999 - - - - - - - - 0.999 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
63. mtmr9 ENSDARG00000015860 1339 0.999 - - - - - - - - 0.999 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
64. agpat9 agpat9 938 0.999 - - - - - - - - 0.999
65. tmed7 ENSDARG00000046022 2435 0.999 - - - - - - - - 0.999 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
66. zgc:162967 zgc:162967 2132 0.999 - - - - - - - - 0.999
67. gltscr1 gltscr1 1487 0.999 - - - - - - - - 0.999
68. NRD1 NRD1 3486 0.999 - - - - - - - - 0.999
69. hddc3 ENSDARG00000020473 2814 0.999 - - - - - - - - 0.999 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
70. serpinb1 ENSDARG00000055416 1320 0.999 - - - - - - - - 0.999 serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
71. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 0.999 - - - - - - - - 0.999 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
72. BX296557.2 BX296557.2 1083 0.999 - - - - - - - - 0.999
73. smyd5 ENSDARG00000071669 1194 0.999 - - - - - - - - 0.999 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
74. acbd6 ENSDARG00000039456 2355 0.999 - - - - - - - - 0.999 acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
75. jam2b ENSDARG00000079071 1031 0.999 - - - - - - - - 0.999 junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
76. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.999 - - - - - - - - 0.999 aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
77. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.999 - - - - - - - - 0.999 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
78. tsen2 ENSDARG00000091851 1467 0.999 - - - - - - - - 0.999 TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
79. C24H7orf50 1417 0.999 - - - - - - - - 0.999 chromosome 24 C7orf50 homolog, transcript variant X2
80. spag1a ENSDARG00000004017 1140 0.999 - - - - - - - - 0.999 sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
81. NDST1 NDST1 1584 0.999 - - - - - - - - 0.999
82. vsnl1a ENSDARG00000023228 1584 0.998 - - - - - - - - 0.998 visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
83. gata3 ENSDARG00000016526 1857 0.998 - - - - - - - - 0.998 GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
84. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.998 - - - - - - - - 0.998 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
85. nup155 ENSDARG00000001777 3417 0.998 - - - - - - - - 0.998 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
86. kbtbd12 ENSDARG00000001882 1196 0.998 - - - - - - - - 0.998 kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
87. cnrip1a ENSDARG00000091683 1491 0.998 - - - - - - - - 0.998 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
88. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 0.998 - - - - - - - - 0.998 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
89. BX957337.1 BX957337.1 1685 0.997 - - - - - - - - 0.997
90. ash1l ENSDARG00000070981 2520 0.997 - - - - - - - - 0.997 ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
91. nup98 ENSDARG00000074955 3998 0.997 - - - - - - - - 0.997 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
92. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 0.997 - - - - - - - - 0.997 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
93. prpf39 ENSDARG00000100209 3721 0.997 - - - - - - - - 0.997 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
94. foxp2 ENSDARG00000005453 1504 0.997 - - - - - - - - 0.997 forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
95. eya2 ENSDARG00000018984 1768 0.996 - - - - - - - - 0.996 EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
96. mier1b ENSDARG00000001447 1680 0.996 - - - - - - - - 0.996 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
97. rnf115 ENSDARG00000062450 1284 0.996 - - - - - - - - 0.996 ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
98. naa15a ENSDARG00000003213 5889 0.994 - - - - - - - - 0.994 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
99. ndufa2 ENSDARG00000021984 4754 0.994 - - - - - - - - 0.994 NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]
100. stip1 ENSDARG00000004906 7742 0.994 - - - - - - - - 0.994 stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]

There are 1199 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA